Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s32.

Sample reads: 133,393. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 9687.45 72624.68
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4284.33 32118.68 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2437.55 18273.78 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 2214.70 16603.12
5. tmsb4x ENSDARG00000077777 1958.53 14682.67 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. zgc:161979_1 zgc:161979_1 1784.05 13374.63
7. tpma ENSDARG00000033683 1733.08 12992.52 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
8. zgc:161979 zgc:161979 1629.82 12218.40
9. apoa2 ENSDARG00000015866 1575.58 11811.78 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
10. apobb apobb 1563.82 11723.61
11. mt-nd2 ENSDARG00000063899 1423.32 10670.32 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. apoeb ENSDARG00000040295 1323.33 9920.71 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
13. mt-co2 ENSDARG00000063908 1305.03 9783.52 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
14. ckmb ENSDARG00000040565 1214.85 9107.46 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
15. mt-atp6 ENSDARG00000063911 1214.85 9107.46 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
16. mt-nd4 ENSDARG00000063917 1182.18 8862.54 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. ckma ENSDARG00000035327, ENSDARG00000114671 969.79 7270.30 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
18. atp2a1 ENSDARG00000020574 960.64 7201.71 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
19. mt-co3 ENSDARG00000063912 913.59 6848.98 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
20. apoa4 apoa4 911.63 6834.29
21. mylz3 ENSDARG00000017441 896.60 6721.61 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
22. actb2 ENSDARG00000037870 871.77 6535.47 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
23. apoa1a ENSDARG00000012076, ENSDARG00000110395 847.59 6354.20 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
24. pvalb2 ENSDARG00000002768, ENSDARG00000114085 824.71 6182.67 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
25. actc1b ENSDARG00000099197 766.55 5746.66 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
26. mt-nd1 ENSDARG00000063895 726.04 5442.96 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
27. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 716.89 5374.37 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
28. bhmt ENSDARG00000013430 716.23 5369.42 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
29. mt-cyb ENSDARG00000063924 628.66 4712.93 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
30. eef1a1l1 ENSDARG00000020850 556.13 4169.18 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
31. actb1 ENSDARG00000037746, ENSDARG00000113649 537.18 4027.12 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
32. fabp2 ENSDARG00000006427, ENSDARG00000110230 507.11 3801.69 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
33. tnnc2 ENSDARG00000070835, ENSDARG00000111155 494.04 3703.71 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
34. si:dkey-151g10.6 si:dkey-151g10.6 491.43 3684.14
35. zgc:153129 zgc:153129 482.93 3620.42
36. zgc:92533 zgc:92533 414.97 3110.94
37. ppiaa ENSDARG00000009212 390.79 2929.67 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
38. eef2b ENSDARG00000100371, ENSDARG00000109247 388.18 2910.10 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
39. zgc:112425 zgc:112425 369.23 2768.04
40. acta1b ENSDARG00000055618 356.81 2674.93 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
41. fetub ENSDARG00000053973 335.90 2518.17 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
42. hmga1a ENSDARG00000028335 332.63 2493.65 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
43. gatm ENSDARG00000036239 328.71 2464.27 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
44. rbp4 ENSDARG00000101199 322.17 2415.24 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
45. myhz1.3 ENSDARG00000067997 320.21 2400.54 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
46. cyt1l ENSDARG00000036832 308.45 2312.38 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
47. zgc:113413 zgc:113413 296.03 2219.27
48. pvalb1 ENSDARG00000037789 282.31 2116.42 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
49. si:ch211-226o13.2 282.31 2116.42 si:ch211-226o13.2
50. rpl18a ENSDARG00000025073 280.35 2101.72 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
51. aldoab ENSDARG00000034470 279.70 2096.85 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
52. hspa8 ENSDARG00000068992, ENSDARG00000114726 279.70 2096.85 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
53. rpl10a ENSDARG00000042905, ENSDARG00000115649 279.70 2096.85 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
54. sepp1a 269.24 2018.43 selenoprotein P, plasma, 1a
55. mt-co1 ENSDARG00000063905 266.63 1998.87 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
56. ctsla ENSDARG00000007836 260.09 1949.84 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
57. rpl8 ENSDARG00000014867 256.82 1925.32 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
58. tnnt3a ENSDARG00000030270 253.56 1900.88 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
59. rps27a ENSDARG00000032725, ENSDARG00000114059 243.10 1822.47 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
60. tnnt3b ENSDARG00000068457 243.10 1822.47 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
61. btf3 ENSDARG00000035400, ENSDARG00000116462 241.79 1812.65 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
62. rpl23 ENSDARG00000053457 239.83 1797.95 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
63. tnni2a.4 ENSDARG00000029069 238.53 1788.21 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
64. rps23 ENSDARG00000021838 237.87 1783.26 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
65. myl1 ENSDARG00000014196 234.61 1758.82 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
66. apoc2 ENSDARG00000092155 232.65 1744.13 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
67. pla2g12b ENSDARG00000015662 230.68 1729.36 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
68. rpl21 ENSDARG00000010516, ENSDARG00000110263 220.23 1651.02 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
69. zgc:66286 zgc:66286 220.23 1651.02
70. acta1a ENSDARG00000036371 218.27 1636.32 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
71. rps26l ENSDARG00000030408 217.61 1631.37 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
72. ahcy ENSDARG00000005191 215.00 1611.81 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
73. pvalb9 ENSDARG00000071601, ENSDARG00000113946 209.12 1567.73 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
74. eif5a ENSDARG00000017235 207.16 1553.03 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
75. paics ENSDARG00000033539 206.51 1548.16 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
76. gapdh ENSDARG00000043457 203.89 1528.52 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
77. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 199.97 1499.13 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
78. rpl26 ENSDARG00000102317 199.97 1499.13 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
79. ttna ttna 198.01 1484.44
80. rps2 ENSDARG00000077291 192.78 1445.23 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
81. col1a1b ENSDARG00000035809 192.13 1440.36 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
82. cfl1l ENSDARG00000012972 189.51 1420.71 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
83. rps15 ENSDARG00000070849, ENSDARG00000110979 186.90 1401.15 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
84. rpl11 ENSDARG00000043509 185.59 1391.33 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
85. rpl36a ENSDARG00000058105, ENSDARG00000112656 185.59 1391.33 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
86. rps20 ENSDARG00000036044 182.33 1366.89 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
87. ptmab ENSDARG00000101766 181.02 1357.07 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
88. gamt ENSDARG00000070844, ENSDARG00000109945 180.37 1352.19 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
89. pabpc1a ENSDARG00000017219 180.37 1352.19 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
90. tfa ENSDARG00000016771 179.06 1342.37 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
91. pfn1 ENSDARG00000088091 174.48 1308.04 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
92. rpl19 ENSDARG00000013307 173.83 1303.17 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
93. psap ENSDARG00000013968 173.18 1298.29 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
94. krt8 ENSDARG00000058358, ENSDARG00000109279 169.26 1268.91 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
95. rps14 ENSDARG00000036629 169.26 1268.91 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
96. tpm3 ENSDARG00000005162 169.26 1268.91 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
97. col1a1a ENSDARG00000012405, ENSDARG00000116113 166.64 1249.26 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
98. mylpfb ENSDARG00000002589 166.64 1249.26 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
99. myl10 ENSDARG00000062592 165.99 1244.39 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
100. APOB APOB 162.07 1215.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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