Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_28hpf_whole3_PA, section s26.

Sample reads: 133,411. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 22433.32 168152.06
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2938.16 22023.39 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mt-nd2 ENSDARG00000063899 1694.62 12702.26 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
4. tpma ENSDARG00000033683 1560.18 11694.55 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. mt-nd4 ENSDARG00000063917 1411.59 10580.77 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
6. mt-co2 ENSDARG00000063908 1156.87 8671.48 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. tmsb4x ENSDARG00000077777 1142.72 8565.42 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
8. mt-co3 ENSDARG00000063912 1050.73 7875.89 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
9. si:dkey-151g10.6 si:dkey-151g10.6 1038.35 7783.10
10. ckmb ENSDARG00000040565 1036.58 7769.83 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
11. ckma ENSDARG00000035327, ENSDARG00000114671 1017.12 7623.96 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
12. actc1b ENSDARG00000099197 987.05 7398.57 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
13. mt-atp6 ENSDARG00000063911 974.67 7305.77 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
14. atp2a1 ENSDARG00000020574 817.24 6125.74 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
15. actb2 ENSDARG00000037870 727.02 5449.48 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
16. eef1a1l1 ENSDARG00000020850 689.88 5171.09 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. mylz3 ENSDARG00000017441 629.73 4720.23 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
18. mt-nd1 ENSDARG00000063895 601.43 4508.10 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
19. ppiaa ENSDARG00000009212 564.28 4229.64 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
20. tnnc2 ENSDARG00000070835, ENSDARG00000111155 541.29 4057.31 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
21. hspa8 ENSDARG00000068992, ENSDARG00000114726 530.67 3977.71 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
22. zgc:112425 zgc:112425 505.91 3792.12
23. eef2b ENSDARG00000100371, ENSDARG00000109247 497.06 3725.78 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
24. hmga1a ENSDARG00000028335 489.99 3672.79 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
25. apoa1b ENSDARG00000101324 484.68 3632.99 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
26. zgc:161979_1 zgc:161979_1 452.84 3394.33
27. mt-cyb ENSDARG00000063924 442.23 3314.80 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
28. apoc1l apoc1l 438.69 3288.26
29. btf3 ENSDARG00000035400, ENSDARG00000116462 421.00 3155.66 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
30. myhz1.3 ENSDARG00000067997 390.93 2930.27 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
31. rpl10a ENSDARG00000042905, ENSDARG00000115649 390.93 2930.27 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
32. myl10 ENSDARG00000062592 389.16 2917.00 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
33. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 389.16 2917.00 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
34. ttna ttna 387.39 2903.74
35. actb1 ENSDARG00000037746, ENSDARG00000113649 385.62 2890.47 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
36. acta1a ENSDARG00000036371 382.08 2863.93 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
37. rpl18a ENSDARG00000025073 376.78 2824.21 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
38. zgc:66286 zgc:66286 367.93 2757.87
39. si:dkey-150i13.2 ENSDARG00000071052 364.40 2731.41 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
40. apoeb ENSDARG00000040295 362.63 2718.14 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
41. hsp90aa1.1 ENSDARG00000010478 341.40 2559.01 heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
42. apobb apobb 339.63 2545.74
43. rpl23 ENSDARG00000053457 334.32 2505.94 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
44. apoa2 ENSDARG00000015866 327.25 2452.95 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
45. acta1b ENSDARG00000055618 316.63 2373.34 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
46. rpl8 ENSDARG00000014867 309.56 2320.35 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
47. rps14 ENSDARG00000036629 309.56 2320.35 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
48. myhz2 ENSDARG00000012944 306.02 2293.82 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
49. rpl36a ENSDARG00000058105, ENSDARG00000112656 306.02 2293.82 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
50. rps23 ENSDARG00000021838 304.25 2280.55 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
51. zgc:161979 zgc:161979 302.48 2267.28
52. rpl26 ENSDARG00000102317 290.10 2174.48 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
53. rpl9 ENSDARG00000037350, ENSDARG00000112384 281.26 2108.22 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
54. rps26l ENSDARG00000030408 274.18 2055.15 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
55. rps27a ENSDARG00000032725, ENSDARG00000114059 270.64 2028.62 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
56. ptmab ENSDARG00000101766 268.87 2015.35 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
57. ttnb ttnb 268.87 2015.35
58. rpl11 ENSDARG00000043509 265.34 1988.89 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
59. rps29 ENSDARG00000041232 265.34 1988.89 ribosomal protein S29 [Source:ZFIN;Acc:ZDB-GENE-040622-5]
60. aldoab ENSDARG00000034470 263.57 1975.63 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
61. eif5a ENSDARG00000017235 258.26 1935.82 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
62. rpl21 ENSDARG00000010516, ENSDARG00000110263 256.49 1922.56 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
63. rps20 ENSDARG00000036044 254.72 1909.29 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
64. pabpc1a ENSDARG00000017219 252.95 1896.02 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
65. apoa1a ENSDARG00000012076, ENSDARG00000110395 245.88 1843.03 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
66. fabp3 ENSDARG00000023290 240.57 1803.23 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
67. rps2 ENSDARG00000077291 240.57 1803.23 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
68. rpl15 ENSDARG00000009285 237.03 1776.69 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
69. rpsa ENSDARG00000019181 235.27 1763.50 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
70. tnni2b.1 ENSDARG00000035958 233.50 1750.23 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
71. zgc:153129 zgc:153129 231.73 1736.96
72. rpl5b ENSDARG00000015862, ENSDARG00000109661 229.96 1723.70 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
73. rpl36 ENSDARG00000100588 228.19 1710.43 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
74. rplp1 ENSDARG00000021864 219.34 1644.09 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
75. rplp0 ENSDARG00000051783 217.58 1630.90 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
76. myl1 ENSDARG00000014196 215.81 1617.63 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
77. rps9 ENSDARG00000011405, ENSDARG00000113248 215.81 1617.63 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
78. tnnt3a ENSDARG00000030270 214.04 1604.37 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
79. rps10 ENSDARG00000034897 212.27 1591.10 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
80. tpm3 ENSDARG00000005162 212.27 1591.10 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
81. tnnt2c ENSDARG00000032242 206.96 1551.30 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
82. RPL29 ENSDARG00000077717 203.42 1524.76 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
83. rpl19 ENSDARG00000013307 203.42 1524.76 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
84. rpl27 ENSDARG00000015128 196.35 1471.77 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
85. rps12 ENSDARG00000036875, ENSDARG00000115157 196.35 1471.77 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
86. rps15 ENSDARG00000070849, ENSDARG00000110979 196.35 1471.77 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
87. mt-co1 ENSDARG00000063905 192.81 1445.23 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
88. rps15a ENSDARG00000010160 192.81 1445.23 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
89. si:ch1073-429i10.3 189.27 1418.70 si:ch1073-429i10.3, transcript variant X2
90. rpl6 ENSDARG00000058451 187.50 1405.43 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
91. id1 ENSDARG00000040764 183.97 1378.97 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
92. faua ENSDARG00000099022 175.12 1312.64 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
93. rpl18 ENSDARG00000029533 175.12 1312.64 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
94. ATP5B 173.35 1299.37 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
95. col2a1a ENSDARG00000069093, ENSDARG00000111202 173.35 1299.37 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
96. pvalb2 ENSDARG00000002768, ENSDARG00000114085 173.35 1299.37 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
97. col1a1a ENSDARG00000012405, ENSDARG00000116113 171.58 1286.10 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
98. cd81 cd81 169.82 1272.91
99. rps13 ENSDARG00000036298, ENSDARG00000112818 169.82 1272.91 ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
100. rps5 ENSDARG00000043453 166.28 1246.37 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA