Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:171971

Gene Name Gene ID Reads Annotation
zgc:171971 ENSDARG00000042054 388 zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]










Genes with expression patterns similar to zgc:171971

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:171971 ENSDARG00000042054 388 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
2. ENSDARG00000089986 ENSDARG00000089986 308 2.481 0.721 0.868 - - - - 0.892 - -
3. zgc:113443 359 2.455 0.780 - 0.724 - - - - 0.951 - zgc:113443, transcript variant X3
4. samd10a ENSDARG00000079978, ENSDARG00000112138 430 1.835 - - - - - - 0.896 0.939 - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
5. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 1.81 - - - - - - 0.881 0.929 - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
6. nudt17 ENSDARG00000008014 479 1.769 - - - - - - 0.786 0.983 - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
7. GGT7 ENSDARG00000115805 481 1.766 - - - - - - 0.813 0.953 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
8. coro2a ENSDARG00000005210 1479 1.751 - - - - - - 0.876 0.875 - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
9. agk ENSDARG00000009837, ENSDARG00000113514 811 1.741 - 0.784 - - - - - 0.957 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
10. clic1 ENSDARG00000103340 2235 1.717 - - - - - - 0.772 0.945 - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
11. si:dkey-238o14.5 si:dkey-238o14.5 450 1.696 - 0.737 - - - - - 0.959 -
12. CU681846.1 CU681846.1 86 1.692 - - - - - 0.894 0.798 - -
13. rdh12 ENSDARG00000018069 396 1.681 0.721 - - - - - - 0.960 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
14. si:dkey-11f4.14 ENSDARG00000098461 35 1.673 - - - - - 0.755 0.918 - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
15. rad54b ENSDARG00000092134 231 1.669 0.839 0.830 - - - - - - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
16. paf1 ENSDARG00000098432 1806 1.669 0.736 - - - - - 0.933 - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
17. pes ENSDARG00000018902 3286 1.653 - 0.714 - - - - - 0.939 - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
18. igfbp1a ENSDARG00000099351 1717 1.649 - 0.742 - - - - - 0.907 - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
19. BX649554.3_1 BX649554.3_1 1071 1.631 - - - - - 0.722 - 0.909 -
20. cbx2 ENSDARG00000044938 1576 1.619 0.827 - - - - 0.792 - - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
21. popdc3 ENSDARG00000058551 538 1.618 - 0.878 - - - - 0.740 - - popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
22. ppp1cc 2361 1.618 - - - - - - 0.763 0.855 - protein phosphatase 1, catalytic subunit, gamma isozyme
23. JMJD1C JMJD1C 289 1.591 0.827 - - - - 0.764 - - -
24. si:dkey-43f9.4 si:dkey-43f9.4 180 1.576 - - - - - 0.829 0.747 - -
25. rnmt ENSDARG00000070553 1743 1.565 - 0.796 - - - - 0.769 - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
26. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.564 - 0.770 - - - - 0.794 - -
27. txnl4b ENSDARG00000058962 296 1.56 0.744 0.816 - - - - - - - thioredoxin-like 4B [Source:ZFIN;Acc:ZDB-GENE-051030-63]
28. CDA 491 1.557 - 0.825 - - - - 0.732 - - cytidine deaminase
29. fpgt ENSDARG00000042139 155 1.557 - - - - - 0.769 0.788 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
30. CCDC23 CCDC23 54 1.553 - 0.802 - - - 0.751 - - -
31. otx2 766 1.547 - - - - - 0.755 0.792 - - orthodenticle homeobox 2, transcript variant X2
32. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 1.543 - 0.812 - - - - 0.731 - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
33. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.542 - - - - - 0.759 - 0.783 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
34. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.539 - - - - - 0.811 0.728 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
35. hcn4l ENSDARG00000074419 46 1.538 0.766 0.772 - - - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
36. trpm4 trpm4 501 1.538 - - - - - 0.708 0.830 - -
37. GANAB_2 GANAB_2 3210 1.523 0.764 - - - - - 0.759 - -
38. cdadc1 ENSDARG00000036650 16 1.523 - 0.723 - - - - 0.800 - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
39. CR790368.1 ENSDARG00000100936 20 1.521 - 0.723 - - - - 0.798 - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
40. NPTXR NPTXR 241 1.518 0.777 0.741 - - - - - - -
41. BX927351.1 ENSDARG00000096844 125 1.515 - - - - - 0.797 0.718 - -
42. si:ch211-174j14.2 ENSDARG00000093015 111 1.514 - 0.730 - - - - 0.784 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
43. atrip ENSDARG00000063076 385 1.506 - 0.751 - - - - 0.755 - - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
44. stk11ip ENSDARG00000070122, ENSDARG00000111986 199 1.5 - 0.787 - - - - 0.713 - - serine/threonine kinase 11 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1022]
45. ENSDARG00000091446 ENSDARG00000091446 239 1.5 - 0.706 - - - - 0.794 - -
46. ltc4s ENSDARG00000062598 138 1.497 - 0.772 - - - 0.725 - - - leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
47. si:dkey-220o10.1 si:dkey-220o10.1 63 1.492 - 0.735 - - - 0.757 - - -
48. rfk ENSDARG00000060522 546 1.488 0.737 0.751 - - - - - - - riboflavin kinase [Source:ZFIN;Acc:ZDB-GENE-081104-321]
49. CU638740.3 CU638740.3 164 1.486 - - - - - 0.742 0.744 - -
50. CENPT CENPT 330 1.482 - - - - - 0.723 0.759 - -
