Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vax1

Gene Name Gene ID Reads Annotation
vax1 ENSDARG00000021916, ENSDARG00000114230 152 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]










Genes with expression patterns similar to vax1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vax1 ENSDARG00000021916, ENSDARG00000114230 152 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
2. vax2 ENSDARG00000058702 175 3.614 - - 0.941 0.877 - - - 0.929 0.867 ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
3. zgc:171531 zgc:171531 77 3.439 - - 0.749 0.942 - - - 0.870 0.878
4. six3b ENSDARG00000054879 2416 3.036 - - 0.728 0.746 - - - 0.787 0.775 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
5. nkx2.1b nkx2.1b 125 2.618 - - 0.867 0.904 - - - - 0.847
6. nkx2.1a nkx2.1a 156 2.567 - - 0.824 0.879 - - - - 0.864
7. npvf ENSDARG00000036227 23 2.557 - - 0.828 0.895 - - - 0.834 - neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
8. six3a ENSDARG00000058008, ENSDARG00000114971 586 2.529 - - 0.823 0.745 0.961 - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
9. slc1a3b ENSDARG00000043148 431 2.5 - - 0.895 0.877 - - - - 0.728 solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
10. six6b ENSDARG00000031316 132 2.129 - - - 0.710 - - - 0.713 0.706 SIX homeobox 6b [Source:ZFIN;Acc:ZDB-GENE-050522-308]
11. lsm14b ENSDARG00000025386 23 2 - 1.000 - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
12. rictora ENSDARG00000100867 20 2 - 1.000 - - - - 1.000 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
13. lctlb ENSDARG00000016337 35 1.921 - - - - - - 1.000 0.921 - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
14. ODF3L2 40 1.912 - 1.000 - - - - 0.912 - - outer dense fiber of sperm tails 3-like 2
15. im:7136021 ENSDARG00000054128 79 1.907 - 1.000 - - - - 0.907 - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
16. cx50.5 cx50.5 15 1.892 - 1.000 - - - - - 0.892 -
17. med8 ENSDARG00000114425 7 1.834 - - - - - - 1.000 0.834 - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
18. syne3 ENSDARG00000023237 23 1.818 - - - - - - 1.000 - 0.818 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
19. zgc:194659 ENSDARG00000079347 17 1.785 - - 0.785 - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
20. GSC2 GSC2 3 1.772 - - - - - - 1.000 - 0.772
21. arl13a ENSDARG00000052575 25 1.753 - - - - - - 0.912 0.841 - ADP-ribosylation factor-like 13A [Source:ZFIN;Acc:ZDB-GENE-040426-1790]
22. si:dkey-21o19.2 ENSDARG00000088900 52 1.747 - - - - - - - 0.909 0.838 si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
23. SLC38A8 SLC38A8 17 1.741 - 0.802 - - - - - 0.939 -
24. si:ch211-79g12.1 ENSDARG00000116692 2 1.737 - 1.000 0.737 - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
25. st6galnac1.2 ENSDARG00000043816 51 1.737 - - 0.737 - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
26. pax6l pax6l 54 1.733 - - - - - - - 0.971 0.762
27. zgc:163077 ENSDARG00000101593 60 1.727 - 1.000 - - - - 0.727 - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
28. bgna ENSDARG00000017884 9 1.72 - 1.000 - - - - 0.720 - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
29. si:ch211-161n3.3 ENSDARG00000092989 9 1.72 - 1.000 0.720 - - - - - - si:ch211-161n3.3 [Source:ZFIN;Acc:ZDB-GENE-041210-102]
30. ahr1b ENSDARG00000023537 44 1.71 - - - - - - - 0.827 0.883 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
31. AL929453.1 ENSDARG00000115950 31 1.706 - 1.000 0.706 - - - - - -
32. si:dkey-25i10.5 si:dkey-25i10.5 18 1.703 - 1.000 - 0.703 - - - - -
33. tagln ENSDARG00000045408 48 1.685 - - 0.785 0.900 - - - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
34. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.669 - - - - - - - 0.818 0.851 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
35. fezf1 ENSDARG00000010270 379 1.651 - - 0.940 0.711 - - - - - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
36. ndrg1b ENSDARG00000010420 116 1.648 - - - - - - - 0.800 0.848 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
37. SERINC4 ENSDARG00000044815 45 1.641 - - - - - - - 0.858 0.783 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
38. rars2 ENSDARG00000032277 54 1.62 - - - - - - 0.907 0.713 - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
39. si:dkey-287f10.2 si:dkey-287f10.2 3 1.619 - - 0.785 - - - - 0.834 -
40. dlx1a ENSDARG00000013125 142 1.607 - - 0.858 0.749 - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
41. lhx8a ENSDARG00000002330 25 1.575 - - 0.755 0.820 - - - - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
42. mfng ENSDARG00000042925 104 1.555 - 0.837 - - - - 0.718 - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
43. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.545 - - - - - - - 0.717 0.828 cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
44. rorb ENSDARG00000033498 544 1.538 - - - - - - - 0.722 0.816 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
45. irx6a ENSDARG00000034420 29 1.518 - - - - - - - 0.780 0.738 iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
46. mamdc2b ENSDARG00000073695 26 1.504 - - - - - - - 0.795 0.709 MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
47. rx1 ENSDARG00000071684 247 1.5 - - - - - - - 0.751 0.749 retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
48. cryba1b ENSDARG00000053875 3256 1.496 - - - - 0.776 - - 0.720 - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
49. hes2.2 ENSDARG00000068168 197 1.493 - - - - - - - 0.760 0.733 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
50. dnah5 ENSDARG00000087373 168 1.486 - 0.731 - - - - 0.755 - - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
51. ptf1a ENSDARG00000014479 349 1.482 - - - - - - - 0.758 0.724 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
52. nkx2.2b ENSDARG00000101549 266 1.482 - - - 0.754 - - - 0.728 - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
53. si:ch211-10p21.1 si:ch211-10p21.1 6 1.48 - - 0.720 - - - - 0.760 -
54. cldn11a ENSDARG00000020031 284 1.48 - - 0.728 0.752 - - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
55. pmelb ENSDARG00000033760 206 1.468 - - - - - - - 0.766 0.702 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
56. otpb ENSDARG00000058379 1143 1.449 - - - 0.733 - - - - 0.716 orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
57. PCBP4 ENSDARG00000024276 3194 1.437 - - - - 0.733 - - - 0.704 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
58. MLLT4 MLLT4 67 1.422 - - - - - - - 0.713 0.709
59. mthfsd ENSDARG00000062042 34 1 - - - - - - 1.000 - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
60. SLC4A5 9 1 - - - - - - 1.000 - - solute carrier family 4 (sodium bicarbonate cotransporter), member 5, transcript variant X7
61. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - 1.000 - -
62. spo11 ENSDARG00000013837 7 1 - 1.000 - - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
63. SLC7A8 SLC7A8 25 1 - - - - - - 1.000 - -
64. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - - 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
65. ENSDARG00000029117 ENSDARG00000029117 80 1 - - - - - - 1.000 - -
66. QSOX2 ENSDARG00000077174 26 1 - 1.000 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
67. sinup ENSDARG00000017163 5 1 - - - - - - 1.000 - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
68. ms4a17a.4 ENSDARG00000014024 36 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
69. TRPC4 TRPC4 18 1 - - - - - - 1.000 - -
70. F13A1 F13A1 1 1 - 1.000 - - - - - - -
71. zp3a.1 ENSDARG00000042129 18 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
72. si:ch211-226h7.8 ENSDARG00000095409 0 1 - - - - - - 1.000 - - si:ch211-226h7.8 [Source:ZFIN;Acc:ZDB-GENE-130531-7]
73. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
74. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
75. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
76. si:ch211-223f7.1 si:ch211-223f7.1 38 1 - 1.000 - - - - - - -
77. zgc:152968 ENSDARG00000037002 6 1 - - - - - - 1.000 - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
78. slc7a9 ENSDARG00000005894 29 1 - - - - - - 1.000 - - solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 [Source:ZFIN;Acc:ZDB-GENE-080116-2]
79. si:dkey-11o18.5 ENSDARG00000087633 3 1 - - - - - - 1.000 - - si:dkey-11o18.5 [Source:ZFIN;Acc:ZDB-GENE-091204-110]
80. rapgef5b ENSDARG00000074307 112 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
81. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
82. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
83. stx17 ENSDARG00000006869 24 1 - - - - - - 1.000 - - syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]
84. glipr1b ENSDARG00000030078 73 1 - - - - - - 1.000 - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
85. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - 1.000 - - - - - - -
86. zte25 zte25 29 1 - - - - - - 1.000 - -
87. cabp1a ENSDARG00000019990 110 1 - 1.000 - - - - - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
88. USP53 USP53 5 1 - 1.000 - - - - - - -
89. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - 1.000 - -
90. si:dkey-276l13.3 si:dkey-276l13.3 8 1 - - - - - - 1.000 - -
91. CABZ01081674.1 CABZ01081674.1 15 1 - 1.000 - - - - - - -
92. Telomerase-vert Telomerase-vert 8 1 - - - - - - 1.000 - -
93. zgc:173577 ENSDARG00000098923 71 1 - - - - - - 1.000 - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
94. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - 1.000 - - - - - - -
95. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - 1.000 - - - - - - -
96. cul4a ENSDARG00000096578 14 1 - - - - - - 1.000 - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
97. BX682552.2_1 BX682552.2_1 37 1 - 1.000 - - - - - - -
98. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - - - 1.000 - -
99. ppfia2 ENSDARG00000013000 45 1 - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
100. SIRT4 ENSDARG00000010415 118 1 - - - - - - 1.000 - - sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]

There are 1381 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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