Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for whsc1

Gene Name Gene ID Reads Annotation
whsc1 1701 Wolf-Hirschhorn syndrome candidate 1










Genes with expression patterns similar to whsc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. whsc1 1701 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Wolf-Hirschhorn syndrome candidate 1
2. rbb4 rbb4 15541 3.218 0.881 - 0.754 - - - - 0.845 0.738
3. C1H4orf27 C1H4orf27 1961 3.14 - - 0.804 - - 0.796 - 0.831 0.709
4. sf3a1 ENSDARG00000041887 6702 2.446 - - - - - - 0.878 0.847 0.721 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
5. celsr1b ENSDARG00000058259 1219 2.438 - - - 0.886 - - - 0.846 0.706 cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
6. carm1 ENSDARG00000018698 5599 2.432 0.973 - - - 0.750 - 0.709 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
7. ep300b ENSDARG00000061108 5173 2.421 0.996 - 0.706 - - - 0.719 - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
8. dlb ENSDARG00000004232 5120 2.407 - - - - 0.720 - - 0.885 0.802 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
9. zcchc10 ENSDARG00000091092 1333 2.346 - 0.711 - - - - 0.762 0.873 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
10. parp1 ENSDARG00000019529 6787 2.333 - - 0.750 - 0.826 - - - 0.757 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
11. CCDC106 CCDC106 1908 2.309 - - - 0.740 - - 0.752 0.817 -
12. taf5 ENSDARG00000018325 1363 2.304 - - - - 0.743 - 0.820 0.741 - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
13. phf16 phf16 1116 2.269 - - 0.709 0.744 - - 0.816 - -
14. fam60al 2846 2.241 - - 0.789 0.742 0.710 - - - - family with sequence similarity 60, member A, like
15. cyp26c1 ENSDARG00000056029 1426 2.237 - - 0.721 - 0.762 - 0.754 - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
16. pcdh19 ENSDARG00000034344 2378 2.181 - - - 0.705 0.748 - - - 0.728 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
17. sin3b ENSDARG00000062472 2025 2.179 - - - - - 0.704 0.729 - 0.746 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
18. smarcad1 smarcad1 1457 2.171 - - 0.749 - 0.717 - - - 0.705
19. whsc1l1 8544 2.159 - - - - - 0.712 0.728 - 0.719 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
20. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.835 0.995 - - - - - - 0.840 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
21. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.811 0.988 - - - - - 0.823 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
22. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.797 0.967 - - - - - - 0.830 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
23. nova1 ENSDARG00000020178 4129 1.792 0.987 - - - - - - 0.805 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
24. tctex1d1 ENSDARG00000103545 409 1.789 0.997 - - - - - 0.792 - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
25. brd4 ENSDARG00000078904 5367 1.786 0.964 - - - - - 0.822 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
26. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.759 0.991 - - - - - - - 0.768 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
27. HDAC5 ENSDARG00000075139 1287 1.758 0.995 - - - - - 0.763 - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
28. CU571336.1 ENSDARG00000099892 2164 1.756 0.989 - - - - - 0.767 - -
29. IWS1 2428 1.733 - - - - - - 0.803 0.930 - IWS1, SUPT6H interacting protein, transcript variant X2
30. taf7 ENSDARG00000019572 1305 1.73 0.990 - - - - - - 0.740 - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
31. ppp2r2a ppp2r2a 5785 1.73 0.984 - 0.746 - - - - - -
32. cgnl1 ENSDARG00000015805 856 1.729 0.987 0.742 - - - - - - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
33. phf12a ENSDARG00000074303 1025 1.721 0.996 - - - - 0.725 - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
34. psmc1a ENSDARG00000030537 2799 1.721 0.981 - - - - - 0.740 - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
35. ppp4cb ENSDARG00000076439 1693 1.718 0.970 0.748 - - - - - - - protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
36. gbx1 ENSDARG00000071418 871 1.718 0.998 - - 0.720 - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
37. tarbp2 ENSDARG00000070471 1946 1.703 0.994 - - - - - 0.709 - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
38. ppp1cab ENSDARG00000071566 4350 1.692 0.974 - - - - - 0.718 - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
39. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.691 0.960 - - - - - - 0.731 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
40. MARK4 ENSDARG00000024966 3377 1.684 0.967 - - - - - - - 0.717 microtubule affinity regulating kinase 4 [Source:HGNC Symbol;Acc:HGNC:13538]
41. fgfr2 ENSDARG00000058115 6743 1.682 0.950 - 0.732 - - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
42. kpna2 ENSDARG00000038066 7954 1.675 0.943 - - - - - - - 0.732 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
43. gas2l3 ENSDARG00000045880 614 1.669 - - - 0.796 - - - 0.873 - growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
44. fam219aa ENSDARG00000016396 1788 1.662 - - - - - - 0.833 0.829 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
45. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.654 - - - - 0.764 - - 0.890 - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
46. dkc1 ENSDARG00000016484 7088 1.647 0.942 - - - - - 0.705 - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
47. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.646 - 0.819 - - - - 0.827 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
48. dnmbp ENSDARG00000074121 2711 1.646 - - - - - - 0.876 0.770 - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
49. EPHB3 2215 1.638 - - - - - - 0.790 0.848 - EPH receptor B3
50. esco2 ENSDARG00000014685 1971 1.637 - - 0.785 - - - - 0.852 - establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
51. safb ENSDARG00000020467 5608 1.632 - - - - - - - 0.863 0.769 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
52. pik3c2b ENSDARG00000086927 864 1.631 - - - - - - 0.782 0.849 - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
53. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.627 - - - 0.802 - - - 0.825 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
54. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.617 - - - - - 0.774 - 0.843 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
55. cdk2ap2 ENSDARG00000103145 8024 1.616 - - - - - - 0.837 - 0.779 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
56. asap1a ENSDARG00000029463 1566 1.615 - - - - - - 0.772 0.843 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
57. med22 ENSDARG00000014148 1307 1.613 - - - - - - - 0.856 0.757 mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
58. med29 ENSDARG00000026448, ENSDARG00000109733 972 1.612 - - - - - - 0.761 0.851 - mediator complex subunit 29 [Source:ZFIN;Acc:ZDB-GENE-021217-1]
59. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.61 - - - - - - 0.737 0.873 - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
60. CR954963.1 ENSDARG00000097153 1135 1.609 - - - - - - 0.770 0.839 -
61. ogfr ENSDARG00000037837 1001 1.608 - - - 0.775 - - - 0.833 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
62. cbfb ENSDARG00000040917 1422 1.606 - - - - - - 0.772 0.834 - core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
63. cpsf5 cpsf5 1841 1.606 - 0.719 - - - 0.887 - - -
64. cln8 ENSDARG00000075525, ENSDARG00000113042 601 1.601 - - - 0.746 - - - 0.855 - CLN8, transmembrane ER and ERGIC protein [Source:ZFIN;Acc:ZDB-GENE-060906-3]
65. zgc:111974 zgc:111974 1386 1.6 - - - - - - 0.805 0.795 -
66. sh2d3ca ENSDARG00000028099 1037 1.595 - - 0.732 - - - 0.863 - - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
67. rab11fip4a ENSDARG00000090170 839 1.595 - - - - - - 0.882 0.713 - RAB11 family interacting protein 4 (class II) a [Source:ZFIN;Acc:ZDB-GENE-040718-266]
68. sae1 ENSDARG00000010487 2028 1.595 - - - - - - 0.735 0.860 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
69. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.592 - - - - - - - 0.817 0.775 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
70. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.589 - - - 0.704 - - - 0.885 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
71. rnmt ENSDARG00000070553 1743 1.588 - - - - - - 0.878 - 0.710 RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
72. alg10 ENSDARG00000053917 491 1.574 - - - - - 0.758 0.816 - - asparagine-linked glycosylation 10 [Source:ZFIN;Acc:ZDB-GENE-110310-8]
73. zgc:110540 ENSDARG00000054929 2154 1.572 - - - - - - 0.822 - 0.750 zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
74. daxx ENSDARG00000000729 734 1.569 - - - - - - 0.733 0.836 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
75. tmem201 ENSDARG00000077307 453 1.567 - - - 0.793 - - 0.774 - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
76. mtfr2 ENSDARG00000060394 482 1.563 - - - - - - 0.726 0.837 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
77. cldn5a ENSDARG00000043716 3865 1.562 - - - 0.721 - - - 0.841 - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
78. sb:cb54 sb:cb54 475 1.562 - - - - - - - 0.832 0.730
79. si:ch211-127i16.1 si:ch211-127i16.1 228 1.561 - 0.791 - - - - 0.770 - -
80. IER2 IER2 604 1.561 - - - - - 0.823 0.738 - -
81. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.561 - - - - - 0.719 - 0.842 - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
82. CR478286.1_1 CR478286.1_1 306 1.561 - - 0.728 0.833 - - - - -
83. atad5a ENSDARG00000070568 1840 1.559 - - - - - - 0.831 - 0.728 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
84. ldb1a ENSDARG00000010137 3035 1.559 - - - - 0.721 - - - 0.838 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
85. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.558 - - - - - 0.778 0.780 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
86. eif2s1a ENSDARG00000005827 5992 1.557 - - - 0.770 - - - - 0.787 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
87. btbd10a ENSDARG00000062674 1144 1.556 - - - 0.763 - - 0.793 - - BTB (POZ) domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-070410-41]
88. e2f7 ENSDARG00000008986 1439 1.553 - - - - - 0.728 - 0.825 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
89. igdcc3 ENSDARG00000075158 1921 1.552 - 0.729 - 0.823 - - - - - immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
90. brd1b ENSDARG00000051798 1712 1.552 - - - - - - 0.802 - 0.750 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
91. tmem145 ENSDARG00000088342 183 1.552 - - - - - 0.745 - 0.807 - transmembrane protein 145 [Source:ZFIN;Acc:ZDB-GENE-110411-84]
92. ENGASE ENSDARG00000010035 232 1.552 - - - - - - 0.737 0.815 - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
93. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 1.551 - 0.797 - - - - 0.754 - - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
94. gpr37l1a ENSDARG00000006079 422 1.549 - - - - 0.708 - - 0.841 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
95. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.545 - - 0.715 - - - - 0.830 - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
96. ccdc94 1417 1.545 - - - 0.724 - - - 0.821 - coiled-coil domain containing 94
97. mtfr1l ENSDARG00000003940, ENSDARG00000111141 3047 1.543 - - - - - - 0.761 0.782 - mitochondrial fission regulator 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-6228]
98. r3hdm1 ENSDARG00000101458 5241 1.541 - - - - - - 0.836 - 0.705 R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
99. nin ENSDARG00000060298 1558 1.541 - - - - 0.731 - 0.810 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
100. smarca5 ENSDARG00000052348 15433 1.54 - - - - - - 0.805 - 0.735 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]

There are 1783 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA