Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:172079

Gene Name Gene ID Reads Annotation
zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]










Genes with expression patterns similar to zgc:172079

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
2. ccdc129 37 1.923 - 1.000 - - - - 0.923 - - coiled-coil domain containing 129, transcript variant X2
3. CABZ01081752.1 ENSDARG00000099245 84 1.87 - 1.000 - - - - 0.870 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
4. CU693494.3 CU693494.3 169 1.858 0.965 - - - - 0.893 - - -
5. DNER ENSDARG00000061031 123 1.839 0.839 1.000 - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
6. rasl12 ENSDARG00000002701 66 1.823 - 1.000 - - - - 0.823 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
7. elfn1b ENSDARG00000074372 25 1.798 0.798 1.000 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
8. taok3b ENSDARG00000094052 36 1.751 0.751 1.000 - - - - - - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
9. phf19 ENSDARG00000078050 117 1.744 - 0.923 - - 0.821 - - - - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
10. cadpsa ENSDARG00000043661 160 1.742 - 0.881 - - - - 0.861 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
11. gas8 ENSDARG00000101431 140 1.734 - 0.857 - - - - 0.877 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
12. TNS3_1 TNS3_1 8 1.719 - 1.000 - - - 0.719 - - -
13. ccdc85a ENSDARG00000039497 24 1.673 - 0.906 - - 0.767 - - - - coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]
14. ntpcr ENSDARG00000021853 104 1.662 - - - - - 0.731 0.931 - - nucleoside-triphosphatase, cancer-related [Source:ZFIN;Acc:ZDB-GENE-040801-200]
15. wu:fi34b01 38 1.617 - 0.729 - - - - 0.888 - - wu:fi34b01
16. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 1.617 - - - - 0.746 - 0.871 - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
17. rbp1b rbp1b 36 1.533 0.735 - - - 0.798 - - - -
18. atxn10 ENSDARG00000008439 156 1.523 0.757 - - - - - 0.766 - - ataxin 10 [Source:ZFIN;Acc:ZDB-GENE-060503-180]
19. cabp1a ENSDARG00000019990 110 1.504 - - - - 0.702 - 0.802 - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
20. gabra1 ENSDARG00000068989 581 1.502 0.747 - - - - - 0.755 - - gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-061013-194]
21. si:ch211-238e22.4 ENSDARG00000094500 78 1.498 0.735 - - - 0.763 - - - - si:ch211-238e22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3632]
22. dscama ENSDARG00000024865 75 1.464 - 0.712 - - - - 0.752 - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
23. CU693480.1 CU693480.1 51 1.434 - 0.721 - - 0.713 - - - -
24. cacna1c ENSDARG00000008398 193 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
25. rcv1 rcv1 77 1 - 1.000 - - - - - - -
26. ctskl ctskl 17 1 - 1.000 - - - - - - -
27. scara3 ENSDARG00000008060 169 1 - 1.000 - - - - - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
28. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
29. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
30. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
31. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
32. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
33. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - 1.000 - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
34. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
35. rnf217 ENSDARG00000060944 10 1 - 1.000 - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
36. CU694952.2 CU694952.2 3 1 - 1.000 - - - - - - -
37. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
38. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - 1.000 - - - - - - -
39. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
40. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
41. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
42. CR848836.6 CR848836.6 93 1 - 1.000 - - - - - - -
43. GRIN3A ENSDARG00000075802 27 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
44. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
45. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b
46. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
47. si:ch211-268b13.3 si:ch211-268b13.3 28 1 - 1.000 - - - - - - -
48. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
49. C21H11orf82 C21H11orf82 50 1 - 1.000 - - - - - - -
50. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
51. wu:fb37b09 wu:fb37b09 10685 1 - 1.000 - - - - - - -
52. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1 - 1.000 - - - - - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
53. ankrd33aa ENSDARG00000055638 6 1 - 1.000 - - - - - - - ankyrin repeat domain 33Aa [Source:ZFIN;Acc:ZDB-GENE-080520-2]
54. CR628323.3 ENSDARG00000106158 1 1 - 1.000 - - - - - - - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
55. mamdc2a ENSDARG00000098345 21 1 - 1.000 - - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
56. GABRR1 ENSDARG00000043902 71 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
57. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
58. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
59. CABZ01087025.1 ENSDARG00000117232 10 1 - 1.000 - - - - - - -
60. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
61. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
62. gc2 ENSDARG00000018329 0 1 - 1.000 - - - - - - - guanylyl cyclase 2 [Source:ZFIN;Acc:ZDB-GENE-011128-8]
63. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - 1.000 - - - - - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
64. BX511034.1 ENSDARG00000071629 7 1 - 1.000 - - - - - - -
65. trim35-3_1 ENSDARG00000052255 6 1 - 1.000 - - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
66. gata2b ENSDARG00000009094 16 1 - 1.000 - - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
67. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
68. loxhd1a ENSDARG00000094738 7 1 - 1.000 - - - - - - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
69. heyl ENSDARG00000055798, ENSDARG00000112770 76 1 - 1.000 - - - - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
70. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
71. C25H12orf29 C25H12orf29 31 1 - 1.000 - - - - - - -
72. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
73. pcdh8 ENSDARG00000006467 317 1 - 1.000 - - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
74. U11 U11 11 1 - 1.000 - - - - - - -
75. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
76. CU207301.2 ENSDARG00000097677 2 1 - 1.000 - - - - - - -
77. CR933820.2 CR933820.2 152 1 - 1.000 - - - - - - -
78. im:7151068 im:7151068 2 1 - 1.000 - - - - - - -
79. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
80. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
81. VMAC ENSDARG00000110997 2 1 - 1.000 - - - - - - - vimentin type intermediate filament associated coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:33803]
82. ankar ENSDARG00000000516 3 1 - 1.000 - - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
83. CT027674.1 ENSDARG00000106606 11 1 - 1.000 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
84. ano8a ENSDARG00000076265 20 1 - 1.000 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
85. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
86. si:ch1073-170o4.1 ENSDARG00000092780 18 1 - 1.000 - - - - - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
87. PNPLA2 ENSDARG00000089390 0 1 - 1.000 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
88. TTBK1 TTBK1 120 1 - 1.000 - - - - - - -
89. ptger4a ENSDARG00000059236 13 1 - 1.000 - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
90. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1 - 1.000 - - - - - - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
91. slc1a3b ENSDARG00000043148 431 1 - 1.000 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
92. si:ch211-162i8.2 ENSDARG00000096041 4 1 - 1.000 - - - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
93. gabpb1 ENSDARG00000023659 26 1 - 1.000 - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
94. FP085391.2 FP085391.2 85 1 - 1.000 - - - - - - -
95. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
96. sftpba ENSDARG00000094708 2 1 - 1.000 - - - - - - - surfactant protein Ba [Source:ZFIN;Acc:ZDB-GENE-091204-378]
97. dhcr24 ENSDARG00000013236 61 1 - 1.000 - - - - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
98. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
99. lrrn3 lrrn3 137 1 - 1.000 - - - - - - -
100. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]

There are 927 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA