Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice1, section s39.

Sample reads: 391,647. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. PTMA ENSG00000187514 9085.37 23197.85 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
2. EEF1A1 ENSG00000156508 4096.62 10459.98 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPL41 ENSG00000229117 3641.92 9298.98 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
4. RPL5 ENSG00000122406 2515.24 6422.21 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
5. PPIA ENSG00000196262 2404.44 6139.30 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
6. ACTB ENSG00000075624 2377.10 6069.50 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
7. ACTG1 ENSG00000184009 2285.01 5834.36 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
8. TUBA1B ENSG00000123416 2010.18 5132.63 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
9. RPL15 ENSG00000174748 1959.82 5004.05 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
10. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1889.31 4824.01 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
11. RPS20 ENSG00000008988 1828.87 4669.69 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
12. MDK ENSG00000110492 1637.50 4181.06 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
13. GAPDH ENSG00000111640 1566.99 4001.03 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
14. GNAS ENSG00000087460 1554.04 3967.96 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
15. RPS6 ENSG00000137154 1520.94 3883.45 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
16. RPL18A ENSG00000105640 1449.00 3699.76 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
17. RPS12 ENSG00000112306 1390.00 3549.11 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
18. RPL9 ENSG00000163682 1379.93 3523.40 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
19. HSP90AB1 ENSG00000096384 1302.23 3325.01 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
20. MTRNR2L8 ENSG00000255823 1277.77 3262.55 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
21. RPL37 ENSG00000145592 1276.33 3258.88 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
22. STMN1 ENSG00000117632 1254.74 3203.75 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
23. RPL13AP20 ENSG00000234498 1243.23 3174.36 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
24. VIM ENSG00000026025 1223.09 3122.94 vimentin [Source:HGNC Symbol;Acc:HGNC:12692]
25. RPS5 ENSG00000083845 1217.33 3108.23 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
26. RPL23 ENSG00000125691 1185.67 3027.39 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
27. RPL34 ENSG00000109475 1171.29 2990.68 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
28. RPS15A ENSG00000134419 1168.41 2983.32 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
29. RPL31 ENSG00000071082 1161.21 2964.94 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
30. RPS23 ENSG00000186468 1145.38 2924.52 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
31. RPS27A ENSG00000143947 1143.95 2920.87 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
32. RPL13 ENSG00000167526 1116.61 2851.06 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
33. RPS2 ENSG00000140988 1115.17 2847.38 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
34. RPL10A ENSG00000198755 1080.63 2759.19 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
35. RPS11 ENSG00000142534 1069.12 2729.80 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
36. NGFRAP1 NGFRAP1 1028.83 2626.93
37. MTRNR2L1 ENSG00000256618 988.54 2524.06 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
38. RPS8 ENSG00000142937 978.47 2498.35 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
39. TPT1 ENSG00000133112 974.15 2487.32 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
40. RPLP1 ENSG00000137818 943.93 2410.15 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
41. IFITM2 ENSG00000185201 930.98 2377.09 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
42. NPM1 ENSG00000181163 926.67 2366.08 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
43. RPL14 ENSG00000188846 925.23 2362.41 ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:10305]
44. RPL7A ENSG00000148303, ENSG00000280858 899.33 2296.28 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
45. CFL1 ENSG00000172757 895.01 2285.25 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
46. RPS27 ENSG00000177954 853.28 2178.70 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
47. NNAT ENSG00000053438 825.94 2108.89 neuronatin [Source:HGNC Symbol;Acc:HGNC:7860]
48. RPL11 ENSG00000142676 805.80 2057.46 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
49. RPL10 ENSG00000147403 794.29 2028.08 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
50. RPL35 ENSG00000136942 774.14 1976.63 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
51. RPL3 ENSG00000100316 765.51 1954.59 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
52. RPL6 ENSG00000089009 754.00 1925.20 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
53. RPS25 ENSG00000118181, ENSG00000280831 735.29 1877.43 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
54. RPS16 ENSG00000105193 722.34 1844.36 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
55. RPS15 ENSG00000115268 712.27 1818.65 ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:10388]
56. UBB ENSG00000170315 709.39 1811.30 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
57. RPS13 ENSG00000110700 702.20 1792.94 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
58. RPS14 ENSG00000164587 690.68 1763.53 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
59. HNRNPC ENSG00000092199 689.25 1759.88 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
60. RPLP0 ENSG00000089157 689.25 1759.88 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
61. PFN1 ENSG00000108518 687.81 1756.20 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
62. RPL29 ENSG00000162244 680.61 1737.81 ribosomal protein L29 [Source:HGNC Symbol;Acc:HGNC:10331]
63. HNRNPD ENSG00000138668 676.29 1726.78 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
64. H2AFZ ENSG00000164032 674.86 1723.13 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
65. EIF4G2 ENSG00000110321 666.22 1701.07 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
66. HSPA8 ENSG00000109971 666.22 1701.07 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
67. RBM3 ENSG00000102317 654.71 1671.68 RNA binding motif protein 3 [Source:HGNC Symbol;Acc:HGNC:9900]
68. RPS3A ENSG00000145425 651.83 1664.33 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
69. RPS21 ENSG00000171858 641.76 1638.62 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
70. RPL37A ENSG00000197756 621.62 1587.19 ribosomal protein L37a [Source:HGNC Symbol;Acc:HGNC:10348]
71. RPS28 ENSG00000233927 621.62 1587.19 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
72. SOX4 ENSG00000124766 620.18 1583.52 SRY-box 4 [Source:HGNC Symbol;Acc:HGNC:11200]
73. DDX17 ENSG00000100201 608.67 1554.13 DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
74. RPS7 ENSG00000171863 607.23 1550.45 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
75. HMGN1 ENSG00000205581 602.91 1539.42 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
76. RPL18 ENSG00000063177 601.47 1535.74 ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:10310]
77. ENO1 ENSG00000074800 594.28 1517.39 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
78. HNRNPH1 ENSG00000169045, ENSG00000284254 591.40 1510.03 heterogeneous nuclear ribonucleoprotein H1 [Source:HGNC Symbol;Acc:HGNC:5041]
79. MARCKS ENSG00000277443 587.08 1499.00 myristoylated alanine rich protein kinase C substrate [Source:HGNC Symbol;Acc:HGNC:6759]
80. SERF2 ENSG00000140264 575.57 1469.61 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
81. PBX1 ENSG00000185630 571.25 1458.58 PBX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8632]
82. SRSF3 ENSG00000112081 571.25 1458.58 serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]
83. RPL4 ENSG00000174444 569.81 1454.91 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
84. ACTC1 ENSG00000159251 568.38 1451.26 actin, alpha, cardiac muscle 1 [Source:HGNC Symbol;Acc:HGNC:143]
85. HMGA2 ENSG00000149948 559.74 1429.19 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
86. HNRNPA1 ENSG00000135486 558.30 1425.52 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
87. RPL26 ENSG00000161970 555.43 1418.19 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
88. RPL32 ENSG00000144713 553.99 1414.51 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
89. SRSF2 ENSG00000161547 548.23 1399.81 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
90. RPL39 ENSG00000198918 523.77 1337.35 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
91. IFITM3 ENSG00000142089 522.33 1333.68 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
92. YWHAE ENSG00000108953, ENSG00000274474 522.33 1333.68 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:HGNC Symbol;Acc:HGNC:12851]
93. ATP5G2 516.57 1318.97 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
94. SRP14 ENSG00000140319 515.14 1315.32 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
95. TPM4 ENSG00000167460 509.38 1300.61 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
96. PFN2 ENSG00000070087 502.18 1282.23 profilin 2 [Source:HGNC Symbol;Acc:HGNC:8882]
97. YBX1 ENSG00000065978 492.11 1256.51 Y-box binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8014]
98. MARCKSL1 ENSG00000175130 490.67 1252.84 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
99. RPS14P3 486.36 1241.83 ribosomal protein S14 pseudogene 3
100. COL3A1 ENSG00000168542 477.72 1219.77 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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