Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vent

Gene Name Gene ID Reads Annotation
vent ENSDARG00000100483 74 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]










Genes with expression patterns similar to vent

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vent ENSDARG00000100483 74 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
2. ccdc14 ENSDARG00000098734 3 1.927 - - - - - 0.927 - 1.000 - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
3. URB1 ENSDARG00000060308 78 1.719 - - 0.792 - - 0.927 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
4. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.673 - - - 0.927 - - - 0.746 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
5. si:busm1-266f07.2 ENSDARG00000031745 19 1.519 - - - - - 0.783 - 0.736 - si:busm1-266f07.2 [Source:ZFIN;Acc:ZDB-GENE-030616-436]
6. zgc:194252 ENSDARG00000057142 11 1 - - - - - - - 1.000 - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
7. si:ch211-187g4.1 ENSDARG00000094350 0 1 - - - - - - - 1.000 - si:ch211-187g4.1 [Source:ZFIN;Acc:ZDB-GENE-070912-161]
8. iffo1a ENSDARG00000062976 5 1 - - - - - - - 1.000 - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
9. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - - 1.000 -
10. zgc:193682 zgc:193682 15 1 - - - - - - - 1.000 -
11. FRMD1_1 FRMD1_1 3 1 - - - - - - - 1.000 -
12. csf1rb ENSDARG00000053624 9 1 - - - - - - - 1.000 - colony stimulating factor 1 receptor, b [Source:ZFIN;Acc:ZDB-GENE-091118-1]
13. CABZ01034707.1 CABZ01034707.1 122 1 - - - - - 1.000 - - -
14. SLC4A10 SLC4A10 1 1 - - - - - - - 1.000 -
15. fank1 ENSDARG00000039657 9 1 - - - - - - - 1.000 - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
16. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - - - - - - - 1.000 - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
17. top1 ENSDARG00000086775 8 1 - - - - - - - 1.000 - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
18. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - 1.000 - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
19. pth1ra ENSDARG00000020957 0 1 - - - - - - - 1.000 - parathyroid hormone 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-991123-8]
20. BX511061.2 BX511061.2 30 1 - - - - - - - 1.000 -
21. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - 1.000 - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
22. rdh14a ENSDARG00000039299 79 1 - - - - - 1.000 - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
23. IL17RA IL17RA 1 1 - - - - - - - 1.000 -
24. tuba7l ENSDARG00000104643 33 1 - - - - - - - 1.000 - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
25. si:ch211-198e13.3 5 1 - - - - - 1.000 - - - si:ch211-198e13.3, transcript variant X1
26. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 1 - - - - - - - 1.000 - zgc:172218 [Source:NCBI gene;Acc:793798]
27. si:ch211-261b22.2 si:ch211-261b22.2 1 1 - - - - - - - 1.000 -
28. zgc:113355 zgc:113355 2 1 - - - - - - - 1.000 -
29. larsa ENSDARG00000090988 26 1 - - - - - - - 1.000 - leucyl-tRNA synthetase a [Source:ZFIN;Acc:ZDB-GENE-110411-16]
30. anpepb ENSDARG00000103878 8 1 - - - - - - - 1.000 - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
31. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - - - - - 1.000 - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
32. PEG3_39 PEG3_39 3 1 - - - - - - - 1.000 -
33. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - - - - - - 1.000 - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
34. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - - - 1.000 -
35. cabp1b ENSDARG00000033411 2 1 - - - - - - - 1.000 - calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
36. fgfr1bl ENSDARG00000075027, ENSDARG00000104015 2 1 - - - - - - - 1.000 - fibroblast growth factor receptor 1b, like [Source:ZFIN;Acc:ZDB-GENE-091204-406]
37. taf4b ENSDARG00000075732 3 1 - - - - - - - 1.000 - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
38. si:rp71-36a1.3 ENSDARG00000071662 2 1 - - - - - - - 1.000 - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
39. U6_33 U6_33 0 1 - - - - - - - 1.000 -
40. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - 1.000 - - -
41. nphs2 ENSDARG00000042850 31 0.985 - - - - - - - 0.985 - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
42. EVA1B EVA1B 22 0.983 - - - - - 0.983 - - -
43. ROCK2_3 ROCK2_3 12 0.983 - - - - - 0.983 - - -
44. parvab ENSDARG00000035629 2 0.982 - - - - - - - - 0.982 parvin, alpha b [Source:ZFIN;Acc:ZDB-GENE-070424-60]
45. PRF1 PRF1 69 0.982 - - - - - - - - 0.982
46. rbm27 ENSDARG00000060521 185 0.968 - - - - - 0.968 - - - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
47. CU855890.3 CU855890.3 307 0.961 - - - - - 0.961 - - -
48. TMPRSS7 5 0.957 - - - - - 0.957 - - - transmembrane protease, serine 7
49. SUN2 SUN2 86 0.957 - - - - - 0.957 - - -
50. ctsl.1 ENSDARG00000003902 25 0.957 - - - - - 0.957 - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
51. USP43 USP43 14 0.952 - - - - - - - - 0.952
52. BX005329.3 ENSDARG00000094694 1 0.947 - - - 0.947 - - - - -
53. si:dkey-18c8.3 si:dkey-18c8.3 2 0.947 - - - 0.947 - - - - -
54. si:ch73-256j6.4 ENSDARG00000078519, ENSDARG00000093574 3 0.947 - - - 0.947 - - - - - si:ch73-256j6.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3779]
55. sb:cb846 sb:cb846 1 0.947 - - - 0.947 - - - - -
56. CABZ01006980.1 CABZ01006980.1 5 0.947 - - - 0.947 - - - - -
57. HTRA2_1 HTRA2_1 1 0.947 - - - 0.947 - - - - -
58. cx47.1 ENSDARG00000073896 1 0.947 - - - 0.947 - - - - - connexin 47.1 [Source:ZFIN;Acc:ZDB-GENE-040912-134]
59. CR382383.3 CR382383.3 2 0.947 - - - 0.947 - - - - -
60. tec ENSDARG00000098477 2 0.947 - - - 0.947 - - - - - tec protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7499]
61. IQCK ENSDARG00000076831, ENSDARG00000112508 6 0.947 - - - 0.947 - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
62. Metazoa_SRP_2 Metazoa_SRP_2 2 0.947 - - - 0.947 - - - - -
63. si:busm1-71b9.3 11 0.947 - - - 0.947 - - - - - si:busm1-71b9.3, transcript variant X4
64. zgc:158345 2 0.947 - - - 0.947 - - - - - zgc:158345
65. tha1 ENSDARG00000076225 183 0.943 - - - - - 0.943 - - - threonine aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-14]
66. zp2.6 ENSDARG00000091409 5 0.938 - - - 0.938 - - - - - zona pellucida glycoprotein 2, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-090306-2]
67. lpcat2 ENSDARG00000053010 137 0.937 - - - - - 0.937 - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
68. arhgap15 ENSDARG00000062349 28 0.935 - - - - - 0.935 - - - Rho GTPase activating protein 15 [Source:ZFIN;Acc:ZDB-GENE-070912-314]
69. CMA1_1 CMA1_1 7 0.931 - - - 0.931 - - - - -
70. chmp6b ENSDARG00000102024 37 0.929 - - - - - 0.929 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
71. BX323793.3 BX323793.3 7 0.927 - - - - - 0.927 - - -
72. POGK POGK 1 0.927 - - - - - 0.927 - - -
73. gp1bb ENSDARG00000074441 116 0.927 - - - - - 0.927 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
74. BX284672.1 BX284672.1 11 0.927 - - - - - 0.927 - - -
75. BICD1 BICD1 9 0.927 - - - - - 0.927 - - -
76. wdyhv1 ENSDARG00000070403 42 0.927 - - - - - 0.927 - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
77. NAT14 ENSDARG00000115349 21 0.927 - - - - - 0.927 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
78. NMI 3 0.927 - - - - - 0.927 - - - N-myc (and STAT) interactor
79. CELA1_2 CELA1_2 2 0.927 - - - - - 0.927 - - -
80. CMA1_8 CMA1_8 10 0.927 - - - - - 0.927 - - -
81. m17 ENSDARG00000035435 28 0.927 - - - - - 0.927 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
82. ripply2 ENSDARG00000070535 18 0.927 - - - - - 0.927 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
83. HMGXB3 ENSDARG00000077823 2 0.927 - - - - - 0.927 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
84. slc25a19 ENSDARG00000100385 2 0.927 - - - - - 0.927 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
85. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 0.927 - - - - - 0.927 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
86. v2rh11 ENSDARG00000115088 1 0.927 - - - - - 0.927 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
87. themis ENSDARG00000010619 5 0.927 - - - - - 0.927 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
88. FAM196A 82 0.927 - - - - - 0.927 - - - family with sequence similarity 196 member A
89. NOX4 3 0.927 - - - - - 0.927 - - - NADPH oxidase 4
90. pdk3a ENSDARG00000014527 15 0.927 - - - - - 0.927 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
91. si:ch211-125e6.12 ENSDARG00000092090 3 0.927 - - - - - 0.927 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
92. il17c ENSDARG00000057180, ENSDARG00000109701 3 0.927 - - - - - 0.927 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
93. si:ch211-219a15.3 ENSDARG00000087659 12 0.927 - - - - - 0.927 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
94. TGFBR2 TGFBR2 2 0.927 - - - - - 0.927 - - -
95. TESPA1 ENSDARG00000053311 29 0.927 - - - - - 0.927 - - - thymocyte expressed, positive selection associated 1 [Source:ZFIN;Acc:ZDB-GENE-120727-10]
96. C12H16orf93 C12H16orf93 1 0.927 - - - - - 0.927 - - -
97. vtg3 ENSDARG00000016448 8 0.927 - - - - - 0.927 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
98. CABZ01060813.1 CABZ01060813.1 12 0.927 - - - - - 0.927 - - -
99. pigf ENSDARG00000032780 7 0.927 - - - - - 0.927 - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
100. rhobtb2b ENSDARG00000089340 4 0.927 - - - - - 0.927 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]

There are 413 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA