Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_28hpf_trunk1, section s20.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 24278.87 182004.39
2. krt4 ENSDARG00000017624, ENSDARG00000115790 5033.64 37734.23 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 2659.20 19934.46 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. zgc:161979 zgc:161979 2619.77 19638.87
5. zgc:161979_1 zgc:161979_1 2470.82 18522.28
6. apoeb ENSDARG00000040295 2291.20 17175.78 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
7. apobb apobb 2225.49 16683.19
8. apoc1l apoc1l 2164.16 16223.43
9. tmsb4x ENSDARG00000077777 1826.83 13694.67 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. apoa2 ENSDARG00000015866 1686.64 12643.75 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
11. actb2 ENSDARG00000037870 1296.74 9720.90 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1283.60 9622.39 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. fabp2 ENSDARG00000006427, ENSDARG00000110230 1051.41 7881.80 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
14. actb1 ENSDARG00000037746, ENSDARG00000113649 985.70 7389.21 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
15. mt-nd2 ENSDARG00000063899 928.75 6962.29 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
16. mt-co2 ENSDARG00000063908 784.18 5878.54 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
17. fetub ENSDARG00000053973 779.80 5845.70 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
18. eef1a1l1 ENSDARG00000020850 775.42 5812.87 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. zgc:153129 zgc:153129 705.32 5287.37
20. bhmt ENSDARG00000013430 661.51 4958.95 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
21. ctsla ENSDARG00000007836 657.13 4926.12 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
22. mt-co3 ENSDARG00000063912 591.42 4433.53 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
23. mt-nd4 ENSDARG00000063917 508.18 3809.53 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
24. mt2 ENSDARG00000041623, ENSDARG00000113583 455.61 3415.44 metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
25. mt-atp6 ENSDARG00000063911 411.80 3087.02 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
26. AC024175.17 AC024175.17 407.42 3054.19
27. sepp1a 403.04 3021.35 selenoprotein P, plasma, 1a
28. cfl1l ENSDARG00000012972 359.23 2692.94 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
29. eef2b ENSDARG00000100371, ENSDARG00000109247 359.23 2692.94 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
30. si:dkey-150i13.2 ENSDARG00000071052 359.23 2692.94 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
31. tfa ENSDARG00000016771 359.23 2692.94 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
32. rbp4 ENSDARG00000101199 346.09 2594.43 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
33. gatm ENSDARG00000036239 341.71 2561.60 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
34. si:dkey-151g10.6 si:dkey-151g10.6 341.71 2561.60
35. apoa4 apoa4 337.33 2528.76
36. APOB APOB 328.57 2463.10
37. mt-nd1 ENSDARG00000063895 324.19 2430.26 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
38. ppiaa ENSDARG00000009212 315.42 2364.52 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
39. gamt ENSDARG00000070844, ENSDARG00000109945 311.04 2331.68 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
40. mt-cyb ENSDARG00000063924 306.66 2298.85 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
41. dbi ENSDARG00000026369 293.52 2200.35 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
42. zgc:92533 zgc:92533 289.14 2167.51
43. hmga1a ENSDARG00000028335 284.76 2134.68 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
44. zgc:112425 zgc:112425 284.76 2134.68
45. pvalb9 ENSDARG00000071601, ENSDARG00000113946 262.85 1970.43 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
46. slc43a2b ENSDARG00000061120, ENSDARG00000117188 262.85 1970.43 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
47. hspa8 ENSDARG00000068992, ENSDARG00000114726 249.71 1871.93 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
48. rpl18a ENSDARG00000025073 240.95 1806.26 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
49. aldob ENSDARG00000053684 232.19 1740.59 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
50. rpl10a ENSDARG00000042905, ENSDARG00000115649 232.19 1740.59 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
51. btf3 ENSDARG00000035400, ENSDARG00000116462 227.81 1707.76 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
52. rpl26 ENSDARG00000102317 219.04 1642.01 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
53. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 214.66 1609.18 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
54. cyt1l ENSDARG00000036832 210.28 1576.35 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
55. krt8 ENSDARG00000058358, ENSDARG00000109279 210.28 1576.35 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
56. myl6 ENSDARG00000008494, ENSDARG00000115496 210.28 1576.35 myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
57. pabpc1a ENSDARG00000017219 205.90 1543.51 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
58. ctsba ENSDARG00000055120 197.14 1477.84 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
59. prps1a ENSDARG00000015524 197.14 1477.84 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
60. rps27a ENSDARG00000032725, ENSDARG00000114059 197.14 1477.84 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
61. rpl27 ENSDARG00000015128 192.76 1445.01 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
62. rpl36a ENSDARG00000058105, ENSDARG00000112656 188.38 1412.17 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
63. apoc2 ENSDARG00000092155 184.00 1379.34 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
64. mt-co1 ENSDARG00000063905 184.00 1379.34 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
65. rpl8 ENSDARG00000014867 184.00 1379.34 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
66. ldhba ENSDARG00000019644 179.62 1346.51 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
67. prdx5 ENSDARG00000055064 179.62 1346.51 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
68. APOA4 APOA4 175.24 1313.67
69. hsp90ab1 ENSDARG00000029150 175.24 1313.67 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
70. rps14 ENSDARG00000036629 170.85 1280.76 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
71. rps2 ENSDARG00000077291 170.85 1280.76 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. myh9a ENSDARG00000063295 166.47 1247.93 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
73. npc2 ENSDARG00000090912 166.47 1247.93 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
74. rpl21 ENSDARG00000010516, ENSDARG00000110263 166.47 1247.93 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
75. zgc:152830 ENSDARG00000079932 166.47 1247.93 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
76. psap ENSDARG00000013968 162.09 1215.09 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
77. rpl19 ENSDARG00000013307 162.09 1215.09 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
78. zgc:165571 zgc:165571 162.09 1215.09
79. nt5c3a ENSDARG00000058597 157.71 1182.26 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
80. cst3 ENSDARG00000007795 153.33 1149.42 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
81. glula ENSDARG00000099776 153.33 1149.42 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
82. icn ENSDARG00000009978 153.33 1149.42 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
83. ctsll ENSDARG00000011701, ENSDARG00000112885 148.95 1116.59 cathepsin L, like [Source:ZFIN;Acc:ZDB-GENE-041010-76]
84. si:dkeyp-86f7.3 si:dkeyp-86f7.3 148.95 1116.59
85. RPL29 ENSDARG00000077717 144.57 1083.76 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
86. apoea ENSDARG00000102004 144.57 1083.76 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
87. rpl36 ENSDARG00000100588 144.57 1083.76 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
88. rpl7 ENSDARG00000007320 144.57 1083.76 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
89. rps5 ENSDARG00000043453 144.57 1083.76 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
90. si:ch1073-429i10.3 144.57 1083.76 si:ch1073-429i10.3, transcript variant X2
91. ssr2 ENSDARG00000005230 144.57 1083.76 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
92. zgc:136410 ENSDARG00000102241 144.57 1083.76 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
93. AL954137.2 ENSDARG00000114408 140.19 1050.92
94. ahcy ENSDARG00000005191 140.19 1050.92 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
95. mthfd1l ENSDARG00000042221, ENSDARG00000110473 140.19 1050.92 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
96. paics ENSDARG00000033539 135.81 1018.09 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
97. rps23 ENSDARG00000021838 135.81 1018.09 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
98. faua ENSDARG00000099022 131.43 985.25 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
99. hdlbp hdlbp 131.43 985.25
100. rpia ENSDARG00000056640, ENSDARG00000110576 131.43 985.25 ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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