Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vps39

Gene Name Gene ID Reads Annotation
vps39 ENSDARG00000074471 684 vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]










Genes with expression patterns similar to vps39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vps39 ENSDARG00000074471 684 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
2. tdrd3 ENSDARG00000025421 633 2.403 - 0.751 - 0.923 - - - 0.729 - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
3. rac3b ENSDARG00000020795 1523 2.377 - 0.829 - 0.842 - 0.706 - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
4. bub1bb ENSDARG00000074927 1667 2.29 - 0.757 - - - 0.753 0.780 - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
5. cxadr ENSDARG00000043658, ENSDARG00000110210, ENSDARG00000111984 451 2.189 - - - - - 0.736 0.746 - 0.707 CXADR, Ig-like cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-020814-2]
6. ppp1r14bb ENSDARG00000030161 2349 2.169 - 0.735 - - - 0.713 - 0.721 - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
7. PARD3B PARD3B 401 1.812 - 0.901 - 0.911 - - - - -
8. lrrfip2 ENSDARG00000010400 2633 1.775 - 0.879 - 0.896 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
9. CABZ01062452.1 CABZ01062452.1 1721 1.732 - 0.864 - 0.868 - - - - -
10. zdhhc6 ENSDARG00000075721 1494 1.719 - 0.800 - 0.919 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
11. ptgs2a ENSDARG00000004539 1207 1.719 - 0.934 - - - 0.785 - - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
12. KPNA6 ENSDARG00000044980 543 1.689 - - - 0.936 - - - 0.753 - karyopherin alpha 6 (importin alpha 7) [Source:ZFIN;Acc:ZDB-GENE-130530-626]
13. zdhhc17 ENSDARG00000070441 1073 1.684 - 0.796 - 0.888 - - - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
14. cib1 ENSDARG00000103118 291 1.678 - 0.869 - - - 0.809 - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
15. pdcd10b ENSDARG00000012591 3395 1.671 - - - 0.868 - 0.803 - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
16. gnav1 ENSDARG00000043006 305 1.646 - - - 0.920 - 0.726 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
17. pik3c3 ENSDARG00000054829 559 1.645 - - - 0.838 - 0.807 - - - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
18. phf10 ENSDARG00000070084 1210 1.644 - - - 0.889 - 0.755 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
19. epb41l4a ENSDARG00000040087 1013 1.638 - 0.769 - 0.869 - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
20. fignl1 ENSDARG00000016427 636 1.637 - - - - - 0.752 0.885 - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
21. CEP350 ENSDARG00000058000 2887 1.633 - 0.884 - - - - 0.749 - - centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
22. bbs4 ENSDARG00000063522 247 1.632 - 0.758 - 0.874 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
23. si:dkey-100n10.2 101 1.63 - - - 0.915 - 0.715 - - - si:dkey-100n10.2
24. CABZ01038514.1 CABZ01038514.1 724 1.614 - - - 0.823 - 0.791 - - -
25. C1H10orf12 C1H10orf12 1663 1.609 - - - 0.862 - 0.747 - - -
26. ZC3H12A_1 ZC3H12A_1 558 1.608 - 0.864 - - - - - 0.744 -
27. ARHGAP23 ARHGAP23 3946 1.607 - 0.801 - - - 0.806 - - -
28. TMEM185A TMEM185A 5505 1.588 - - - 0.799 - 0.789 - - -
29. cwc25 ENSDARG00000003382 2134 1.585 - - - 0.867 - 0.718 - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
30. btr30 ENSDARG00000102591 506 1.582 - 0.864 - - - - 0.718 - - bloodthirsty-related gene family, member 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1407]
31. bcl7ba ENSDARG00000111877 3696 1.578 - 0.740 - - - - 0.838 - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
32. C11H9orf89 C11H9orf89 477 1.577 - 0.780 - - - - 0.797 - -
33. cxxc1 cxxc1 914 1.574 - 0.713 - 0.861 - - - - -
34. si:dkey-56e3.3 ENSDARG00000075194 491 1.573 - - - 0.786 - - 0.787 - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
35. exoc3 ENSDARG00000014582, ENSDARG00000114378, ENSDARG00000117037 1155 1.571 - 0.858 - - - - 0.713 - - exocyst complex component 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5947]
36. NRBP2 NRBP2 127 1.57 - 0.833 - - - 0.737 - - -
37. ctdspla ENSDARG00000071673 1447 1.563 - 0.757 - 0.806 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
38. fam43a ENSDARG00000043009 792 1.555 - 0.774 - - - 0.781 - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
39. cmah ENSDARG00000057714 852 1.546 - - - 0.750 - 0.796 - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
40. hint2 ENSDARG00000100938 1053 1.542 - 0.774 - - - - - 0.768 - histidine triad nucleotide binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070410-139]
41. CR548630.1 CR548630.1 3301 1.542 - 0.714 - 0.828 - - - - -
42. galnt2 ENSDARG00000003829 891 1.54 - - - 0.817 - 0.723 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041111-110]
43. birc5a ENSDARG00000075621 2256 1.539 - - - 0.748 - 0.791 - - - baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
44. smim7 ENSDARG00000074848 1260 1.539 - 0.832 - - - - - - 0.707 small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
45. ca16b ENSDARG00000060123 389 1.536 - 0.820 - - - 0.716 - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
46. sin3ab ENSDARG00000059812 2140 1.532 - - - 0.749 - 0.783 - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
47. sema5a ENSDARG00000058821 333 1.531 - 0.769 - - - - 0.762 - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
48. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.53 - 0.760 - 0.770 - - - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
49. ARFGAP1 ENSDARG00000101616 2952 1.529 - 0.706 - - - 0.823 - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
50. zic5 ENSDARG00000016022 1034 1.524 - 0.823 - - - 0.701 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
51. cdk12 ENSDARG00000063726 1220 1.524 - - - - - 0.808 - 0.716 - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
52. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.523 - - - 0.797 - 0.726 - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
53. efnb2b_1 ENSDARG00000074050 1094 1.521 - - - 0.739 - 0.782 - - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
54. fbln2 ENSDARG00000015156 1694 1.521 - 0.744 - - - 0.777 - - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
55. zfyve27 ENSDARG00000059835 604 1.52 - 0.785 - - - 0.735 - - - zinc finger, FYVE domain containing 27 [Source:ZFIN;Acc:ZDB-GENE-061013-502]
56. gspt1 ENSDARG00000031048, ENSDARG00000109388 2735 1.517 - 0.774 - 0.743 - - - - - G1 to S phase transition 1 [Source:ZFIN;Acc:ZDB-GENE-040822-36]
57. smad7 ENSDARG00000016858 1660 1.517 - 0.792 - - - 0.725 - - - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
58. prelid1b ENSDARG00000044169 501 1.517 - 0.764 - - - 0.753 - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
59. tubg1 ENSDARG00000015610 2433 1.515 - 0.772 - - - 0.743 - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
60. cog7 ENSDARG00000061372 789 1.504 - 0.786 - - - 0.718 - - - component of oligomeric golgi complex 7 [Source:ZFIN;Acc:ZDB-GENE-061013-463]
61. yipf5 ENSDARG00000007279 2334 1.504 - 0.801 - - - 0.703 - - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
62. dctn4 ENSDARG00000023988 860 1.502 - 0.715 - - - 0.787 - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
63. chst13 chst13 669 1.498 - - - - - 0.719 0.779 - -
64. RNF38 ENSDARG00000062055 3901 1.497 - 0.796 - - - 0.701 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
65. si:ch211-282j22.3 ENSDARG00000010524 1007 1.497 - - - 0.740 - 0.757 - - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
66. WAPAL WAPAL 1888 1.497 - 0.735 - 0.762 - - - - -
67. fgf17 ENSDARG00000102778 136 1.484 - - - - - 0.748 - - 0.736 fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
68. shc2 ENSDARG00000062080, ENSDARG00000111448 426 1.483 - - - - - 0.750 0.733 - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
69. C18H16orf70 C18H16orf70 542 1.483 - 0.750 - - - 0.733 - - -
70. med13b ENSDARG00000003910 1143 1.482 - - - - - 0.735 - 0.747 - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
71. ldb1a ENSDARG00000010137 3035 1.478 - 0.760 - 0.718 - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
72. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 1.475 - - - 0.736 - 0.739 - - - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
73. KCTD14 ENSDARG00000110240 122 1.475 - 0.720 - - - 0.755 - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
74. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.468 - 0.743 - - - 0.725 - - - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
75. lmbr1l ENSDARG00000004745 861 1.468 - 0.763 - - - 0.705 - - - limb development membrane protein 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9906]
76. usp1 ENSDARG00000056414 1816 1.464 - 0.756 - 0.708 - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
77. prkci ENSDARG00000021225 2472 1.458 - - - 0.713 - - 0.745 - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
78. ablim1a ENSDARG00000060149 228 1.457 - - - - - 0.731 - 0.726 - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
79. golga7 ENSDARG00000057676 4691 1.456 - - - 0.741 - 0.715 - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
80. rps6ka3b ENSDARG00000057927, ENSDARG00000109970 812 1.453 0.709 - - - - 0.744 - - - ribosomal protein S6 kinase, polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-070209-74]
81. crcp ENSDARG00000069373 730 1.451 - 0.748 - - - - 0.703 - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
82. slc1a1 ENSDARG00000020212 104 1.445 - - - - - 0.728 - 0.717 - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
83. ubtf ENSDARG00000035066 4070 1.444 - 0.709 - - - 0.735 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
84. casc3 ENSDARG00000029911 1174 1.444 - 0.726 - - - 0.718 - - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
85. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 1.439 - - - - - 0.712 0.727 - - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
86. lrrc59 ENSDARG00000071426, ENSDARG00000109955 1998 1.435 - - - - - - 0.723 0.712 - leucine rich repeat containing 59 [Source:ZFIN;Acc:ZDB-GENE-040426-2547]
87. kif18a ENSDARG00000008022 546 1.435 - - - - - 0.721 0.714 - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
88. sacs ENSDARG00000091042 314 1.434 - - - - - 0.723 - - 0.711 sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
89. znf384l ENSDARG00000001015 137 1.433 - - - - - - 0.728 0.705 - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
90. KAT5 KAT5 623 1.43 - - - - - 0.715 - - 0.715
91. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.424 - 0.704 - - - 0.720 - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
92. KCNAB2 KCNAB2 129 1.416 - - - - - 0.712 - 0.704 -
93. cx34.4 ENSDARG00000075854 168 1.411 - - - - - 0.700 0.711 - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
94. ulk1b ENSDARG00000074481 1212 1.408 - 0.703 - - - - - - 0.705 unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
95. TMEM106C ENSDARG00000098105 793 0.944 - - - 0.944 - - - - - transmembrane protein 106C [Source:ZFIN;Acc:ZDB-GENE-061013-562]
96. si:ch211-120p12.3 1079 0.943 - 0.943 - - - - - - - si:ch211-120p12.3, transcript variant X2
97. CU633775.1 ENSDARG00000113543 319 0.938 - - - 0.938 - - - - -
98. e2f8 ENSDARG00000057323 1432 0.938 - 0.938 - - - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
99. ube2z ENSDARG00000029215 1059 0.938 - - - 0.938 - - - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
100. cmtm6 ENSDARG00000099631 641 0.936 - - - 0.936 - - - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]

There are 1818 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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