Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vgf

Gene Name Gene ID Reads Annotation
vgf ENSDARG00000105529 247 VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]










Genes with expression patterns similar to vgf

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vgf ENSDARG00000105529 247 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
2. SPOCK1 ENSDARG00000074644 794 3.526 0.712 0.937 - - - 0.929 0.948 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
3. celf4 ENSDARG00000070045 1537 3.469 0.850 0.864 - - - 0.782 0.973 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
4. nrxn3b ENSDARG00000062693 192 3.463 0.887 0.947 - - - 0.747 0.882 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
5. prrt1 ENSDARG00000062208 368 3.388 0.736 0.906 - - - 0.767 0.979 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
6. dync1i1 ENSDARG00000060948 554 3.308 0.799 0.736 - - - 0.845 0.928 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
7. isl1 ENSDARG00000004023 981 3.274 0.892 0.738 - - - 0.800 0.844 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
8. ROBO3_1 ROBO3_1 468 3.229 0.702 - - 0.791 - 0.828 0.908 - -
9. SYT2 ENSDARG00000014169 265 3.208 0.750 0.887 - - - 0.770 0.801 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
10. MAPK8IP1_1 MAPK8IP1_1 186 3.189 0.711 - - 0.891 - 0.796 0.791 - -
11. syt4 ENSDARG00000036505 421 3.018 - 0.719 - 0.851 - 0.717 0.731 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
12. pcdh1gc5 ENSDARG00000104826 10052 2.823 0.941 - - - - 0.916 0.966 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
13. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.782 0.942 - - - - 0.898 0.942 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
14. CHL1 CHL1 1553 2.764 0.919 - - - - 0.941 0.904 - -
15. nova2 ENSDARG00000017673 7685 2.749 0.839 - - - - 0.938 0.972 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
16. vim ENSDARG00000010008 3551 2.741 0.864 - - - - 0.959 0.918 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
17. tuba1c ENSDARG00000055216 8384 2.739 0.842 - - - - 0.953 0.944 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
18. epha4b ENSDARG00000011600 3110 2.721 0.834 - - - - 0.960 0.927 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
19. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.72 0.828 - - - - 0.937 0.955 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
20. BX957337.1 BX957337.1 1685 2.713 0.937 - - - - 0.862 0.914 - -
21. rusc1 ENSDARG00000078125 617 2.712 0.830 - - - - 0.952 0.930 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
22. nadl1.1 1200 2.71 0.787 - - - - 0.956 0.967 - - neural adhesion molecule L1.1, transcript variant X1
23. stx1b ENSDARG00000000503 2724 2.704 0.870 - - - - 0.909 0.925 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
24. slc1a3a ENSDARG00000104431 9888 2.702 0.822 - - - - 0.933 0.947 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
25. nes ENSDARG00000088805 2710 2.7 0.786 - - - - 0.938 0.976 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
26. ZFHX3 ENSDARG00000103057 7759 2.697 0.841 - - - - 0.931 0.925 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
27. AGO1 ENSDARG00000092644 4521 2.696 0.846 - - - - 0.887 0.963 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
28. C8H1orf106 C8H1orf106 2690 2.694 0.838 - - - - 0.884 0.972 - -
29. msi1 ENSDARG00000010710 2634 2.69 0.808 - - - - 0.950 0.932 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
30. ckbb ENSDARG00000043257 3503 2.688 0.888 - - - - 0.934 0.866 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
31. scn8aa ENSDARG00000005775 792 2.687 0.828 - - - - 0.965 0.894 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
32. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.687 0.862 - - - - 0.857 0.968 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
33. myt1b ENSDARG00000102879 5411 2.684 0.829 - - - - 0.923 0.932 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
34. atp6v0cb ENSDARG00000036577 3472 2.676 0.785 - - - - 0.925 0.966 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
35. dnajc5aa ENSDARG00000042948 2885 2.671 0.820 - - - - 0.903 0.948 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
36. cbln1 ENSDARG00000057296 165 2.67 - 0.947 - 0.867 - - 0.856 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
37. slc18a3a ENSDARG00000006356 1285 2.67 0.793 - - - - 0.913 0.964 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
38. EFCC1 ENSDARG00000077826 1359 2.669 0.919 - - - - 0.860 0.890 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
39. syt11a ENSDARG00000057913 1145 2.668 0.824 - - - - 0.876 0.968 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
40. Sep-03 Sep-03 1124 2.668 0.826 - - - - 0.970 0.872 - -
41. pcsk1nl ENSDARG00000076170 1232 2.668 0.850 - - - - 0.869 0.949 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
42. TUBA1A ENSDARG00000001889 25294 2.665 0.767 - - - - 0.924 0.974 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
43. dpysl3 ENSDARG00000002587 4381 2.664 0.786 - - - - 0.953 0.925 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
44. SEMA7A ENSDARG00000078707 465 2.661 0.858 - - - - 0.897 0.906 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
45. rap2ip rap2ip 681 2.66 0.869 - - - - 0.842 0.949 - -
46. TUBB8P7_1 TUBB8P7_1 2722 2.659 0.813 - - - - 0.906 0.940 - -
47. clstn3 ENSDARG00000073883 590 2.658 0.880 - - - - 0.899 0.879 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
48. fzd3a ENSDARG00000021664 1958 2.657 0.930 - - - - 0.820 0.907 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
49. gng3 ENSDARG00000009553 2530 2.656 0.912 - - - - 0.811 0.933 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
50. mllt11 ENSDARG00000071026 2518 2.656 0.808 - - - - 0.917 0.931 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
51. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.656 0.850 - - - - 0.889 0.917 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
52. ptpn5 ENSDARG00000074866 548 2.654 - - - 0.881 - 0.857 0.916 - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
53. slc1a2b ENSDARG00000102453 3136 2.653 0.800 - - - - 0.936 0.917 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
54. tmem35 ENSDARG00000052567 5685 2.652 0.805 - - - - 0.882 0.965 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
55. si:ch73-21g5.7 ENSDARG00000093156 9412 2.65 0.866 - - - - 0.807 0.977 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
56. CR847998.1 ENSDARG00000104784 518 2.65 0.840 - - - - 0.910 0.900 - -
57. slc12a5b ENSDARG00000078187 329 2.649 0.845 - - - - 0.850 0.954 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
58. nrarpb ENSDARG00000018958 6225 2.645 0.705 - - - - 0.958 0.982 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
59. CABZ01111990.1 CABZ01111990.1 4374 2.644 0.815 - - - - 0.874 0.955 - -
60. gfap ENSDARG00000025301 5584 2.641 0.784 - - - - 0.899 0.958 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
61. TUBB8P7 TUBB8P7 1353 2.64 0.837 - - 0.838 - 0.965 - - -
62. CDK5R1 CDK5R1 562 2.638 0.773 - - - - 0.944 0.921 - -
63. snap25a ENSDARG00000020609 4537 2.638 0.811 - - - - 0.915 0.912 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
64. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.638 0.850 - - - - 0.831 0.957 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
65. stmn1b ENSDARG00000033655 9491 2.634 0.883 - - - - 0.783 0.968 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
66. pax6a ENSDARG00000103379 3061 2.632 0.807 - - - - 0.938 0.887 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
67. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.63 0.920 - - - - 0.882 0.828 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
68. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 2.626 0.862 - - - - 0.846 0.918 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
69. snap25b ENSDARG00000058117 469 2.624 0.792 - - - - 0.922 0.910 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
70. neurog1 ENSDARG00000056130 3924 2.624 0.763 - - - - 0.880 0.981 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
71. VSTM2B VSTM2B 149 2.624 - - - 0.939 - 0.805 0.880 - -
72. gap43 ENSDARG00000099744 4114 2.62 0.773 - - - - 0.928 0.919 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
73. mir10d-1 mir10d-1 860 2.618 0.796 - - - - 0.913 0.909 - -
74. her2 ENSDARG00000038205 3219 2.618 0.857 - - - - 0.797 0.964 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
75. tmie ENSDARG00000069423 305 2.617 0.819 - - - - 0.835 0.963 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
76. kcnn1a ENSDARG00000091306 95 2.615 0.841 0.906 - - - - 0.868 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
77. stmn2b ENSDARG00000070537 1586 2.613 0.831 - - - - 0.965 0.817 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
78. slc32a1 ENSDARG00000059775 1092 2.603 0.795 - - - - 0.909 0.899 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
79. rbfox3 rbfox3 1443 2.602 0.744 - - - - 0.938 0.920 - -
80. tox ENSDARG00000032317 9126 2.596 0.828 - - - - 0.819 0.949 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
81. eno2 ENSDARG00000014287 2162 2.595 0.791 - - - - 0.823 0.981 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
82. map7d2a ENSDARG00000068480 513 2.589 0.851 - - - - 0.834 0.904 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
83. MAP1A MAP1A 847 2.589 0.812 - - - - 0.893 0.884 - -
84. si:dkey-169l5.3 si:dkey-169l5.3 239 2.589 0.742 0.906 - - - - 0.941 - -
85. plp1a ENSDARG00000103732 3544 2.587 0.811 - - - - 0.811 0.965 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
86. PPP2R5B ENSDARG00000054931 213 2.587 - 0.906 - - - 0.798 0.883 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
87. cspg5a ENSDARG00000069981 1699 2.584 0.824 - - - - 0.828 0.932 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
88. GRIN3A ENSDARG00000075802 27 2.584 - 0.906 - - - 0.835 0.843 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
89. necap1 ENSDARG00000020798 612 2.582 0.807 - - - - 0.838 0.937 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
90. slc8a2b ENSDARG00000100592 598 2.579 0.793 - - - - 0.839 0.947 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
91. EPB41L1 EPB41L1 1896 2.573 0.802 - - - - 0.869 0.902 - -
92. rtn1b ENSDARG00000021143 1682 2.572 0.829 - - - - 0.869 0.874 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
93. BX511121.1 ENSDARG00000029997 1774 2.568 0.804 - - - - 0.783 0.981 - -
94. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.567 0.741 - - - - 0.890 0.936 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
95. pcsk1 ENSDARG00000002600 404 2.567 0.807 - - - - 0.908 0.852 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
96. PPP1R9B PPP1R9B 855 2.567 0.852 - - - - 0.819 0.896 - -
97. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.566 0.781 - - - - 0.942 0.843 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
98. gad2 ENSDARG00000015537 724 2.564 0.847 - - - - 0.818 0.899 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
99. nbeaa ENSDARG00000070080 862 2.561 0.724 - - - - 0.914 0.923 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
100. rab3ab ENSDARG00000043835 1267 2.56 0.738 - - - - 0.871 0.951 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]

There are 2029 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA