Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vps4b

Gene Name Gene ID Reads Annotation
vps4b ENSDARG00000069175 1922 vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]










Genes with expression patterns similar to vps4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps4b ENSDARG00000069175 1922 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
2. capn2b ENSDARG00000055592 5431 3.328 0.710 0.981 - - - - 0.790 0.847 - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
3. mtpn ENSDARG00000104018 4264 2.755 - 0.984 - - - - 0.865 0.906 - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
4. slc1a5 ENSDARG00000099186 7580 2.644 - 0.972 - - - - 0.705 0.967 - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
5. si:ch211-226m16.2 ENSDARG00000036785 2163 2.44 - - - - - 0.788 0.752 0.900 - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
6. APOA4_1 APOA4_1 3645 2.346 - 0.906 - - - 0.731 0.709 - -
7. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.981 - 0.994 - - - - - 0.987 -
8. cenpl ENSDARG00000038802 696 1.954 - 0.983 - - - - - 0.971 - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
9. rgs12b ENSDARG00000036774 5088 1.933 - 0.967 - - - - - 0.966 - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
10. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.837 - 0.955 - - - - 0.882 - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
11. prrx1b ENSDARG00000042027 1128 1.831 - 0.983 - - - - 0.848 - - paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]
12. srebf2 ENSDARG00000063438 1982 1.827 - - - - - - 0.842 0.985 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
13. copg2 ENSDARG00000034823 4162 1.796 - 0.951 - - - - 0.845 - - coatomer protein complex, subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-000208-8]
14. gna12a ENSDARG00000025826 1769 1.779 - 0.974 - - - - 0.805 - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
15. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.775 - - - - - - 0.803 0.972 - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
16. sly1 sly1 2403 1.775 - - - - - - 0.784 0.991 -
17. osgn1 ENSDARG00000052279 5607 1.771 - - - - - - 0.851 0.920 - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
18. cnp ENSDARG00000070822 649 1.766 - - - - - 0.783 - 0.983 - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
19. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 1.761 - - - - - - 0.782 0.979 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
20. aqp3a ENSDARG00000003808 9044 1.758 - 0.948 - - - - 0.810 - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
21. SKA2 ENSDARG00000114038 1448 1.752 - 0.975 - - - 0.777 - - - spindle and kinetochore associated complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041008-202]
22. esrp1 ENSDARG00000011245 2097 1.749 - 0.992 - - - - 0.757 - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
23. flot2a ENSDARG00000004830 5276 1.734 - 0.929 - - - - - 0.805 - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
24. si:dkey-204f11.64 ENSDARG00000094695 586 1.727 - - - - - 0.741 - 0.986 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
25. vimp 4034 1.721 - 0.923 - - - - 0.798 - - VCP-interacting membrane selenoprotein
26. pikfyve ENSDARG00000056112 1583 1.72 - 0.963 - - - - 0.757 - - phosphoinositide kinase, FYVE finger containing [Source:ZFIN;Acc:ZDB-GENE-030131-9636]
27. rnf128a ENSDARG00000016867 3146 1.704 - 0.948 - - - - 0.756 - - ring finger protein 128a [Source:ZFIN;Acc:ZDB-GENE-030131-1044]
28. chmp4b chmp4b 5318 1.703 - - - - - - 0.771 0.932 -
29. padi2 ENSDARG00000044167 6765 1.702 - 0.942 - - - - - 0.760 - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
30. arcn1b ENSDARG00000031214 4529 1.699 - 0.964 - - - - 0.735 - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
31. sar1b ENSDARG00000103403 1699 1.696 - 0.985 - - - 0.711 - - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
32. tmem176l.4 ENSDARG00000074390 1886 1.695 - 0.952 - - - 0.743 - - - transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
33. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.694 - 0.866 - - - - 0.828 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
34. rnf10 ENSDARG00000079687 6768 1.694 - 0.887 - - - - - 0.807 - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
35. TAF4 TAF4 658 1.694 - - - - - 0.705 - 0.989 -
36. paxip1 ENSDARG00000005606 1417 1.693 - - - - - 0.707 - 0.986 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
37. diabloa ENSDARG00000104172 2192 1.692 - 0.901 - - - - 0.791 - - diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303]
38. eps8l1 1598 1.691 - - - - - - 0.752 0.939 - eps8-like1, transcript variant X3
39. SLC25A24 ENSDARG00000008568 2005 1.687 - - - - - - 0.738 0.949 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
40. tpst1 ENSDARG00000073872 2490 1.677 - 0.973 - - - - 0.704 - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
41. prkcsh ENSDARG00000004470 1424 1.674 - - - - - 0.723 - 0.951 - protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
42. efhd1 ENSDARG00000043446 703 1.666 - - - - - 0.822 0.844 - - EF-hand domain family, member D1 [Source:ZFIN;Acc:ZDB-GENE-030131-7461]
43. epas1a ENSDARG00000008697 3225 1.663 - 0.935 - - - - 0.728 - - endothelial PAS domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4490]
44. sb:cb37 ENSDARG00000041645 2018 1.656 - 0.949 - - - - 0.707 - - sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
45. zgc:55512 zgc:55512 4436 1.654 - - - - - - 0.773 0.881 -
46. ankhd1 ENSDARG00000077860 5510 1.646 - 0.930 - - - - - 0.716 - ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
47. coro7 ENSDARG00000089616 2141 1.645 - - - - - - 0.700 0.945 - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
48. dusp7 ENSDARG00000101413 1307 1.644 - - - - - - 0.704 0.940 - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
49. TBC1D24 ENSDARG00000069339 1300 1.641 - - - - - 0.791 0.850 - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
50. letm2 ENSDARG00000077515 9561 1.64 - - - - - - 0.712 0.928 - leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
51. rab5c ENSDARG00000026712 4733 1.639 - 0.863 - - - - 0.776 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
52. prelid1a ENSDARG00000098671 4745 1.635 - - - - - - 0.735 0.900 - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
53. gabarapl2 ENSDARG00000027200 5120 1.625 - - - - - - 0.749 0.876 - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
54. irs1 ENSDARG00000054087 1809 1.624 - - - - - 0.832 0.792 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
55. atp6v1aa ENSDARG00000034534, ENSDARG00000113437 1443 1.618 - 0.876 - - - - 0.742 - - ATPase H+ transporting V1 subunit Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1143]
56. HHLA2_2 HHLA2_2 857 1.618 0.755 - - - - - 0.863 - -
57. anxa1a ENSDARG00000026726 23173 1.606 - 0.783 - - - - 0.823 - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
58. PRSS16 ENSDARG00000076602 963 1.604 - - - - - 0.841 0.763 - - serine protease 16 [Source:ZFIN;Acc:ZDB-GENE-070112-732]
59. CLEC4A CLEC4A 1016 1.598 - - - - - 0.793 0.805 - -
60. cables2a ENSDARG00000076964 1330 1.595 - - - - - 0.875 0.720 - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
61. timp2a ENSDARG00000061226, ENSDARG00000114336 1756 1.593 - - - - - - 0.731 0.862 - TIMP metallopeptidase inhibitor 2a [Source:ZFIN;Acc:ZDB-GENE-030612-1]
62. nudt5 ENSDARG00000078073 779 1.592 - - - - - 0.720 0.872 - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]
63. xbp1 ENSDARG00000035622 18416 1.59 - - - - - - 0.873 0.717 - X-box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-011210-2]
64. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.585 0.790 - - - - - 0.795 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
65. si:dkey-58f10.12 ENSDARG00000092680 258 1.575 - - - - - 0.766 0.809 - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
66. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.567 - - - - - - 0.830 0.737 - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
67. PTGFRN_1 ENSDARG00000075505 1447 1.564 0.728 - - - - 0.836 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
