Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp6nl

Gene Name Gene ID Reads Annotation
usp6nl ENSDARG00000022187, ENSDARG00000109772 432 USP6 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041210-192]










Genes with expression patterns similar to usp6nl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp6nl ENSDARG00000022187, ENSDARG00000109772 432 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 USP6 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041210-192]
2. WDR53 ENSDARG00000079659 485 1.729 - 0.789 - 0.940 - - - - - WD repeat domain 53 [Source:ZFIN;Acc:ZDB-GENE-131121-294]
3. kmt2ba ENSDARG00000062962 1572 1.71 - 0.911 - - - - 0.799 - - lysine (K)-specific methyltransferase 2Ba [Source:ZFIN;Acc:ZDB-GENE-060503-376]
4. crym ENSDARG00000062817 171 1.703 - 0.906 - - - - 0.797 - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
5. triobp triobp 455 1.616 - 0.829 - - - - 0.787 - -
6. mtrr ENSDARG00000045398 325 1.613 - 0.912 - 0.701 - - - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:ZFIN;Acc:ZDB-GENE-101115-3]
7. kirrel3l ENSDARG00000104665 499 1.601 - 0.830 - - - - 0.771 - - kirre like nephrin family adhesion molecule 3, like [Source:ZFIN;Acc:ZDB-GENE-070831-1]
8. ubp1 ENSDARG00000018000 1047 1.591 - - - 0.837 - - 0.754 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
9. GPN1 ENSDARG00000043928 566 1.578 - - - 0.788 - - 0.790 - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
10. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.577 - - - 0.753 - - 0.824 - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
11. ndufaf6 ENSDARG00000053652 351 1.565 - 0.828 - - - - 0.737 - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:ZFIN;Acc:ZDB-GENE-100112-1]
12. zgc:73324 zgc:73324 989 1.56 - 0.779 - - - - 0.781 - -
13. TPC3 TPC3 416 1.547 - 0.721 - - - - 0.826 - -
14. si:ch211-238e22.1 si:ch211-238e22.1 1032 1.532 - - - - - 0.741 0.791 - -
15. mrpl44 ENSDARG00000094277 1778 1.53 - - - 0.775 - - 0.755 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
16. rabl6 rabl6 489 1.528 - 0.755 - - - - 0.773 - -
17. znf131 ENSDARG00000068400, ENSDARG00000110506 920 1.52 - 0.818 - - - - 0.702 - - zinc finger protein 131 [Source:ZFIN;Acc:ZDB-GENE-040426-1563]
18. srd5a1 ENSDARG00000020509 242 1.516 - - - - - 0.751 0.765 - - steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:ZFIN;Acc:ZDB-GENE-060929-938]
19. slc5a3b ENSDARG00000077812 153 1.51 - - - 0.790 - - 0.720 - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-43]
20. si:dkey-262g12.4 si:dkey-262g12.4 144 1.509 - - - - - 0.733 0.776 - -
21. lig3 ENSDARG00000052553 2665 1.501 - 0.784 - - - - 0.717 - - ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
22. synj2bp ENSDARG00000028321 1143 1.498 - 0.794 - - - - 0.704 - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
23. DHX29 ENSDARG00000040326 431 1.495 - - - - - 0.794 0.701 - - DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:ZFIN;Acc:ZDB-GENE-130530-606]
24. prkrira 971 1.488 - - - 0.760 - - 0.728 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
25. RNASEH2C ENSDARG00000089637 1673 1.487 - - - 0.781 - - 0.706 - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
26. E2F6 E2F6 1271 1.46 - - - 0.759 - - 0.701 - -
27. erbb2ip 403 1.419 - 0.704 - - - - 0.715 - - erbb2 interacting protein, transcript variant X3
28. CU638740.1_1 CU638740.1_1 387 0.964 - - - 0.964 - - - - -
29. tmem136a ENSDARG00000024920 535 0.961 - - - 0.961 - - - - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
30. apln ENSDARG00000053279 858 0.95 - 0.950 - - - - - - - apelin [Source:ZFIN;Acc:ZDB-GENE-070521-8]
31. cica ENSDARG00000071150 633 0.947 - - - 0.947 - - - - - capicua transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-060503-700]
32. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 0.945 - - - 0.945 - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
33. layna ENSDARG00000035169 515 0.935 - 0.935 - - - - - - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
34. si:ch73-367f21.6 ENSDARG00000089953 46 0.935 - 0.935 - - - - - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
35. map7d2b ENSDARG00000045316 702 0.933 - 0.933 - - - - - - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
36. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 0.932 - 0.932 - - - - - - - cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
37. nsrp1 ENSDARG00000015221 1598 0.932 - 0.932 - - - - - - - nuclear speckle splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2646]
38. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.931 - - - 0.931 - - - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
39. TUBB8P7_2 TUBB8P7_2 565 0.927 - 0.927 - - - - - - -
40. CLDN23_1 CLDN23_1 198 0.925 - 0.925 - - - - - - -
41. clstn2 ENSDARG00000060637 548 0.923 - 0.923 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
42. pqbp1 ENSDARG00000029724 1472 0.923 - - - 0.923 - - - - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
43. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.923 - 0.923 - - - - - - - guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
44. sin3aa ENSDARG00000079716 580 0.922 - 0.922 - - - - - - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
45. WIZ_1 WIZ_1 378 0.922 - 0.922 - - - - - - -
46. zp2.1 ENSDARG00000086352 41 0.921 - 0.921 - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
47. atad1a ENSDARG00000023267 155 0.921 - 0.921 - - - - - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
48. tspan3a ENSDARG00000034753, ENSDARG00000110293, ENSDARG00000112773 973 0.921 - 0.921 - - - - - - - tetraspanin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7787]
49. rpz5 ENSDARG00000075718 1703 0.921 - - - 0.921 - - - - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
50. KLHL30 ENSDARG00000076094 366 0.919 - 0.919 - - - - - - - kelch-like family member 30 [Source:ZFIN;Acc:ZDB-GENE-100913-2]
51. dnmt3 dnmt3 1912 0.917 - 0.917 - - - - - - -
52. ankrd33ba ENSDARG00000058357 214 0.917 - 0.917 - - - - - - - ankyrin repeat domain 33ba [Source:ZFIN;Acc:ZDB-GENE-040724-39]
53. zgc:77056 ENSDARG00000029615 297 0.917 - 0.917 - - - - - - - zgc:77056 [Source:ZFIN;Acc:ZDB-GENE-030131-5248]
54. si:ch211-113a14.28 56 0.916 - 0.916 - - - - - - - si:ch211-113a14.28
55. asb2b ENSDARG00000102490 311 0.916 - 0.916 - - - - - - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
56. RHBDF1 RHBDF1 131 0.916 - 0.916 - - - - - - -
57. anapc1 ENSDARG00000075687 488 0.916 - 0.916 - - - - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
58. mul1a ENSDARG00000021398 438 0.916 - 0.916 - - - - - - - mitochondrial E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-050102-5]
59. slc6a1b ENSDARG00000039647 1301 0.913 - 0.913 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
60. MPV17L MPV17L 39 0.913 - 0.913 - - - - - - -
61. lmbrd1 ENSDARG00000104223 924 0.912 - - - 0.912 - - - - - LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
62. ACTN2 ACTN2 343 0.911 - 0.911 - - - - - - -
63. aldh2.2_1 ENSDARG00000028087 279 0.91 - 0.910 - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
64. zgc:171497 ENSDARG00000100614 1040 0.91 - - - 0.910 - - - - - zgc:171497 [Source:ZFIN;Acc:ZDB-GENE-080220-58]
65. OXR1 OXR1 378 0.909 - 0.909 - - - - - - -
66. cry1b cry1b 152 0.909 - - - - - - 0.909 - -
67. HNRNPUL2 HNRNPUL2 110 0.909 - 0.909 - - - - - - -
68. grin2ab ENSDARG00000070543 31 0.908 - 0.908 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
69. ddx41 666 0.908 - 0.908 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
70. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.907 - 0.907 - - - - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
71. ppargc1b ENSDARG00000101569 3452 0.906 - - - 0.906 - - - - - peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
72. crebrf ENSDARG00000105114 21 0.906 - 0.906 - - - - - - - creb3 regulatory factor [Source:ZFIN;Acc:ZDB-GENE-120203-3]
73. glt8d1 ENSDARG00000040157 120 0.906 - 0.906 - - - - - - - glycosyltransferase 8 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-23]
74. FAAH ENSDARG00000077764 292 0.905 - 0.905 - - - - - - - fatty acid amide hydrolase [Source:ZFIN;Acc:ZDB-GENE-070619-3]
75. agtrap ENSDARG00000077082, ENSDARG00000114680 329 0.904 - 0.904 - - - - - - - angiotensin II receptor-associated protein [Source:ZFIN;Acc:ZDB-GENE-050309-11]
76. MSR1 MSR1 449 0.903 - 0.903 - - - - - - -
77. eif4ebp3 ENSDARG00000054916 583 0.903 - 0.903 - - - - - - - eukaryotic translation initiation factor 4E binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-44]
78. PHC3 ENSDARG00000074604 239 0.901 - 0.901 - - - - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
79. pik3r3a ENSDARG00000103038 1132 0.901 - 0.901 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
80. si:dkey-191j3.3 si:dkey-191j3.3 1987 0.9 - 0.900 - - - - - - -
81. si:dkey-202b22.6 ENSDARG00000045552 190 0.9 - - - - - - 0.900 - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
82. g6pca.1 ENSDARG00000031616 401 0.9 - 0.900 - - - - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
83. crlf1a ENSDARG00000024365 222 0.9 - - - - - - 0.900 - - cytokine receptor-like factor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-397]
84. PATZ1 ENSDARG00000076584 1116 0.898 - 0.898 - - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
85. C3H16orf58 C3H16orf58 487 0.898 - 0.898 - - - - - - -
86. si:dkey-71l1.1 ENSDARG00000052411 11 0.897 - 0.897 - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
87. BX547934.1 ENSDARG00000097061 35 0.897 - 0.897 - - - - - - -
88. capn3b ENSDARG00000043035, ENSDARG00000113539 229 0.897 - 0.897 - - - - - - - calpain 3b [Source:ZFIN;Acc:ZDB-GENE-041001-149]
89. CU694368.1 CU694368.1 56 0.897 - 0.897 - - - - - - -
90. si:dkey-269o24.7 si:dkey-269o24.7 28 0.897 - 0.897 - - - - - - -
91. si:ch211-149a19.3 ENSDARG00000079456 115 0.897 - 0.897 - - - - - - - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
92. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 0.897 - 0.897 - - - - - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
93. BX927369.7 BX927369.7 12 0.897 - 0.897 - - - - - - -
94. si:dkey-234l24.7 ENSDARG00000113738 8 0.897 - 0.897 - - - - - - - si:dkey-234l24.7 [Source:ZFIN;Acc:ZDB-GENE-050420-90]
95. si:dkey-222h21.11 ENSDARG00000092984 13 0.897 - 0.897 - - - - - - - si:dkey-222h21.11 [Source:ZFIN;Acc:ZDB-GENE-081031-32]
96. si:dkey-7f3.14 ENSDARG00000095050 18 0.897 - 0.897 - - - - - - - si:dkey-7f3.14 [Source:ZFIN;Acc:ZDB-GENE-100922-186]
97. btbd2 btbd2 1296 0.897 - 0.897 - - - - - - -
98. slc52a3 ENSDARG00000042737 67 0.897 - 0.897 - - - - - - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
99. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 0.897 - 0.897 - - - - - - -
100. SAMD9L SAMD9L 10 0.897 - 0.897 - - - - - - -

There are 1042 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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