Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_whole2, section s2.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 3962.45 29702.92 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. tmsb4x ENSDARG00000077777 3962.45 29702.92 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
3. RPL29 ENSDARG00000077717 2641.63 19801.92 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
4. mt-co2 ENSDARG00000063908 2641.63 19801.92 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 2641.63 19801.92 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
6. naa35 ENSDARG00000012378 2641.63 19801.92 N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-030131-306]
7. rps20 ENSDARG00000036044 2641.63 19801.92 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
8. rps27a ENSDARG00000032725, ENSDARG00000114059 2641.63 19801.92 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
9. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 2641.63 19801.92 zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
10. AC024175.4 AC024175.4 1320.82 9901.00
11. CABZ01111990.1 CABZ01111990.1 1320.82 9901.00
12. COL2A1 COL2A1 1320.82 9901.00
13. CWC15 ENSDARG00000013382 1320.82 9901.00 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
14. FP016176.1 FP016176.1 1320.82 9901.00
15. LRP3 ENSDARG00000008485 1320.82 9901.00 low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
16. anxa2a ENSDARG00000003216 1320.82 9901.00 annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
17. apoa1b ENSDARG00000101324 1320.82 9901.00 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
18. apoa2 ENSDARG00000015866 1320.82 9901.00 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
19. apoc1l apoc1l 1320.82 9901.00
20. bhmt ENSDARG00000013430 1320.82 9901.00 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
21. calm1b ENSDARG00000034187 1320.82 9901.00 calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
22. cdc14b ENSDARG00000021483 1320.82 9901.00 cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
23. cdc42 ENSDARG00000044573 1320.82 9901.00 cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
24. cfl1 ENSDARG00000021124 1320.82 9901.00 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
25. cnn2 ENSDARG00000035858 1320.82 9901.00 calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
26. cox8a ENSDARG00000095273 1320.82 9901.00 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
27. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 1320.82 9901.00 cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
28. ddrgk1_1 ENSDARG00000037172 1320.82 9901.00 DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
29. dr1 ENSDARG00000105098, ENSDARG00000113528 1320.82 9901.00 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
30. eef1a1l1 ENSDARG00000020850 1320.82 9901.00 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
31. eef1g ENSDARG00000056119 1320.82 9901.00 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
32. ewsr1a ENSDARG00000020258, ENSDARG00000113252 1320.82 9901.00 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
33. fabp2 ENSDARG00000006427, ENSDARG00000110230 1320.82 9901.00 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
34. ftr24 ENSDARG00000008396, ENSDARG00000112253 1320.82 9901.00 finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
35. gng5 ENSDARG00000039830 1320.82 9901.00 guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
36. gorasp1 gorasp1 1320.82 9901.00
37. gpd1b ENSDARG00000043180 1320.82 9901.00 glycerol-3-phosphate dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-3906]
38. hmga1a ENSDARG00000028335 1320.82 9901.00 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
39. hnrnpab hnrnpab 1320.82 9901.00
40. lama2 ENSDARG00000099390 1320.82 9901.00 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
41. ldb3b ENSDARG00000099974 1320.82 9901.00 LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
42. luc7l3 ENSDARG00000014366 1320.82 9901.00 LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
43. mt-co1 ENSDARG00000063905 1320.82 9901.00 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
44. mt-co3 ENSDARG00000063912 1320.82 9901.00 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
45. mt-nd2 ENSDARG00000063899 1320.82 9901.00 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
46. mt-nd3 ENSDARG00000063914 1320.82 9901.00 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
47. ncoa5 ENSDARG00000016345 1320.82 9901.00 nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
48. ncor2 ENSDARG00000000966 1320.82 9901.00 nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
49. nkx6.2 ENSDARG00000104735 1320.82 9901.00 NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
50. otx1a 1320.82 9901.00 orthodenticle homeobox 1a
51. pbx4 ENSDARG00000052150 1320.82 9901.00 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
52. phgdh ENSDARG00000001873 1320.82 9901.00 phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
53. pola2 ENSDARG00000015070 1320.82 9901.00 polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
54. prdx3 ENSDARG00000032102, ENSDARG00000114240 1320.82 9901.00 peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
55. ptmab ENSDARG00000101766 1320.82 9901.00 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
56. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1320.82 9901.00 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
57. ranbp1 ENSDARG00000014817 1320.82 9901.00 RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
58. rbfox1l ENSDARG00000021184, ENSDARG00000111700 1320.82 9901.00 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
59. rpl26 ENSDARG00000102317 1320.82 9901.00 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
60. rpl28 ENSDARG00000005791 1320.82 9901.00 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
61. rpl30 ENSDARG00000035871, ENSDARG00000109253 1320.82 9901.00 ribosomal protein L30 [Source:ZFIN;Acc:ZDB-GENE-030131-8657]
62. rpl34 ENSDARG00000029500 1320.82 9901.00 ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
63. rpl36a ENSDARG00000058105, ENSDARG00000112656 1320.82 9901.00 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
64. rpl39 ENSDARG00000036316, ENSDARG00000117167 1320.82 9901.00 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
65. rplp2 ENSDARG00000101406 1320.82 9901.00 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
66. rplp2l ENSDARG00000011201 1320.82 9901.00 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
67. rps15 ENSDARG00000070849, ENSDARG00000110979 1320.82 9901.00 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
68. rps16 ENSDARG00000045487 1320.82 9901.00 ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
69. rpsa ENSDARG00000019181 1320.82 9901.00 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
70. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 1320.82 9901.00 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
71. s100a10b ENSDARG00000025254 1320.82 9901.00 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
72. sf3a1 ENSDARG00000041887 1320.82 9901.00 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
73. si:ch211-157c3.4 ENSDARG00000087093 1320.82 9901.00 si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
74. si:dkey-65b12.6 ENSDARG00000076830 1320.82 9901.00 si:dkey-65b12.6 [Source:ZFIN;Acc:ZDB-GENE-060526-329]
75. sirt2 ENSDARG00000011488 1320.82 9901.00 sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
76. smarca5 ENSDARG00000052348 1320.82 9901.00 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
77. snrpd3 ENSDARG00000013800, ENSDARG00000112203 1320.82 9901.00 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
78. srsf3a ENSDARG00000025397, ENSDARG00000100815 1320.82 9901.00 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
79. tbl1xr1a ENSDARG00000058696 1320.82 9901.00 transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
80. tomm70a ENSDARG00000029639, ENSDARG00000112054 1320.82 9901.00 translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
81. tox3 ENSDARG00000073957 1320.82 9901.00 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
82. tpd52l2b ENSDARG00000013655 1320.82 9901.00 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
83. tpx2 ENSDARG00000078654 1320.82 9901.00 TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
84. uckl1b ENSDARG00000078973 1320.82 9901.00 uridine-cytidine kinase 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-090311-45]
85. yipf3 ENSDARG00000020449 1320.82 9901.00 Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
86. ywhah ENSDARG00000005560 1320.82 9901.00 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
87. zgc:161979 zgc:161979 1320.82 9901.00
88. zgc:63587 ENSDARG00000017140 1320.82 9901.00 zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
89. zgc:66286 zgc:66286 1320.82 9901.00
90. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 1320.82 9901.00 zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
91. 5S_rRNA 5S_rRNA 0.00 0.00
92. 5S_rRNA_1 5S_rRNA_1 0.00 0.00
93. 5S_rRNA_10 5S_rRNA_10 0.00 0.00
94. 5S_rRNA_11 5S_rRNA_11 0.00 0.00
95. 5S_rRNA_12 5S_rRNA_12 0.00 0.00
96. 5S_rRNA_13 5S_rRNA_13 0.00 0.00
97. 5S_rRNA_14 5S_rRNA_14 0.00 0.00
98. 5S_rRNA_15 5S_rRNA_15 0.00 0.00
99. 5S_rRNA_16 5S_rRNA_16 0.00 0.00
100. 5S_rRNA_17 5S_rRNA_17 0.00 0.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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