68. anapc16 ENSDARG00000013822 5857 1.564 - - - - - - 0.727 0.837 - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
69. mxra5a ENSDARG00000074815 628 1.558 0.762 - - - - 0.796 - - - matrix-remodelling associated 5a [Source:ZFIN;Acc:ZDB-GENE-090312-22]
70. CU915738.1 CU915738.1 3723 1.556 - - - - - - 0.717 0.839 -
71. tmed9 ENSDARG00000004261 10013 1.54 - - - - - - 0.798 0.742 - transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
72. cldne ENSDARG00000043128 6960 1.524 - - - - - - 0.822 0.702 - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
73. itm2bb ENSDARG00000041505 2734 1.523 - - - - - - 0.705 0.818 - integral membrane protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2139]
74. serhl ENSDARG00000032340 1241 1.514 - - - - - 0.780 0.734 - - serine hydrolase-like [Source:ZFIN;Acc:ZDB-GENE-030131-1368]
75. cyp2aa9 ENSDARG00000098890 839 1.5 - - - - - 0.715 0.785 - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
76. slc27a2a ENSDARG00000036237 166 1.498 - - - - - 0.756 0.742 - - solute carrier family 27 (fatty acid transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-050706-104]
77. cstf1 ENSDARG00000044820 1663 1.496 0.727 - - - - 0.769 - - - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
78. MIA ENSDARG00000052437, ENSDARG00000116215 1220 1.49 - - - - - 0.749 0.741 - - MIA SH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-081022-66]
79. gorasp2 ENSDARG00000015126 3923 1.488 - - - - - 0.786 0.702 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
80. cnih4 ENSDARG00000087759 3937 1.487 - - - - - 0.723 0.764 - - cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
81. slc25a1b ENSDARG00000076381 6213 1.484 - 0.742 - - - - 0.742 - - slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
82. lgals2b ENSDARG00000038153 2196 1.483 - - - - - - 0.702 0.781 - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
83. boka ENSDARG00000052129 1246 1.478 - - - - - 0.714 0.764 - - BOK, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-040801-131]
84. zgc:64189 ENSDARG00000033501 244 1.473 - - - - - 0.708 0.765 - - zgc:64189 [Source:ZFIN;Acc:ZDB-GENE-040426-1397]
85. nek7 ENSDARG00000056966 816 1.466 - - - - - 0.741 0.725 - - NIMA-related kinase 7 [Source:ZFIN;Acc:ZDB-GENE-040801-136]
86. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.452 - - - - - 0.709 0.743 - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
87. ssr4 ENSDARG00000019444 20207 1.415 - - - - - 0.713 0.702 - - signal sequence receptor, delta [Source:ZFIN;Acc:ZDB-GENE-030131-4900]
88. CIDEC ENSDARG00000059651, ENSDARG00000110335 418 0.994 - 0.994 - - - - - - - cell death-inducing DFFA-like effector c [Source:ZFIN;Acc:ZDB-GENE-030131-4591]
89. si:dkey-3h3.3 ENSDARG00000067718 225 0.994 - - - - - - - 0.994 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
90. GGT7 ENSDARG00000115805 481 0.993 - - - - - - - 0.993 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
91. C17H15orf57 C17H15orf57 1366 0.992 - - - - - - - 0.992 -
92. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.992 - - - - - - - 0.992 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
93. erlin1 ENSDARG00000021991 5664 0.992 - 0.992 - - - - - - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
94. AIFM2 ENSDARG00000077549 1419 0.991 - - - - - - - 0.991 - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
95. clcn5 clcn5 492 0.991 - 0.991 - - - - - - -
96. PARP14 PARP14 164 0.99 - - - - - - - 0.990 -
97. tnfaip2a ENSDARG00000043416 688 0.99 - 0.990 - - - - - - - tumor necrosis factor, alpha-induced protein 2a [Source:ZFIN;Acc:ZDB-GENE-041210-301]
98. nr2f1a ENSDARG00000052695 5037 0.99 - 0.990 - - - - - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
99. slc6a11a ENSDARG00000074002 189 0.99 - - - - - - - 0.990 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
100. zgc:113019 ENSDARG00000099743 994 0.99 - - - - - - - 0.990 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]

There are 1305 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA