Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for zhx3

Gene Name Gene ID Reads Annotation
zhx3 ENSDARG00000019774 463 zinc fingers and homeoboxes 3 [Source:ZFIN;Acc:ZDB-GENE-031107-1]










Genes with expression patterns similar to zhx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zhx3 ENSDARG00000019774 463 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc fingers and homeoboxes 3 [Source:ZFIN;Acc:ZDB-GENE-031107-1]
2. CU928083.1 ENSDARG00000097907 1279 1.614 - 0.829 - - - 0.785 - - -
3. dctn4 ENSDARG00000023988 860 1.605 - - - - 0.831 0.774 - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
4. hoxa9a ENSDARG00000105013 1509 1.596 - 0.773 - - - 0.823 - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
5. myt1b ENSDARG00000102879 5411 1.565 - 0.736 - - - 0.829 - - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
6. gipc1 ENSDARG00000104483 2913 1.555 - 0.705 - - - 0.850 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
7. lgals1l1 ENSDARG00000088711 4515 1.553 - 0.725 - 0.828 - - - - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
8. KBTBD2 ENSDARG00000087226 707 1.546 - 0.760 - - - - - 0.786 - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
9. hoxb7a ENSDARG00000056030 1212 1.545 - 0.746 - - - 0.799 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
10. ATP6AP1L_1 ATP6AP1L_1 508 1.542 - 0.805 - - - - - 0.737 -
11. gne ENSDARG00000099771 617 1.536 - 0.804 - - - 0.732 - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
12. rad21b ENSDARG00000035655 87 1.534 - - - - - 0.762 - 0.772 - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
13. add2 ENSDARG00000074581 1402 1.531 - 0.786 - - - 0.745 - - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
14. dis3l2 ENSDARG00000033259 1509 1.528 - 0.777 - - - - - 0.751 - DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
15. ube3a ENSDARG00000055737 1874 1.527 - 0.798 - - - 0.729 - - - ubiquitin protein ligase E3A [Source:ZFIN;Acc:ZDB-GENE-041114-190]
16. rwdd ENSDARG00000068256 964 1.522 - 0.730 - - - - - 0.792 - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
17. zc3h7a ENSDARG00000102195 564 1.522 - 0.751 - - - - - 0.771 - zinc finger CCCH-type containing 7A [Source:ZFIN;Acc:ZDB-GENE-040426-2776]
18. rdh12 ENSDARG00000018069 396 1.518 - - - 0.753 - 0.765 - - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
19. pcsk1 ENSDARG00000002600 404 1.506 - - - - - 0.777 - 0.729 - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
20. wu:fb30e12 wu:fb30e12 1254 1.504 - 0.705 - - - 0.799 - - -
21. irx5b ENSDARG00000074070 459 1.502 - - - 0.711 - 0.791 - - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
22. rab14_1 ENSDARG00000074246 481 1.501 - 0.729 - - - 0.772 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
23. ccdc85b ENSDARG00000061543 1309 1.5 - - - - - 0.741 - 0.759 - coiled-coil domain containing 85B [Source:ZFIN;Acc:ZDB-GENE-060130-56]
24. PMFBP1 ENSDARG00000101917 292 1.498 - - - - - 0.794 - 0.704 - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
25. tmem57b 871 1.496 - 0.747 - - - 0.749 - - - transmembrane protein 57b, transcript variant X2
26. irx3b ENSDARG00000031138 2538 1.496 - 0.730 - - - 0.766 - - - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
27. srpk1b ENSDARG00000031560 2079 1.49 - 0.702 - - - 0.788 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
28. sncgb ENSDARG00000109715 1014 1.478 - - - - - 0.778 - 0.700 - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
29. tnrc5 412 1.467 - 0.726 - - - - - 0.741 - trinucleotide repeat containing 5
30. pax3a ENSDARG00000010192 626 1.462 - - - - - 0.760 - 0.702 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
31. ksr2 ENSDARG00000094526 134 1.45 - - - - - 0.718 - 0.732 - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
32. her4.1 ENSDARG00000056732 1264 1.443 - 0.708 - - - 0.735 - - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
33. hiat1b ENSDARG00000043055 757 1.441 - - - 0.728 - 0.713 - - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
34. klhl8 ENSDARG00000101270 1305 1.438 - 0.707 - - - 0.731 - - - kelch-like family member 8 [Source:ZFIN;Acc:ZDB-GENE-070209-226]
35. epha4b ENSDARG00000011600 3110 1.406 - 0.705 - - - 0.701 - - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
36. pcif1 ENSDARG00000099084 2851 0.92 - - - - - 0.920 - - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
37. CABZ01072954.1 CABZ01072954.1 2330 0.912 - - - - - 0.912 - - -
38. cd99l2 ENSDARG00000056722 5036 0.908 - - - - - 0.908 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
39. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 0.901 - - - - - 0.901 - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
40. CU459160.2 CU459160.2 282 0.896 - - - - - 0.896 - - -
41. tmsb ENSDARG00000054911 6411 0.893 - - - - - 0.893 - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
42. GTF3C1 GTF3C1 836 0.889 - - - 0.889 - - - - -
43. ubtf ENSDARG00000035066 4070 0.888 - - - - - 0.888 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
44. PACS1_1 PACS1_1 1264 0.887 - - - - - 0.887 - - -
45. sh3bp5lb 1090 0.886 - - - - - 0.886 - - - SH3-binding domain protein 5-like, b
46. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 0.886 - - - - - 0.886 - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
47. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 0.882 - - - - - 0.882 - - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
48. igsf9a ENSDARG00000075864 1870 0.88 - - - - - 0.880 - - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
49. dexi ENSDARG00000055474 468 0.878 - - - - - 0.878 - - - Dexi homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040808-20]
50. rabif ENSDARG00000002690, ENSDARG00000114340 891 0.877 - - - - - 0.877 - - - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
51. itm2cb ENSDARG00000039650 716 0.877 - - - - - 0.877 - - - integral membrane protein 2Cb [Source:ZFIN;Acc:ZDB-GENE-030131-7806]
52. khsrp ENSDARG00000026489 15738 0.875 - - - - - 0.875 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
53. mn1b ENSDARG00000079248 882 0.874 - - - - - 0.874 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
54. sumo3a ENSDARG00000028119 13447 0.873 - - - - - 0.873 - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
55. pdlim5a ENSDARG00000101777 357 0.873 - - - - - 0.873 - - - PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
56. appb ENSDARG00000055543, ENSDARG00000109552 4461 0.873 - - - - - 0.873 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
57. xpr1 xpr1 840 0.872 - - - - - 0.872 - - -
58. tspan11 ENSDARG00000001781 743 0.872 - - - - - 0.872 - - - tetraspanin 11 [Source:ZFIN;Acc:ZDB-GENE-041210-93]
59. slc7a6os ENSDARG00000010596 1599 0.868 - - - - - 0.868 - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
60. nr2f1a ENSDARG00000052695 5037 0.868 - - - - - 0.868 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
61. si:ch211-288g17.3 ENSDARG00000070959 2425 0.866 - - - - - 0.866 - - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
62. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 0.866 - - - - - 0.866 - - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
63. npm1b ENSDARG00000037675 5448 0.866 - - - - - 0.866 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
64. pcdh1a ENSDARG00000062720 276 0.866 - - - - - 0.866 - - - protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]
65. kif3b ENSDARG00000101120 1158 0.864 - - - - - 0.864 - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
66. lphn3.1 lphn3.1 756 0.864 - - - - - 0.864 - - -
67. hmgb3a ENSDARG00000056725 15668 0.862 - - - - - 0.862 - - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
68. crfb6 1137 0.861 - - - - - 0.861 - - - cytokine receptor family member b6
69. ppp1r14c ENSDARG00000077341 1587 0.861 - - - - - 0.861 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
70. anapc13 ENSDARG00000078435 996 0.86 - - - - - 0.860 - - - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
71. smad3b ENSDARG00000010207 951 0.86 - - - - - 0.860 - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
72. arid1aa ENSDARG00000101710 3644 0.86 - - - - - 0.860 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
73. si:dkey-25e11.10 si:dkey-25e11.10 955 0.859 - - - - - 0.859 - - -
74. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 0.859 - - - - - 0.859 - - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
75. MEGF9_1 MEGF9_1 537 0.859 - - - - - 0.859 - - -
76. notch1b ENSDARG00000052094 7874 0.857 - - - - - 0.857 - - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
77. ROBO3_1 ROBO3_1 468 0.856 - - - - - 0.856 - - -
78. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 0.856 - - - - - 0.856 - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
79. si:ch211-89f7.1 si:ch211-89f7.1 699 0.855 - - - 0.855 - - - - -
80. plp1a ENSDARG00000103732 3544 0.855 - - - - - 0.855 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
81. seta ENSDARG00000031495 39977 0.855 - - - - - 0.855 - - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
82. znf346 ENSDARG00000060695 3942 0.854 - - - 0.854 - - - - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
83. vezf1a ENSDARG00000008247 1449 0.854 - - - - - 0.854 - - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
84. hnrnpab hnrnpab 72354 0.853 - - - - - 0.853 - - -
85. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 0.853 - - - - - 0.853 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
86. fgfr1op2 ENSDARG00000009657 904 0.852 - - - - - 0.852 - - - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
87. atp1b4 ENSDARG00000053262 1337 0.852 - - - - - 0.852 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
88. wnt4a ENSDARG00000071208 1157 0.851 - 0.851 - - - - - - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
89. srsf6b ENSDARG00000016783 9926 0.851 - - - - - 0.851 - - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
90. ncana 1537 0.851 - - - - - 0.851 - - - neurocan a
91. dixdc1a ENSDARG00000025302 716 0.85 - - - - - 0.850 - - - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
92. GANAB_2 GANAB_2 3210 0.85 - - - - - 0.850 - - -
93. gpatch2 1221 0.85 - - - - - 0.850 - - - G patch domain containing 2, transcript variant X1
94. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 0.85 - - - - - 0.850 - - - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
95. flrt1b ENSDARG00000075597 465 0.848 - - - - - 0.848 - - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
96. drg1 ENSDARG00000039345 7545 0.848 - - - - - 0.848 - - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
97. zbtb18 ENSDARG00000028228 3653 0.846 - - - - - 0.846 - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
98. NAT16 ENSDARG00000086222 4682 0.846 - - - - - 0.846 - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
99. kif5aa ENSDARG00000098936 2428 0.845 - - - - - 0.845 - - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
100. atp6v0a2a ENSDARG00000035538 278 0.845 - - - - - 0.845 - - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]

There are 1229 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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