Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for zgc:113227

Gene Name Gene ID Reads Annotation
zgc:113227 ENSDARG00000058874 266 zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]










Genes with expression patterns similar to zgc:113227

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:113227 ENSDARG00000058874 266 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
2. lgi1a ENSDARG00000020493 1218 1.843 - 0.847 0.996 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
3. sprb ENSDARG00000058553 1694 1.823 - 0.846 0.977 - - - - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
4. pnn ENSDARG00000015851 1269 1.819 - - 0.993 - - 0.826 - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
5. mfsd4a mfsd4a 179 1.815 - 0.816 0.999 - - - - - -
6. appbp2 ENSDARG00000007566 1961 1.808 - - 0.972 - - 0.836 - - - amyloid beta precursor protein (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1715]
7. zgc:173709 86 1.79 - 0.853 - - - 0.937 - - - zgc:173709
8. inip ENSDARG00000028523 1925 1.78 - - 0.995 - - 0.785 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
9. CLIP4 ENSDARG00000096961 363 1.758 - - 0.997 - - 0.761 - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
10. cdr2l ENSDARG00000026834 254 1.722 - - - - 0.814 0.908 - - - cerebellar degeneration-related protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-8171]
11. nkiras2_1 ENSDARG00000052594 31 1.7 - 0.816 - - - 0.884 - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
12. SLC5A6 SLC5A6 179 1.693 - - - - 0.800 0.893 - - -
13. dbx2 2971 1.673 - 0.758 0.915 - - - - - - developing brain homeobox 2
14. slc27a6 ENSDARG00000046053 57 1.667 - - - - 0.783 0.884 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
15. CLSTN2 ENSDARG00000060637 41 1.661 - 0.816 - - - 0.845 - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
16. lrrc24 ENSDARG00000101704 224 1.659 - 0.860 - - - 0.799 - - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
17. igfbp5a ENSDARG00000039264, ENSDARG00000111203 117 1.656 - 0.816 - - - 0.840 - - - insulin-like growth factor binding protein 5a [Source:ZFIN;Acc:ZDB-GENE-070620-8]
18. nova1 ENSDARG00000020178 4129 1.638 - 0.794 0.844 - - - - - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
19. arl11l arl11l 31 1.626 - 0.816 - - 0.810 - - - -
20. IQCG ENSDARG00000068678 77 1.621 0.735 - - - - 0.886 - - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
21. eral1 ENSDARG00000059887 149 1.617 - - - - 0.782 0.835 - - - Era-like 12S mitochondrial rRNA chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-060526-84]
22. dhrs3a ENSDARG00000044982, ENSDARG00000109521 146 1.595 - - - - 0.729 0.866 - - - dehydrogenase/reductase (SDR family) member 3a [Source:ZFIN;Acc:ZDB-GENE-040801-217]
23. adcy5 ENSDARG00000091342 122 1.575 - - - - 0.793 0.782 - - - adenylate cyclase 5 [Source:ZFIN;Acc:ZDB-GENE-081104-470]
24. GAB2 ENSDARG00000105120 147 1.555 - 0.771 - - 0.784 - - - - GRB2-associated binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-756]
25. SNORA14 SNORA14 10 1.552 - 0.816 - - - - 0.736 - -
26. nova2 ENSDARG00000017673 7685 1.538 - 0.814 0.724 - - - - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
27. twist1b ENSDARG00000076010 88 1.514 - - - - - 0.758 0.756 - - twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
28. si:dkey-32m20.1 43 1.508 - 0.714 - - 0.794 - - - - si:dkey-32m20.1
29. zgc:73340 823 1.506 0.735 0.771 - - - - - - - zgc:73340
30. nkx1.2lb ENSDARG00000099427 220 1.414 - 0.705 - - 0.709 - - - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
31. neurod neurod 1189 1 - 1.000 - - - - - - -
32. EFCAB6 ENSDARG00000020735 34 1 - 1.000 - - - - - - - EF-hand calcium binding domain 6 [Source:ZFIN;Acc:ZDB-GENE-070828-2]
33. f2rl1.2 ENSDARG00000077540 822 0.999 - - 0.999 - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
34. gata1b ENSDARG00000059130 151 0.999 - - 0.999 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
35. zgc:171673 ENSDARG00000102473 256 0.999 - - 0.999 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
36. vipas39 ENSDARG00000103690 280 0.998 - - 0.998 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
37. lrp12 ENSDARG00000098845 999 0.998 - - 0.998 - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
38. SNX19 SNX19 350 0.998 - - 0.998 - - - - - -
39. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.998 - - 0.998 - - - - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
40. pld1b ENSDARG00000057125 325 0.998 - - 0.998 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
41. U1_25 U1_25 283 0.998 - - 0.998 - - - - - -
42. si:dkey-176f19.6 si:dkey-176f19.6 373 0.997 - - 0.997 - - - - - -
43. pycr1 pycr1 1258 0.997 - - 0.997 - - - - - -
44. RAB39B RAB39B 482 0.997 - - 0.997 - - - - - -
45. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.997 - - 0.997 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
46. CU467832.1 CU467832.1 635 0.997 - - 0.997 - - - - - -
47. sema3fa ENSDARG00000011163 759 0.997 - - 0.997 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
48. lipt1 ENSDARG00000025233 385 0.997 - - 0.997 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
49. dyrk1ab ENSDARG00000023814 1769 0.997 - - 0.997 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
50. DNAJC16 ENSDARG00000059699 507 0.997 - - 0.997 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
51. pkib ENSDARG00000053110 527 0.997 - - 0.997 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
52. PPP1R16B ENSDARG00000079860 390 0.997 - - 0.997 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
53. nrg1 ENSDARG00000104314 1081 0.997 - - 0.997 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
54. clybl ENSDARG00000029729 690 0.996 - - 0.996 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
55. fut8 fut8 652 0.996 - - 0.996 - - - - - -
56. phf12a ENSDARG00000074303 1025 0.996 - - 0.996 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
57. gga3 ENSDARG00000103667 675 0.995 - - 0.995 - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
58. klhl15 ENSDARG00000001930 793 0.995 - - 0.995 - - - - - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
59. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.995 - - 0.995 - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
60. PATZ1 ENSDARG00000076584 1116 0.995 - - 0.995 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
61. pou6f1 ENSDARG00000011570 1501 0.995 - - 0.995 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
62. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.995 - - 0.995 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
63. orc1 ENSDARG00000039217, ENSDARG00000115400 795 0.995 - - 0.995 - - - - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
64. MED8 ENSDARG00000114425 459 0.995 - - 0.995 - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
65. usp8 ENSDARG00000063719 643 0.995 - - 0.995 - - - - - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
66. smad4 smad4 2519 0.995 - - 0.995 - - - - - -
67. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.995 - - 0.995 - - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
68. pank1b ENSDARG00000010098 3202 0.995 - - 0.995 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
69. gins4 ENSDARG00000016044 671 0.994 - - 0.994 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
70. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.994 - - 0.994 - - - - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
71. PGBD4_3 PGBD4_3 861 0.994 - - 0.994 - - - - - -
72. qki2 ENSDARG00000010018 2230 0.994 - - 0.994 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
73. fignl1 ENSDARG00000016427 636 0.994 - - 0.994 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
74. hemk1 ENSDARG00000078894 397 0.994 - - 0.994 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
75. mrpl22 ENSDARG00000109961 1374 0.994 - - 0.994 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
76. selt1b 1396 0.994 - - 0.994 - - - - - - selenoprotein T, 1b
77. cln6a ENSDARG00000077584 1090 0.994 - - 0.994 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
78. tmem248 ENSDARG00000018825 1560 0.993 - - 0.993 - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
79. slain2 ENSDARG00000032114 798 0.993 - - 0.993 - - - - - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
80. gbas gbas 735 0.993 - - 0.993 - - - - - -
81. rhogc ENSDARG00000028401 2671 0.993 - - 0.993 - - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
82. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.993 - - 0.993 - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
83. znf410 ENSDARG00000008218 1807 0.993 - - 0.993 - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
84. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.992 - - 0.992 - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
85. actr10 ENSDARG00000038432 1598 0.992 - - 0.992 - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
86. phc2b_1 ENSDARG00000013224 1316 0.992 - - 0.992 - - - - - - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
87. pdzrn3b ENSDARG00000073869 1566 0.992 - - 0.992 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
88. wdhd1 ENSDARG00000015998 775 0.992 - - 0.992 - - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
89. NAIF1_1 NAIF1_1 1336 0.991 - - 0.991 - - - - - -
90. si:dkeyp-104h9.5 ENSDARG00000073801 722 0.991 - - 0.991 - - - - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
91. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 0.99 - - 0.990 - - - - - - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
92. mettl3 ENSDARG00000012827 728 0.99 - - 0.990 - - - - - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
93. setdb1a ENSDARG00000041243 1952 0.99 - - 0.990 - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
94. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 0.989 - - 0.989 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
95. smg5 ENSDARG00000041481 1286 0.989 - - 0.989 - - - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
96. CT573103.1 ENSDARG00000097550 950 0.989 - - 0.989 - - - - - -
97. si:ch211-238e22.1 si:ch211-238e22.1 1032 0.988 - - 0.988 - - - - - -
98. wu:fc26g07 wu:fc26g07 1165 0.988 - - 0.988 - - - - - -
99. eif4e3 ENSDARG00000005078 1624 0.988 - - 0.988 - - - - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
100. arid1b ENSDARG00000092503 1376 0.988 - - 0.988 - - - - - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]

There are 1447 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA