Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vcana

Gene Name Gene ID Reads Annotation
vcana ENSDARG00000103515 611 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]










Genes with expression patterns similar to vcana

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vcana ENSDARG00000103515 611 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
2. EMILIN3 1347 3.138 - - 0.796 - 0.840 0.793 - 0.709 - elastin microfibril interfacer 3
3. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 2.561 - - - - 0.735 0.861 - - 0.965 distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
4. CARD11 ENSDARG00000052741 249 2.56 - - - 0.751 - - 0.831 - 0.978 caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
5. cx44.2 ENSDARG00000034207, ENSDARG00000113651 431 2.55 - 0.816 - - 0.791 - 0.943 - - connexin 44.2 [Source:ZFIN;Acc:ZDB-GENE-010619-1]
6. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 2.501 - - 0.726 - - - 0.832 - 0.943 hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
7. coro2a ENSDARG00000005210 1479 2.494 - 0.849 - - - - 0.719 - 0.926 coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
8. prc1a ENSDARG00000100918 1746 2.447 - 0.737 - 0.750 - - - - 0.960 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
9. and3 ENSDARG00000056873 22650 2.409 0.750 - - - - 0.886 0.773 - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
10. ogn 5002 2.404 - 0.708 - - 0.755 - - - 0.941 osteoglycin
11. derl2 ENSDARG00000042401 863 2.322 - 0.876 - - - 0.722 - 0.724 - derlin 2 [Source:ZFIN;Acc:ZDB-GENE-050522-90]
12. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 2.275 - 0.808 - - - - 0.746 0.721 - si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
13. itga8 ENSDARG00000078717 215 2.184 0.773 - - - - 0.710 - 0.701 - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
14. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 1.903 - - - - - 0.988 0.915 - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
15. si:ch211-135f11.1 166 1.877 - - - - - - 0.906 - 0.971 si:ch211-135f11.1, transcript variant X3
16. zgc:136439 ENSDARG00000009267 720 1.863 - - - - - - 0.894 - 0.969 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
17. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1.835 - - - - - 0.970 0.865 - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
18. PDZD8 ENSDARG00000088699 844 1.834 0.872 - - - - - - - 0.962 PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
19. fgf8a ENSDARG00000003399 580 1.824 - - - - - - 0.856 - 0.968 fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
20. slc15a4 ENSDARG00000102612 1096 1.794 - 0.880 - - - 0.914 - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
21. TMC6 TMC6 773 1.781 - - - - - - 0.815 - 0.966
22. bty bty 752 1.775 - - - - - - 0.854 - 0.921
23. mmp9 ENSDARG00000042816 298 1.77 - - - - - - 0.802 - 0.968 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
24. fpgt ENSDARG00000042139 155 1.759 - - - - - - 0.905 0.854 - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
25. fam20c fam20c 603 1.747 - - - - - 0.793 - - 0.954
26. msxa msxa 263 1.744 0.773 - - - - - - - 0.971
27. ssh2b ENSDARG00000098955 614 1.739 - - - - - - 0.786 - 0.953 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
28. CT573389.2 CT573389.2 1183 1.732 - - - - - 0.781 - - 0.951
29. tfcp2 ENSDARG00000060306 1024 1.726 - 0.800 - - - - 0.926 - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
30. pex7 ENSDARG00000042553 409 1.726 - - - - - - 0.759 - 0.967 peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
31. slc12a9 ENSDARG00000060366 293 1.725 - - - 0.758 - - - - 0.967 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
32. arhgap24 ENSDARG00000100973 1105 1.721 0.752 - - - - - - - 0.969 Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
33. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.72 - - - - - - 0.769 - 0.951 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
34. frem1a ENSDARG00000069473 1847 1.72 - - - - - 0.781 - - 0.939 Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
35. pitx2 ENSDARG00000036194 2279 1.717 - 0.941 - - - - 0.776 - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
36. atg4b ENSDARG00000052104 758 1.71 - - - - - - 0.756 - 0.954 autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
37. mxra8a ENSDARG00000062222 530 1.703 - - - 0.891 - - - 0.812 - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
38. cxcr4a ENSDARG00000057633 1829 1.701 - 0.765 - - - - - - 0.936 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
39. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 1.701 - - - - - 0.726 - - 0.975 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
40. CPAMD8 ENSDARG00000056530 3481 1.7 - - - - - 0.769 - - 0.931 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
41. cnstb ENSDARG00000042759 105 1.7 - - - - - 0.851 0.849 - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
42. slc27a2a ENSDARG00000036237 166 1.698 - 0.790 - - - 0.908 - - - solute carrier family 27 (fatty acid transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-050706-104]
43. cd2ap ENSDARG00000015224 2830 1.687 - - - - - - 0.793 - 0.894 CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
44. MPPED1 ENSDARG00000088181 117 1.683 0.773 - - - - - 0.910 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
45. trim35-28 ENSDARG00000021021 1380 1.683 - - 0.743 - - - - - 0.940 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
46. MON1B_1 MON1B_1 697 1.681 - - - - - - 0.721 - 0.960
47. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.678 - - - 0.767 - - 0.911 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
48. mia2 ENSDARG00000099973 139 1.677 - - - - - 0.818 0.859 - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
49. trim25l ENSDARG00000020863 292 1.674 - 0.711 - - - - 0.963 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
50. LRRC8E LRRC8E 495 1.67 - - - - - - 0.934 0.736 -
51. fam83b ENSDARG00000078309 318 1.664 - - - 0.747 - - 0.917 - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
52. itih5 ENSDARG00000045517 374 1.66 - - - - - 0.809 0.851 - - inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
53. ca8 ENSDARG00000039098 401 1.658 - - 0.759 - - - 0.899 - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
54. sar1b ENSDARG00000103403 1699 1.654 - - - - - - 0.701 - 0.953 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
55. cyp26c1 ENSDARG00000056029 1426 1.651 - - - - - - 0.869 - 0.782 cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
56. tmem258 ENSDARG00000078785 9578 1.647 - - - - - - 0.792 - 0.855 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
57. gorasp1 gorasp1 3075 1.645 - 0.701 - - - - - - 0.944
58. MPRIP_1 ENSDARG00000105209 898 1.641 - - - - - 0.702 - - 0.939 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
59. zgc:92061 zgc:92061 21304 1.638 - - - - - 0.913 0.725 - -
60. si:dkey-9i23.6 ENSDARG00000094678 58 1.636 0.773 0.863 - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
61. EMILIN2 EMILIN2 429 1.631 - - - - - 0.744 0.887 - -
62. ctgfb ENSDARG00000104292 69 1.631 - - - - - 0.721 0.910 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
63. htra1b ENSDARG00000014907 146 1.628 0.773 - - - - 0.855 - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
64. taok3a ENSDARG00000060751 254 1.625 - - - 0.774 - 0.851 - - - TAO kinase 3a [Source:ZFIN;Acc:ZDB-GENE-100921-50]
65. CABZ01111926.1 CABZ01111926.1 249 1.625 - - - - - 0.854 - 0.771 -
66. paqr7a ENSDARG00000100462 15 1.624 0.773 - - - - 0.851 - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
67. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.622 0.729 - - - - - 0.893 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
68. dlx3b ENSDARG00000014626 3647 1.621 - 0.759 - - - - - - 0.862 distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
69. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.621 - - - - - 0.761 0.860 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
70. lamb1a ENSDARG00000101209 5396 1.618 - 0.818 - - - - 0.800 - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
71. SLC44A2 ENSDARG00000037059 88 1.617 - - - - - - 0.885 0.732 - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
72. cdc123 ENSDARG00000075025 418 1.616 - 0.774 - - - 0.842 - - - cell division cycle 123 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1680]
73. entpd2a.2 ENSDARG00000033953 389 1.615 - 0.746 - - - - 0.869 - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
74. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 1.614 - 0.808 - - - 0.806 - - - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
75. abhd4 ENSDARG00000102887 748 1.61 - - - - - - 0.870 0.740 - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
76. CABZ01024770.1 CABZ01024770.1 150 1.606 - 0.729 - - - - 0.877 - -
77. vcanb ENSDARG00000009401 3611 1.605 - - - - - 0.723 0.882 - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
78. lig4 ENSDARG00000060620 369 1.604 - - - - - 0.775 0.829 - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
79. rpe65b ENSDARG00000094752, ENSDARG00000113621 463 1.603 - 0.853 - - - - 0.750 - - retinal pigment epithelium-specific protein 65b [Source:ZFIN;Acc:ZDB-GENE-050410-16]
80. slc38a6 ENSDARG00000054312 112 1.596 - - - - - 0.781 0.815 - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
81. and1 ENSDARG00000088514 37603 1.595 - - - - - 0.831 0.764 - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
82. CABZ01059627.1 ENSDARG00000078394 101 1.588 - - - - - 0.722 0.866 - -
83. gstm3 gstm3 1164 1.576 - - - - - 0.762 0.814 - -
84. chek2 ENSDARG00000025820, ENSDARG00000115597 77 1.574 - - - - - 0.745 0.829 - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
85. si:dkey-177p2.18 ENSDARG00000091633 91 1.566 - - - - - 0.753 0.813 - - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
86. itsn2b ENSDARG00000054973, ENSDARG00000110296 1255 1.564 - - - - - 0.705 0.859 - - intersectin 2b [Source:ZFIN;Acc:ZDB-GENE-050309-102]
87. kazald2 ENSDARG00000078518 3062 1.562 - 0.746 - - 0.816 - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
88. si:dkey-12l12.1 ENSDARG00000094422 168 1.558 - - - 0.782 - - 0.776 - - si:dkey-12l12.1 [Source:ZFIN;Acc:ZDB-GENE-091204-232]
89. SP6 ENSDARG00000099880, ENSDARG00000110548 665 1.557 - 0.854 - - - 0.703 - - - Sp6 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-1824]
90. si:ch211-127i16.1 si:ch211-127i16.1 228 1.556 - - - - - - 0.814 0.742 -
91. mogs ENSDARG00000060252 1151 1.555 - 0.785 - - - - 0.770 - - mannosyl-oligosaccharide glucosidase [Source:ZFIN;Acc:ZDB-GENE-070112-412]
92. hoxa13a ENSDARG00000100312 543 1.548 - - 0.702 - - - 0.846 - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
93. MIA ENSDARG00000052437, ENSDARG00000116215 1220 1.544 - - - - - 0.829 0.715 - - MIA SH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-081022-66]
94. zgc:158403 ENSDARG00000062757 710 1.538 - 0.752 - - - 0.786 - - - zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]
95. si:ch211-171h4.7 ENSDARG00000088408 168 1.538 0.773 - - - - 0.765 - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
96. sp5l ENSDARG00000115868 361 1.535 - - - - - 0.812 - 0.723 - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
97. CABZ01068153.1 CABZ01068153.1 211 1.535 0.718 - - - - 0.817 - - -
98. adamts1 ENSDARG00000103519 539 1.531 - 0.812 - - - - 0.719 - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
99. sp9 ENSDARG00000099374 2266 1.53 - 0.819 - - - 0.711 - - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
100. hoxa13b ENSDARG00000036254 404 1.53 - - 0.717 0.813 - - - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]

There are 1718 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA