Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for urb2

Gene Name Gene ID Reads Annotation
urb2 ENSDARG00000003217 196 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2621]










Genes with expression patterns similar to urb2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. urb2 ENSDARG00000003217 196 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2621]
2. wu:fb68b01 wu:fb68b01 42 1.624 - - - - - 0.710 0.914 - -
3. zgc:194314 zgc:194314 982 0.972 - - - - - - 0.972 - -
4. nme2a ENSDARG00000043820 8 0.972 - - - - - - 0.972 - - NME/NM23 nucleoside diphosphate kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7656]
5. ptger1b ENSDARG00000104847 91 0.924 - - - - - - 0.924 - - prostaglandin E receptor 1b (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-100922-278]
6. CR847511.1 CR847511.1 80 0.917 - - - - - - 0.917 - -
7. slc25a38a ENSDARG00000059805 236 0.914 - - - - - - 0.914 - - solute carrier family 25, member 38a [Source:ZFIN;Acc:ZDB-GENE-060929-320]
8. CABZ01079251.1 ENSDARG00000100498 38 0.914 - - - - - - 0.914 - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
9. zp3a.1 ENSDARG00000042129 18 0.914 - - - - - - 0.914 - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
10. BX640547.1_1 ENSDARG00000092775 76 0.914 - - - - - - 0.914 - - uncharacterized LOC110439536 [Source:NCBI gene;Acc:110439536]
11. BX004828.1 BX004828.1 31 0.914 - - - - - - 0.914 - -
12. mtmr10 ENSDARG00000010601 37 0.914 - - - - - - 0.914 - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
13. CR931813.1 ENSDARG00000103293 84 0.914 - - - - - - 0.914 - -
14. slc4a1b ENSDARG00000024560 172 0.903 - - - - - - 0.903 - - solute carrier family 4 (anion exchanger), member 1b (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-110215-2]
15. INTS4 ENSDARG00000102953 38 0.894 - - - - - - 0.894 - - integrator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-120215-81]
16. syne2a 63 0.889 - - - - - - 0.889 - - spectrin repeat containing, nuclear envelope 2a
17. cyp2k16 ENSDARG00000102981 560 0.889 - 0.889 - - - - - - - cytochrome P450, family 2, subfamily K, polypeptide16 [Source:ZFIN;Acc:ZDB-GENE-041010-37]
18. si:dkey-29f21.5 si:dkey-29f21.5 3 0.888 - - - - - - 0.888 - -
19. zbtb3 ENSDARG00000036235 155 0.886 - - - - - - 0.886 - - zinc finger and BTB domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050506-105]
20. mtmr6 ENSDARG00000016794 425 0.885 - 0.885 - - - - - - - myotubularin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5557]
21. ACSL1 ACSL1 240 0.884 - - - - - - 0.884 - -
22. ctso ENSDARG00000052855 29 0.881 - - - - - - 0.881 - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
23. hvcn1 ENSDARG00000040338 571 0.879 - - - - - 0.879 - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]
24. VAV2 ENSDARG00000044718, ENSDARG00000114652 422 0.877 - 0.877 - - - - - - - vav 2 guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-091204-420]
25. tpst2 ENSDARG00000099155 196 0.869 0.869 - - - - - - - - tyrosylprotein sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1400]
26. si:rp71-80o10.4 ENSDARG00000094316 279 0.867 - 0.867 - - - - - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
27. gdf6a ENSDARG00000053479 121 0.865 - - - - - - 0.865 - - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
28. CR812472.2 ENSDARG00000097380 62 0.865 - - - - - 0.865 - - -
29. mapk8b ENSDARG00000009870 295 0.864 - - - - - - 0.864 - - mitogen-activated protein kinase 8b [Source:ZFIN;Acc:ZDB-GENE-010202-1]
30. slc25a35 ENSDARG00000102783 129 0.862 - - - - - - 0.862 - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
31. prrg2 ENSDARG00000087193 15 0.861 - - - - - - 0.861 - - proline rich Gla (G-carboxyglutamic acid) 2 [Source:ZFIN;Acc:ZDB-GENE-130625-1]
32. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.861 - - - - - - 0.861 - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
33. TRIOBP TRIOBP 92 0.858 - - - - - - 0.858 - -
34. crygn2 ENSDARG00000030411 2551 0.858 - - - - - - 0.858 - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
35. acp5b ENSDARG00000101456, ENSDARG00000109721, ENSDARG00000110522 48 0.858 - - - - - - 0.858 - - acid phosphatase 5b, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040718-151]
36. prkchb ENSDARG00000043243 126 0.856 0.856 - - - - - - - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
37. adck3 83 0.855 - - - - - 0.855 - - - aarF domain containing kinase 3
38. trpt1 ENSDARG00000037628 1081 0.854 - - - - - 0.854 - - - tRNA phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050227-16]
39. TTBK1_1 TTBK1_1 132 0.852 0.852 - - - - - - - -
40. rem2 ENSDARG00000074064, ENSDARG00000109687 219 0.85 - - - - - - 0.850 - - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
41. pim2 ENSDARG00000059001 1893 0.842 0.842 - - - - - - - - Pim-2 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-000831-6]
42. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 0.842 - - - - - - 0.842 - -
43. Sep-10 Sep-10 440 0.839 - - - - - - 0.839 - -
44. METTL24 ENSDARG00000075817 126 0.839 - 0.839 - - - - - - - methyltransferase like 24 [Source:ZFIN;Acc:ZDB-GENE-070424-138]
45. dnajc17 ENSDARG00000104959 70 0.838 - - - - - - 0.838 - - DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:ZFIN;Acc:ZDB-GENE-040426-894]
46. si:dkey-23c22.4 si:dkey-23c22.4 556 0.836 - - - - - - 0.836 - -
47. rab4a ENSDARG00000019144 192 0.835 - - - - - - 0.835 - - RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
48. TMEM230 TMEM230 351 0.834 - 0.834 - - - - - - -
49. wu:fd14a06 wu:fd14a06 243 0.831 0.831 - - - - - - - -
50. cpt2 ENSDARG00000038618, ENSDARG00000112216 1040 0.822 - 0.822 - - - - - - - carnitine palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6719]
51. smad9 368 0.82 - 0.820 - - - - - - - SMAD family member 9, transcript variant X1
52. flvcr2b ENSDARG00000031506 170 0.818 - 0.818 - - - - - - - feline leukemia virus subgroup C cellular receptor family, member 2b [Source:ZFIN;Acc:ZDB-GENE-041210-312]
53. cep72 ENSDARG00000105258 344 0.816 0.816 - - - - - - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
54. nsd1b ENSDARG00000060705 88 0.816 - - - - - - 0.816 - - nuclear receptor binding SET domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-080519-2]
55. nfia ENSDARG00000062420 573 0.815 - 0.815 - - - - - - - nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
56. rpl37_1 ENSDARG00000034291, ENSDARG00000076360 365 0.813 - 0.813 - - - - - - - ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-040625-39]
57. sh3gl3b ENSDARG00000007302 573 0.811 - - - - - 0.811 - - - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
58. PRKRIR PRKRIR 261 0.81 0.810 - - - - - - - -
59. nfxl1 ENSDARG00000070127 392 0.81 - 0.810 - - - - - - - nuclear transcription factor, X-box binding-like 1 [Source:ZFIN;Acc:ZDB-GENE-110411-178]
60. DEDD ENSDARG00000029783 530 0.808 - - - - - 0.808 - - - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
61. fam213b ENSDARG00000029795 387 0.808 - 0.808 - - - - - - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
62. pdcd6ip ENSDARG00000025269 2522 0.806 0.806 - - - - - - - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
63. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 0.804 - - - - - 0.804 - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
64. SENP2 ENSDARG00000073837 1411 0.804 - 0.804 - - - - - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
65. si:ch211-173n18.4 129 0.803 - - - - - 0.803 - - - si:ch211-173n18.4, transcript variant X1
66. ARHGAP32_1 ARHGAP32_1 124 0.802 - - - - - - 0.802 - -
67. vipr1b ENSDARG00000059058 62 0.8 - - - - 0.800 - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
68. capn10 ENSDARG00000076634 78 0.798 - - - - - - 0.798 - - calpain 10 [Source:ZFIN;Acc:ZDB-GENE-110411-137]
69. igsf9b ENSDARG00000010408 786 0.798 - 0.798 - - - - - - - immunoglobulin superfamily, member 9b [Source:ZFIN;Acc:ZDB-GENE-060810-28]
70. CR847504.1 ENSDARG00000102515 29 0.795 - - - - - - 0.795 - -
71. cln3 ENSDARG00000037865 539 0.795 0.795 - - - - - - - - ceroid-lipofuscinosis, neuronal 3 [Source:ZFIN;Acc:ZDB-GENE-041114-174]
72. CR854923.1 CR854923.1 18 0.795 - - - - - - 0.795 - -
73. tbx18 ENSDARG00000036930 390 0.795 - - - - - - 0.795 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
74. ZBTB22 ZBTB22 1053 0.792 - - - - - - 0.792 - -
75. haao ENSDARG00000076487 143 0.792 - - - - - - 0.792 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
76. zgc:162183 ENSDARG00000074663, ENSDARG00000116229 403 0.792 0.792 - - - - - - - - zgc:162183 [Source:ZFIN;Acc:ZDB-GENE-070410-30]
77. C18H19orf54 C18H19orf54 460 0.791 - - - - 0.791 - - - -
78. si:dkey-165n16.1 ENSDARG00000087048 283 0.791 - 0.791 - - - - - - - si:dkey-165n16.1 [Source:ZFIN;Acc:ZDB-GENE-100922-224]
79. slc25a25b ENSDARG00000035468, ENSDARG00000116184 544 0.79 - 0.790 - - - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25b [Source:ZFIN;Acc:ZDB-GENE-060526-340]
80. ift140 ENSDARG00000031886 573 0.789 - 0.789 - - - - - - - intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]
81. si:dkey-19a16.4 ENSDARG00000071657 190 0.788 - 0.788 - - - - - - - si:dkey-19a16.4 [Source:ZFIN;Acc:ZDB-GENE-050208-652]
82. par1 par1 564 0.788 - - - - - 0.788 - - -
83. morc3a ENSDARG00000056679 648 0.786 0.786 - - - - - - - - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
84. MYO1C MYO1C 140 0.784 0.784 - - - - - - - -
85. PPM1J ENSDARG00000074690 109 0.784 - - - - - - 0.784 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
86. rmi1 ENSDARG00000041376 674 0.783 - - - - - - 0.783 - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
87. C17H10orf137 C17H10orf137 273 0.78 - 0.780 - - - - - - -
88. PIGB ENSDARG00000105011 277 0.78 0.780 - - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
89. ripply1 ENSDARG00000054103 367 0.778 - 0.778 - - - - - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
90. per3 ENSDARG00000010519 331 0.778 0.778 - - - - - - - - period circadian clock 3 [Source:ZFIN;Acc:ZDB-GENE-000804-1]
91. napepld ENSDARG00000009252 228 0.778 - - - - - 0.778 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
92. drd4-rs ENSDARG00000001912 45 0.778 - - - - - - 0.778 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
93. znf644b ENSDARG00000102025 258 0.777 - - - - - 0.777 - - - zinc finger protein 644b [Source:ZFIN;Acc:ZDB-GENE-120214-23]
94. tap1 ENSDARG00000079766 75 0.775 - - - - - 0.775 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
95. als2b ENSDARG00000076924 738 0.775 - 0.775 - - - - - - - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
96. zfyve21 ENSDARG00000027887 1687 0.774 - 0.774 - - - - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
97. dzip1 ENSDARG00000000943, ENSDARG00000113867 911 0.773 0.773 - - - - - - - - DAZ interacting zinc finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-040526-1]
98. si:ch211-274p24.2 ENSDARG00000095185 92 0.773 - 0.773 - - - - - - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
99. ZNF337_3 ZNF337_3 561 0.773 0.773 - - - - - - - -
100. med21 ENSDARG00000026839 1083 0.773 - 0.773 - - - - - - - mediator complex subunit 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2763]

There are 347 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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