Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ubr7

Gene Name Gene ID Reads Annotation
ubr7 ENSDARG00000005536 1108 ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]










Genes with expression patterns similar to ubr7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubr7 ENSDARG00000005536 1108 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-1535]
2. zgc:110540 ENSDARG00000054929 2154 1.565 - - - - - 0.753 0.812 - - zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
3. ing3 ENSDARG00000034326 1326 1.544 - 0.844 - - - - 0.700 - - inhibitor of growth family, member 3 [Source:ZFIN;Acc:ZDB-GENE-040109-3]
4. fam53b ENSDARG00000016156 2143 1.518 - - - - - 0.733 0.785 - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
5. prp19 prp19 4804 1.512 - - - - - 0.731 0.781 - -
6. arfgef2 ENSDARG00000074702 1593 1.484 - - - - - 0.752 0.732 - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
7. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.476 - - - - - 0.745 0.731 - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
8. syne1a ENSDARG00000009499, ENSDARG00000116204 601 1.47 - - - - - 0.743 - 0.727 - spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]
9. pmepa1 ENSDARG00000039325 652 1.464 - - - - - 0.730 0.734 - - prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
10. ppip5k2 ENSDARG00000078441 1074 1.462 - 0.755 - - - 0.707 - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
11. taf11 ENSDARG00000037855 2624 1.461 - - - - - 0.703 0.758 - - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
12. polr2k ENSDARG00000075616 2047 1.446 - - - - - - 0.707 0.739 - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
13. RAC1 RAC1 2008 1.442 - 0.706 - - - - 0.736 - -
14. HYKK HYKK 261 1.438 - - - - - - 0.708 0.730 -
15. CDCA7L CDCA7L 1365 0.925 - - - - - - - 0.925 -
16. MAP4_1 MAP4_1 1153 0.909 - - - - - 0.909 - - -
17. TP53BP1 ENSDARG00000079000 997 0.886 - - - - - 0.886 - - - tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
18. tax1bp1a ENSDARG00000098288 587 0.88 - - - - - - 0.880 - - Tax1 (human T-cell leukemia virus type I) binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-587]
19. C13H10orf32 C13H10orf32 465 0.876 - - - - - - 0.876 - -
20. psmd11a ENSDARG00000060150 4529 0.876 - - - - - - 0.876 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
21. ufc1 ENSDARG00000022340 2618 0.875 - - - - - - 0.875 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
22. srcap ENSDARG00000005236 1740 0.873 - - - 0.873 - - - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
23. hsf2 ENSDARG00000053097 1188 0.869 - - - - - - - 0.869 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
24. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.866 - - - - - - 0.866 - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
25. ARHGAP35 2409 0.864 - - - - - - - 0.864 - Rho GTPase activating protein 35b, transcript variant X2
26. ufd1l ENSDARG00000010051 893 0.863 - 0.863 - - - - - - - ubiquitin recognition factor in ER associated degradation 1 [Source:ZFIN;Acc:ZDB-GENE-040718-150]
27. stk40 ENSDARG00000098135 2683 0.858 - - - - - - - 0.858 - serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
28. paxip1 ENSDARG00000005606 1417 0.856 - 0.856 - - - - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
29. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 0.854 - - - - - - 0.854 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
30. TNS3 TNS3 1286 0.851 - - - - - 0.851 - - -
31. APLF APLF 691 0.85 - - - - - 0.850 - - -
32. slc16a4 ENSDARG00000042807, ENSDARG00000113242 383 0.845 - - - - - 0.845 - - - solute carrier family 16, member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-602]
33. gcc1 ENSDARG00000045541 1821 0.845 - - - - - - - 0.845 - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
34. psmg3 ENSDARG00000098391 920 0.836 - - - - - - 0.836 - - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
35. irx3b ENSDARG00000031138 2538 0.835 - - - - - - - 0.835 - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
36. KCTD9 KCTD9 147 0.834 - - - - - 0.834 - - -
37. rragca ENSDARG00000069829, ENSDARG00000110332 1110 0.833 - - - - - - 0.833 - - Ras-related GTP binding Ca [Source:ZFIN;Acc:ZDB-GENE-050522-355]
38. ubtf ENSDARG00000035066 4070 0.832 - - - - - - - 0.832 - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
39. map3k1 ENSDARG00000098405 3043 0.831 - - - - - 0.831 - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
40. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 0.83 - - - - - - 0.830 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
41. pcca ENSDARG00000028982, ENSDARG00000110281 3212 0.829 - 0.829 - - - - - - - propionyl-CoA carboxylase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-040718-246]
42. znf770 ENSDARG00000070786 796 0.829 - - - - - - 0.829 - - zinc finger protein 770 [Source:ZFIN;Acc:ZDB-GENE-030131-1505]