51. dennd5a ENSDARG00000017006 3426 1.481 - - - - - 0.718 0.763 - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
52. si:dkey-4c15.12 ENSDARG00000095350 119 1.48 - 0.771 - - - 0.709 - - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
53. pigs ENSDARG00000017813 718 1.48 0.752 - - - - - 0.728 - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
54. tmem258 ENSDARG00000078785 9578 1.479 - - - - - - 0.767 0.712 - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
55. ift57 ENSDARG00000021022 288 1.477 0.710 - - - - - 0.767 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
56. si:ch73-308b14.1 si:ch73-308b14.1 1106 1.472 - 0.714 - - - - 0.758 - -
57. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 1.472 - 0.706 - - - 0.766 - - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
58. 5_8S_rRNA 5_8S_rRNA 24 1.465 - 0.723 - - - 0.742 - - -
59. zgc:158852 ENSDARG00000102076 65 1.464 - - - - - 0.727 0.737 - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
60. zgc:172106 ENSDARG00000017984 90 1.462 0.750 - - - - 0.712 - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
61. tmem204 ENSDARG00000045273 42 1.461 - 0.706 - - - - 0.755 - - transmembrane protein 204 [Source:ZFIN;Acc:ZDB-GENE-040724-12]
62. ssna1 ENSDARG00000101300 403 1.458 0.748 - - - - 0.710 - - - Sjogren syndrome nuclear autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-081104-255]
63. lppr5a lppr5a 38 1.45 0.742 0.708 - - - - - - -
64. si:ch211-194k22.8 ENSDARG00000096711 1318 1.449 - - 0.725 - - - 0.724 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
65. zgc:173702_1 ENSDARG00000110229 24 1.448 - 0.706 - - - 0.742 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
66. si:ch211-87m7.2 ENSDARG00000030129 223 1.445 0.718 - - - - - 0.727 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
67. zmynd8 ENSDARG00000007601 405 1.428 0.728 0.700 - - - - - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
68. tax1bp1a ENSDARG00000098288 587 1.417 - 0.708 - - - 0.709 - - - Tax1 (human T-cell leukemia virus type I) binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-587]
69. RGL3 RGL3 422 0.983 - - - - - - - 0.983 -
70. RBBP8NL RBBP8NL 813 0.98 - - - - - - - 0.980 -
71. rgs12b ENSDARG00000036774 5088 0.971 - - - - - - - 0.971 - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
72. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.97 - - - - - - - 0.970 - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
73. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.968 - - - - - - - 0.968 - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
74. drg2 ENSDARG00000006642 1167 0.968 - - - - - - - 0.968 - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
75. uba5 ENSDARG00000063588 1260 0.966 - - - - - - - 0.966 - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
76. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.966 - - - - - - - 0.966 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
77. pabpn1 ENSDARG00000045373 4876 0.965 - - - - - - - 0.965 - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
78. elovl6l ENSDARG00000038639 1184 0.964 - - - - - - - 0.964 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
79. tom1 ENSDARG00000104581 1457 0.963 - - - - - - - 0.963 - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
80. ell ENSDARG00000000568 1404 0.963 - - - - - - - 0.963 - elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
81. hcst ENSDARG00000092074 172 0.962 - - - - - - - 0.962 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
82. CABZ01073405.1 CABZ01073405.1 275 0.962 - - - - - - - 0.962 -
83. smyd5 ENSDARG00000071669 1194 0.962 - - - - - - - 0.962 - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
84. PARP14 PARP14 164 0.962 - - - - - - - 0.962 -
85. zgc:113019 ENSDARG00000099743 994 0.962 - - - - - - - 0.962 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
86. hsd17b4 ENSDARG00000101239 301 0.961 - - - - - - - 0.961 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
87. slc6a11a ENSDARG00000074002 189 0.961 - - - - - - - 0.961 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
88. cxxc1l cxxc1l 1035 0.961 - - - - - - - 0.961 -
89. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.961 - - - - - - - 0.961 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
90. ftr23 ENSDARG00000067985 254 0.961 - - - - - - - 0.961 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
91. CLCC1 155 0.96 - - - - - - 0.960 - - chloride channel CLIC-like 1, transcript variant X2
92. wscd2 ENSDARG00000061819 304 0.96 - - - - - - - 0.960 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
93. pir ENSDARG00000056638 722 0.96 - - - - - - - 0.960 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
94. shmt1 ENSDARG00000052816 5463 0.96 - - - - - - - 0.960 - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]
95. prelid1b ENSDARG00000044169 501 0.96 - - - - - - - 0.960 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
96. golga4 ENSDARG00000075331 447 0.96 - - - - - - - 0.960 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
97. C6H1orf159 C6H1orf159 406 0.96 - - - - - - - 0.960 -
98. TAF4 TAF4 658 0.959 - - - - - - - 0.959 -
99. si:dkey-38p12.2 si:dkey-38p12.2 504 0.959 - - - - - - - 0.959 -
100. st6gal2 st6gal2 1570 0.959 - - - - - - - 0.959 -

There are 1692 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA