Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp43a

Gene Name Gene ID Reads Annotation
usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]










Genes with expression patterns similar to usp43a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
2. si:ch211-198d23.1 ENSDARG00000092574 104 2.682 0.909 - - - - 0.777 0.996 - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
3. CACHD1 ENSDARG00000061590 1287 1.949 - - - - - - 0.976 0.973 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
4. ankrd50l ENSDARG00000007077 1115 1.913 - - - - - - 0.976 0.937 - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
5. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 1.911 - - - - - - 0.921 0.990 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
6. dnajb9a ENSDARG00000052072 578 1.889 0.891 - - - - - 0.998 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
7. SEMA4B SEMA4B 1259 1.882 - - - - - - 0.948 0.934 -
8. btf3l4_1 ENSDARG00000089681 1089 1.879 - - - - - - 0.989 0.890 - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
9. PLXNB2 PLXNB2 99 1.866 - - - - - 0.867 0.999 - -
10. fbxo30a ENSDARG00000058561 867 1.859 - - - - - - 0.990 0.869 - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
11. nek2 ENSDARG00000005619 273 1.853 - - - - - 0.896 - 0.957 - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
12. si:dkey-58f10.12 ENSDARG00000092680 258 1.849 - - - - - 0.889 - 0.960 - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
13. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.835 - - - - - - 0.995 0.840 - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
14. phf21ab ENSDARG00000021378 1706 1.83 - - - - - - 0.991 0.839 - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
15. zgc:165653 ENSDARG00000104713 1603 1.808 - - - - - - 0.940 0.868 - zgc:165653 [Source:ZFIN;Acc:ZDB-GENE-070620-24]
16. chst11 ENSDARG00000034375 2701 1.804 - - - - - - 0.958 0.846 - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
17. znf277 ENSDARG00000025346, ENSDARG00000113592 288 1.784 - - - - - 0.825 - 0.959 - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
18. CD53 CD53 108 1.776 0.911 - - - - 0.865 - - -
19. trabd ENSDARG00000010445 195 1.771 - - - - - 0.781 - 0.990 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
20. BX569778.1 BX569778.1 36 1.762 0.911 - - - - 0.851 - - -
21. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.759 0.911 - - - - 0.848 - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
22. nelfa ENSDARG00000061411, ENSDARG00000116904 581 1.744 0.751 - - - - - 0.993 - - negative elongation factor complex member A [Source:ZFIN;Acc:ZDB-GENE-030131-6400]
23. b3gnt3.3 ENSDARG00000093521 430 1.743 - - - - - 0.828 0.915 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-12]
24. si:ch211-51o18.2 si:ch211-51o18.2 111 1.74 - - - - - 0.741 0.999 - -
25. si:dkey-57k17.1 ENSDARG00000104697 442 1.732 - - - - - 0.753 - 0.979 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
26. spata2l ENSDARG00000068814 152 1.731 - - - - - 0.773 - 0.958 - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
27. fam83h fam83h 1448 1.713 - - - - - - 0.929 0.784 -
28. cdk16_1 ENSDARG00000032072 2031 1.701 - - - - - 0.731 0.970 - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
29. clptm1l ENSDARG00000021048 1234 1.7 - - - - - 0.716 0.984 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
30. si:dkey-162h11.2 si:dkey-162h11.2 257 1.699 0.911 - - - - - - 0.788 -
31. BX572619.1 ENSDARG00000089303 78 1.691 0.801 0.890 - - - - - - - wu:fa25f02 [Source:NCBI gene;Acc:562425]
32. CLMN ENSDARG00000096867 73 1.688 0.909 - - - - 0.779 - - - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
33. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.684 - - - - - - 0.929 0.755 - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
34. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.672 - - - - - - 0.941 0.731 - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
35. mlh3 ENSDARG00000056334 142 1.641 0.819 - - - - 0.822 - - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
36. zgc:174573 ENSDARG00000079035 89 1.64 0.759 - - - - 0.881 - - - zgc:174573 [Source:ZFIN;Acc:ZDB-GENE-030131-2123]
37. TOR4A TOR4A 70 1.64 - 0.890 - - - 0.750 - - -
38. hnrnpa3 ENSDARG00000059351 453 1.629 - 0.815 - - - - - 0.814 - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
39. tjp2b ENSDARG00000023443 1654 1.627 - - - - - - 0.905 0.722 - tight junction protein 2b (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-040718-58]
40. frem1a ENSDARG00000069473 1847 1.626 - - - - - 0.713 0.913 - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
41. trmt5 ENSDARG00000069278 228 1.617 - 0.711 - - - 0.906 - - - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
42. FTL FTL 53 1.575 - 0.794 - - - 0.781 - - -
43. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.561 - - - - - - 0.844 0.717 - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
44. klhl17 ENSDARG00000037324, ENSDARG00000115666 442 1.535 0.722 0.813 - - - - - - - kelch-like family member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8131]
45. cc2d2a ENSDARG00000090971 363 1.521 0.818 0.703 - - - - - - - coiled-coil and C2 domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2291]
46. ecm2 ENSDARG00000071549 1527 1.455 - - - - - 0.717 0.738 - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
47. SLITRK6 ENSDARG00000098769 217 1 - - - - - - 1.000 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
48. BX324179.3 BX324179.3 326 0.999 - - - - - - 0.999 - -
49. PDZD8 ENSDARG00000088699 844 0.999 - - - - - - 0.999 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
50. PSD PSD 367 0.999 - - - - - - 0.999 - -
51. AMDHD1 ENSDARG00000007366 89 0.999 - - - - - - 0.999 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
52. lppr4a lppr4a 141 0.999 - - - - - - 0.999 - -
53. sult3st1 ENSDARG00000009885 218 0.999 - - - - - - 0.999 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
54. zgc:173962 zgc:173962 67 0.999 - - - - - - 0.999 - -
55. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.999 - - - - - - 0.999 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
56. PRR5 PRR5 630 0.999 - - - - - - 0.999 - -
57. ZNF337_10 ZNF337_10 183 0.999 - - - - - - 0.999 - -
58. znf687a ENSDARG00000102774 393 0.999 - - - - - - 0.999 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
59. si:ch73-108h4.3 si:ch73-108h4.3 193 0.999 - - - - - - 0.999 - -
60. baz2a ENSDARG00000102974 266 0.999 - - - - - - 0.999 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
61. ICT1 356 0.999 - - - - - - 0.999 - - immature colon carcinoma transcript 1
62. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.999 - - - - - - 0.999 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
63. zgc:63691 zgc:63691 180 0.999 - - - - - - 0.999 - -
64. asb3 ENSDARG00000005246 317 0.999 - - - - - - 0.999 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
65. bin2b ENSDARG00000010255 2649 0.999 - - - - - - 0.999 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
66. asb6 ENSDARG00000007125 389 0.999 - - - - - - 0.999 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
67. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.999 - - - - - - 0.999 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
68. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.999 - - - - - - 0.999 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
69. socs3a ENSDARG00000025428 349 0.999 - - - - - - 0.999 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
70. illr4 ENSDARG00000008075 164 0.998 - - - - - - 0.998 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
71. zdhhc3 zdhhc3 152 0.998 - - - - - - 0.998 - -
72. ERRFI1 ERRFI1 664 0.998 - - - - - - 0.998 - -
73. plxna4 ENSDARG00000019328 782 0.998 - - - - - - 0.998 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
74. irf8 ENSDARG00000056407 85 0.998 - - - - - - 0.998 - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
75. unk ENSDARG00000000935 353 0.998 - - - - - - 0.998 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
76. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.998 - - - - - - 0.998 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
77. PRKD3 ENSDARG00000079967 192 0.998 - - - - - - 0.998 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
78. dhodh ENSDARG00000051889 401 0.998 - - - - - - 0.998 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
79. zgc:136763 zgc:136763 190 0.998 - - - - - - 0.998 - -
80. si:ch211-254c8.2 233 0.998 - - - - - - - 0.998 - si:ch211-254c8.2, transcript variant X4
81. VPS37C ENSDARG00000031836 906 0.998 - - - - - - 0.998 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
82. si:ch73-67c22.3 si:ch73-67c22.3 30 0.997 - - - - - - - 0.997 -
83. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.997 - - - - - - 0.997 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
84. cul1b ENSDARG00000007691 719 0.997 - - - - - - 0.997 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
85. htra3a ENSDARG00000052895 28 0.997 - - - - - - - 0.997 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
86. FCHSD2 FCHSD2 35 0.997 - - - - - - - 0.997 -
87. BX682234.2 BX682234.2 28 0.997 - - - - - - - 0.997 -
88. igfbp3 ENSDARG00000099144 269 0.997 - - - - - - 0.997 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
89. nhp2l1a nhp2l1a 993 0.997 - - - - - - 0.997 - -
90. zgc:162612 ENSDARG00000079699 244 0.997 - - - - - - 0.997 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
91. tmco3 ENSDARG00000075108 368 0.997 - - - - - - 0.997 - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
92. CR936337.1 CR936337.1 38 0.997 - - - - - - - 0.997 -
93. JAKMIP3 ENSDARG00000100708 56 0.997 - - - - - - - 0.997 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
94. sv2ba ENSDARG00000057427 33 0.997 - - - - - - - 0.997 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
95. prdm5 ENSDARG00000006288 472 0.997 - - - - - - 0.997 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
96. FBXO31 ENSDARG00000062195 753 0.997 - - - - - - 0.997 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
97. plekhh1 ENSDARG00000053835 2123 0.997 - - - - - - 0.997 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
98. armc1l ENSDARG00000020887 1219 0.997 - - - - - - 0.997 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
99. CR848836.5 CR848836.5 42 0.997 - - - - - - - 0.997 -
100. mob2b ENSDARG00000012005 395 0.997 - - - - - - 0.997 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]

There are 1427 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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