Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole3_PA, section s44.

Sample reads: 133,391. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16688.22 125108.37
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4057.17 30415.82 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. he1a 1488.91 11162.07 hatching enzyme 1a, transcript variant X1
4. apoc1l apoc1l 1472.25 11037.17
5. apoa1b ENSDARG00000101324 1458.47 10933.87 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
6. apobb apobb 1371.73 10283.60
7. zgc:161979_1 zgc:161979_1 1295.33 9710.84
8. ctslb ENSDARG00000039173, ENSDARG00000074306 1154.02 8651.47 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
9. mt-nd2 ENSDARG00000063899 1036.84 7772.99 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
10. apoeb ENSDARG00000040295 1027.65 7704.09 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
11. apoa2 ENSDARG00000015866 1023.05 7669.61 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
12. mt-nd4 ENSDARG00000063917 971.93 7286.37 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. zgc:174855 ENSDARG00000094559 969.06 7264.86 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
14. tmsb4x ENSDARG00000077777 967.33 7251.89 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
15. actb2 ENSDARG00000037870 936.89 7023.68 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. apoa1a ENSDARG00000012076, ENSDARG00000110395 871.40 6532.72 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
17. zgc:161979 zgc:161979 869.68 6519.82
18. mt-co2 ENSDARG00000063908 785.24 5886.79 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
19. tpma ENSDARG00000033683 768.58 5761.90 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
20. hbbe3 ENSDARG00000038147, ENSDARG00000109344 757.67 5680.11 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
21. CABZ01044814.2 CABZ01044814.2 723.78 5426.04
22. mt-co3 ENSDARG00000063912 693.91 5202.11 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
23. mt-atp6 ENSDARG00000063911 675.52 5064.24 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
24. si:dkey-151g10.6 si:dkey-151g10.6 637.04 4775.77
25. wu:fb37b09 wu:fb37b09 627.85 4706.87
26. eef1a1l1 ENSDARG00000020850 581.32 4358.04 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
27. wu:fa26c03 581.32 4358.04 wu:fa26c03
28. bhmt ENSDARG00000013430 539.96 4047.98 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
29. si:dkey-269i1.3 538.81 4039.35 si:dkey-269i1.3
30. ckma ENSDARG00000035327, ENSDARG00000114671 533.64 4000.60 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
31. atp2a1 ENSDARG00000020574 521.58 3910.18 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
32. fabp2 ENSDARG00000006427, ENSDARG00000110230 518.13 3884.32 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
33. hbae3 ENSDARG00000079305 470.45 3526.87 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
34. zgc:153129 zgc:153129 468.16 3509.71
35. zgc:174153 ENSDARG00000079376 466.43 3496.74 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
36. ckmb ENSDARG00000040565 458.39 3436.46 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
37. ppiaa ENSDARG00000009212 453.22 3397.70 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
38. si:dkey-239j18.3 ENSDARG00000089806 453.22 3397.70 si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
39. apoa4 apoa4 442.88 3320.19
40. mt-nd1 ENSDARG00000063895 430.82 3229.77 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
41. ctsla ENSDARG00000007836 415.88 3117.77 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
42. zgc:112425 zgc:112425 414.74 3109.23
43. eef2b ENSDARG00000100371, ENSDARG00000109247 413.59 3100.60 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
44. hspa8 ENSDARG00000068992, ENSDARG00000114726 406.69 3048.88 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
45. actc1b ENSDARG00000099197 399.23 2992.95 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
46. actb1 ENSDARG00000037746, ENSDARG00000113649 394.06 2954.19 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
47. mt-cyb ENSDARG00000063924 386.59 2898.19 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
48. hmga1a ENSDARG00000028335 377.40 2829.30 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
49. si:dkey-26g8.5 ENSDARG00000089750 349.25 2618.26 si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
50. AL935210.1 ENSDARG00000088330 348.68 2613.99 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
51. si:dkey-150i13.2 ENSDARG00000071052 332.02 2489.09 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
52. mylz3 ENSDARG00000017441 323.98 2428.82 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
53. rpl10a ENSDARG00000042905, ENSDARG00000115649 323.40 2424.47 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
54. pabpc1a ENSDARG00000017219 320.53 2402.95 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
55. krt8 ENSDARG00000058358, ENSDARG00000109279 309.62 2321.16 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
56. pvalb2 ENSDARG00000002768, ENSDARG00000114085 267.68 2006.75 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
57. btf3 ENSDARG00000035400, ENSDARG00000116462 263.09 1972.33 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
58. rpl23 ENSDARG00000053457 262.51 1967.99 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
59. rps23 ENSDARG00000021838 255.05 1912.06 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
60. he1b 253.90 1903.44 hatching enzyme 1b
61. rpl8 ENSDARG00000014867 253.32 1899.09 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
62. aldob ENSDARG00000053684 248.73 1864.68 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
63. rpl26 ENSDARG00000102317 245.28 1838.82 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
64. tnnc2 ENSDARG00000070835, ENSDARG00000111155 242.41 1817.30 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
65. ptmab ENSDARG00000101766 239.54 1795.79 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
66. rpl18a ENSDARG00000025073 238.96 1791.44 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
67. si:dkey-269i1.2 si:dkey-269i1.2 230.92 1731.16
68. rpl9 ENSDARG00000037350, ENSDARG00000112384 229.77 1722.54 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
69. hbae1_1 225.17 1688.06 hemoglobin, alpha embryonic 1
70. rpl21 ENSDARG00000010516, ENSDARG00000110263 220.58 1653.65 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
71. rpl36a ENSDARG00000058105, ENSDARG00000112656 217.13 1627.78 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
72. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 214.84 1610.61 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
73. rpl19 ENSDARG00000013307 211.39 1584.75 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
74. eif5a ENSDARG00000017235 210.81 1580.40 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
75. rps26l ENSDARG00000030408 201.62 1511.51 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
76. sepp1a 197.03 1477.10 selenoprotein P, plasma, 1a
77. gatm ENSDARG00000036239 192.43 1442.61 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
78. ttna ttna 189.56 1421.09
79. rplp0 ENSDARG00000051783 186.11 1395.23 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
80. hbbe1.1 ENSDARG00000113599 185.54 1390.96 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
81. fetub ENSDARG00000053973 183.24 1373.71 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
82. slc43a2b ENSDARG00000061120, ENSDARG00000117188 182.09 1365.09 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
83. pla2g12b ENSDARG00000015662 180.94 1356.47 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
84. rpl11 ENSDARG00000043509 180.94 1356.47 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
85. npc2 ENSDARG00000090912 178.65 1339.30 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
86. rps14 ENSDARG00000036629 178.07 1334.96 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
87. zgc:92533 zgc:92533 177.50 1330.68
88. ttnb ttnb 176.35 1322.06
89. rps27a ENSDARG00000032725, ENSDARG00000114059 173.48 1300.55 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
90. mt-co1 ENSDARG00000063905 172.90 1296.20 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
91. apoc2 ENSDARG00000092155 170.03 1274.68 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
92. tfa ENSDARG00000016771 170.03 1274.68 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
93. gamt ENSDARG00000070844, ENSDARG00000109945 168.88 1266.06 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
94. rpl36 ENSDARG00000100588 166.58 1248.82 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
95. rbp4 ENSDARG00000101199 164.86 1235.92 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
96. pvalb9 ENSDARG00000071601, ENSDARG00000113946 164.29 1231.65 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
97. rps2 ENSDARG00000077291 163.71 1227.30 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
98. rpl15 ENSDARG00000009285 162.56 1218.68 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
99. APOB APOB 161.99 1214.41
100. rps6 ENSDARG00000019778 159.12 1192.89 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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