Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vent

Gene Name Gene ID Reads Annotation
vent ENSDARG00000100483 74 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]










Genes with expression patterns similar to vent

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vent ENSDARG00000100483 74 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
2. ccdc14 ENSDARG00000098734 3 1.927 - - - - - 0.927 - 1.000 - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
3. URB1 ENSDARG00000060308 78 1.719 - - 0.792 - - 0.927 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
4. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.673 - - - 0.927 - - - 0.746 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
5. si:busm1-266f07.2 ENSDARG00000031745 19 1.519 - - - - - 0.783 - 0.736 - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
6. zgc:194252 ENSDARG00000057142 11 1 - - - - - - - 1.000 - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
7. BX511061.2 BX511061.2 30 1 - - - - - - - 1.000 -
8. iffo1a ENSDARG00000062976 5 1 - - - - - - - 1.000 - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
9. tuba7l ENSDARG00000104643 33 1 - - - - - - - 1.000 - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
10. IL17RA IL17RA 1 1 - - - - - - - 1.000 -
11. rdh14a ENSDARG00000039299 79 1 - - - - - 1.000 - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
12. si:ch211-187g4.1 ENSDARG00000094350 0 1 - - - - - - - 1.000 - si:ch211-187g4.1 [Source:ZFIN;Acc:ZDB-GENE-070912-161]
13. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - 1.000 - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
14. FRMD1_1 FRMD1_1 3 1 - - - - - - - 1.000 -
15. zgc:193682 zgc:193682 15 1 - - - - - - - 1.000 -
16. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 1 - - - - - - - 1.000 - zgc:172218 [Source:NCBI gene;Acc:793798]
17. si:ch211-198e13.3 5 1 - - - - - 1.000 - - - si:ch211-198e13.3, transcript variant X1
18. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - - 1.000 -
19. csf1rb ENSDARG00000053624 9 1 - - - - - - - 1.000 - colony stimulating factor 1 receptor, b [Source:ZFIN;Acc:ZDB-GENE-091118-1]
20. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - - - - - 1.000 - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
21. anpepb ENSDARG00000103878 8 1 - - - - - - - 1.000 - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
22. larsa ENSDARG00000090988 26 1 - - - - - - - 1.000 - leucyl-tRNA synthetase a [Source:ZFIN;Acc:ZDB-GENE-110411-16]
23. zgc:113355 zgc:113355 2 1 - - - - - - - 1.000 -
24. si:ch211-261b22.2 si:ch211-261b22.2 1 1 - - - - - - - 1.000 -
25. CABZ01034707.1 CABZ01034707.1 122 1 - - - - - 1.000 - - -
26. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - - - 1.000 -
27. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - - - - - - 1.000 - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
28. PEG3_39 PEG3_39 3 1 - - - - - - - 1.000 -
29. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - - - - - - - 1.000 - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
30. si:rp71-36a1.3 ENSDARG00000071662 2 1 - - - - - - - 1.000 - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
31. taf4b ENSDARG00000075732 3 1 - - - - - - - 1.000 - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
32. fgfr1bl ENSDARG00000075027, ENSDARG00000104015 2 1 - - - - - - - 1.000 - fibroblast growth factor receptor 1b, like [Source:ZFIN;Acc:ZDB-GENE-091204-406]
33. cabp1b ENSDARG00000033411 2 1 - - - - - - - 1.000 - calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
34. fank1 ENSDARG00000039657 9 1 - - - - - - - 1.000 - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
35. SLC4A10 SLC4A10 1 1 - - - - - - - 1.000 -
36. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - 1.000 - - -
37. pth1ra ENSDARG00000020957 0 1 - - - - - - - 1.000 - parathyroid hormone 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-991123-8]
38. U6_33 U6_33 0 1 - - - - - - - 1.000 -
39. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - 1.000 - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
40. top1 ENSDARG00000086775 8 1 - - - - - - - 1.000 - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
41. nphs2 ENSDARG00000042850 31 0.985 - - - - - - - 0.985 - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
42. EVA1B EVA1B 22 0.983 - - - - - 0.983 - - -
43. ROCK2_3 ROCK2_3 12 0.983 - - - - - 0.983 - - -
44. parvab ENSDARG00000035629 2 0.982 - - - - - - - - 0.982 parvin, alpha b [Source:ZFIN;Acc:ZDB-GENE-070424-60]
45. PRF1 PRF1 69 0.982 - - - - - - - - 0.982
46. rbm27 ENSDARG00000060521 185 0.968 - - - - - 0.968 - - - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
47. CU855890.3 CU855890.3 307 0.961 - - - - - 0.961 - - -
48. TMPRSS7 5 0.957 - - - - - 0.957 - - - transmembrane protease, serine 7
49. ctsl.1 ENSDARG00000003902 25 0.957 - - - - - 0.957 - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
50. SUN2 SUN2 86 0.957 - - - - - 0.957 - - -
51. USP43 USP43 14 0.952 - - - - - - - - 0.952
52. BX005329.3 ENSDARG00000094694 1 0.947 - - - 0.947 - - - - -
53. HTRA2_1 HTRA2_1 1 0.947 - - - 0.947 - - - - -
54. CR382383.3 CR382383.3 2 0.947 - - - 0.947 - - - - -
55. cx47.1 ENSDARG00000073896 1 0.947 - - - 0.947 - - - - - connexin 47.1 [Source:ZFIN;Acc:ZDB-GENE-040912-134]
56. si:dkey-18c8.3 si:dkey-18c8.3 2 0.947 - - - 0.947 - - - - -
57. tec ENSDARG00000098477 2 0.947 - - - 0.947 - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
58. si:busm1-71b9.3 11 0.947 - - - 0.947 - - - - - si:busm1-71b9.3, transcript variant X4
59. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 0.947 - - - 0.947 - - - - - si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
60. Metazoa_SRP_2 Metazoa_SRP_2 2 0.947 - - - 0.947 - - - - -
61. IQCK ENSDARG00000076831, ENSDARG00000112508 6 0.947 - - - 0.947 - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
62. zgc:158345 2 0.947 - - - 0.947 - - - - - zgc:158345
63. CABZ01006980.1 CABZ01006980.1 5 0.947 - - - 0.947 - - - - -
64. sb:cb846 sb:cb846 1 0.947 - - - 0.947 - - - - -
65. tha1 ENSDARG00000076225 183 0.943 - - - - - 0.943 - - - threonine aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-14]
66. zp2.6 ENSDARG00000091409 5 0.938 - - - 0.938 - - - - - zona pellucida glycoprotein 2, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-090306-2]
67. lpcat2 ENSDARG00000053010 137 0.937 - - - - - 0.937 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
68. arhgap15 ENSDARG00000062349 28 0.935 - - - - - 0.935 - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
69. CMA1_1 CMA1_1 7 0.931 - - - 0.931 - - - - -
70. chmp6b ENSDARG00000102024 37 0.929 - - - - - 0.929 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
71. tbl2 ENSDARG00000043357 125 0.927 - - - - - 0.927 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
72. ftr58 ENSDARG00000071238 10 0.927 - - - - - 0.927 - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
73. cldn10l2 ENSDARG00000105042 11 0.927 - - - - - 0.927 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
74. snR50 snR50 1 0.927 - - - - - 0.927 - - -
75. olfcg2 ENSDARG00000101083 8 0.927 - - - - - 0.927 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
76. BX284672.1 BX284672.1 11 0.927 - - - - - 0.927 - - -
77. gp1bb ENSDARG00000074441 116 0.927 - - - - - 0.927 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
78. POGK POGK 1 0.927 - - - - - 0.927 - - -
79. uts1 ENSDARG00000014927 35 0.927 - - - - - 0.927 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
80. BX323793.3 BX323793.3 7 0.927 - - - - - 0.927 - - -
81. CT573356.3 CT573356.3 2 0.927 - - - - - 0.927 - - -
82. si:dkey-112e17.1 ENSDARG00000093201 1 0.927 - - - - - 0.927 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
83. NMI 3 0.927 - - - - - 0.927 - - - N-myc (and STAT) interactor
84. BX004880.2 BX004880.2 83 0.927 - - - - - 0.927 - - -
85. si:ch211-117l17.4 ENSDARG00000103534 24 0.927 - - - - - 0.927 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
86. kcnh3 ENSDARG00000069560 4 0.927 - - - - - 0.927 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
87. NAT14 ENSDARG00000115349 21 0.927 - - - - - 0.927 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
88. wdyhv1 ENSDARG00000070403 42 0.927 - - - - - 0.927 - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
89. BICD1 BICD1 9 0.927 - - - - - 0.927 - - -
90. il12bb ENSDARG00000054542 6 0.927 - - - - - 0.927 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
91. syt15 ENSDARG00000079926 8 0.927 - - - - - 0.927 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
92. GMEB2 ENSDARG00000093240 6 0.927 - - - - - 0.927 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
93. HMGXB3 ENSDARG00000077823 2 0.927 - - - - - 0.927 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
94. ripply2 ENSDARG00000070535 18 0.927 - - - - - 0.927 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
95. TSPAN1 ENSDARG00000052027 4 0.927 - - - - - 0.927 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
96. ZC2HC1C ENSDARG00000070526 14 0.927 - - - - - 0.927 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
97. itga2.1 ENSDARG00000069390 6 0.927 - - - - - 0.927 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
98. CMA1_8 CMA1_8 10 0.927 - - - - - 0.927 - - -
99. m17 ENSDARG00000035435 28 0.927 - - - - - 0.927 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
100. irak1 ENSDARG00000025949 19 0.927 - - - - - 0.927 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]

There are 413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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