43. mob1bb ENSDARG00000012953 873 0.828 - - - - - 0.828 - - - MOB kinase activator 1Bb [Source:ZFIN;Acc:ZDB-GENE-050522-58]
44. pspc1 ENSDARG00000006621 966 0.827 - - - - - - - 0.827 - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
45. srrt ENSDARG00000017762, ENSDARG00000114824 2158 0.826 - - - - - - 0.826 - - serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
46. tbp ENSDARG00000014994 1591 0.825 - - - 0.825 - - - - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
47. ppm1da ENSDARG00000009273 7713 0.823 - - - - - - - 0.823 - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
48. nras ENSDARG00000038225 450 0.822 - - - - - - 0.822 - - NRAS proto-oncogene, GTPase [Source:ZFIN;Acc:ZDB-GENE-990415-166]
49. acbd3 ENSDARG00000042623 2643 0.82 - - - - - 0.820 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
50. eef2a.1 ENSDARG00000042094 1781 0.82 - - - - - - - 0.820 - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
51. nsmce1 ENSDARG00000098780 289 0.818 - - - - - 0.818 - - - NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
52. nup98 ENSDARG00000074955 3998 0.815 - - - - - 0.815 - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
53. ivns1abpb ENSDARG00000013946 1972 0.814 - - - - - 0.814 - - - influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]
54. svopl ENSDARG00000057983, ENSDARG00000116460 975 0.814 - - - - - 0.814 - - - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
55. sema3gb ENSDARG00000013607 1531 0.813 - - - - - 0.813 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
56. farsb ENSDARG00000016864 6776 0.812 - - - - - - - 0.812 - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
57. si:ch73-22o12.1 ENSDARG00000062831 251 0.812 - - - - - - 0.812 - - si:ch73-22o12.1 [Source:ZFIN;Acc:ZDB-GENE-110411-27]
58. ctdsp1 ENSDARG00000040674 2828 0.812 - - - - - 0.812 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
59. sar1b ENSDARG00000103403 1699 0.811 - - - - - - 0.811 - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
60. BX539313.3 ENSDARG00000098016 638 0.81 - - - - - 0.810 - - -
61. xrn2 ENSDARG00000101900 2875 0.81 - - - - - 0.810 - - - 5'-3' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2874]
62. rxraa ENSDARG00000057737 750 0.808 - 0.808 - - - - - - - retinoid X receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-070314-2]
63. kat7 kat7 642 0.807 0.807 - - - - - - - -
64. ccdc93 ENSDARG00000040678 1131 0.806 - - - - - - - 0.806 - coiled-coil domain containing 93 [Source:ZFIN;Acc:ZDB-GENE-060421-8315]
65. C21HXorf40A C21HXorf40A 216 0.805 - - - - - - 0.805 - -
66. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 0.805 - - - - - 0.805 - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
67. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 0.805 - - - - - - 0.805 - - SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
68. TMEM185A TMEM185A 5505 0.805 - - - - - 0.805 - - -
69. rpgrb ENSDARG00000057074 117 0.804 - - - - - 0.804 - - - retinitis pigmentosa GTPase regulator b [Source:ZFIN;Acc:ZDB-GENE-081015-2]
70. socs2 ENSDARG00000045557 340 0.804 - - - - - 0.804 - - - suppressor of cytokine signaling 2 [Source:ZFIN;Acc:ZDB-GENE-041210-171]
71. CABZ01070045.1 CABZ01070045.1 1322 0.803 - - - - - - 0.803 - -
72. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 0.802 - - - - - - 0.802 - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
73. phf17 phf17 790 0.802 - - - - - - 0.802 - -
74. cisd2 ENSDARG00000052703 2841 0.802 - - - - - - 0.802 - - CDGSH iron sulfur domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1381]
75. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 0.801 - - - - - - 0.801 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
76. MTFP1 210 0.8 - - - - - - 0.800 - - mitochondrial fission process 1
77. zgc:171489 ENSDARG00000052300 119 0.798 - - - - - 0.798 - - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
78. tmem50a ENSDARG00000015757 3244 0.798 - - - - - - 0.798 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
79. ruvbl1 ENSDARG00000002591 2381 0.798 - - - - - - 0.798 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
80. dmxl2 ENSDARG00000091293 1593 0.798 - - - - - - 0.798 - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
81. tor1 ENSDARG00000077950 1027 0.798 - - - - - 0.798 - - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
82. taf13 ENSDARG00000070834, ENSDARG00000109314 1982 0.797 - 0.797 - - - - - - - TATA-box binding protein associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2873]
83. fam219aa ENSDARG00000016396 1788 0.797 - - - - - - 0.797 - - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
84. yipf5 ENSDARG00000007279 2334 0.794 - - - - - 0.794 - - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
85. xkrx ENSDARG00000044011 1788 0.792 - 0.792 - - - - - - - XK related X-linked [Source:ZFIN;Acc:ZDB-GENE-041114-108]
86. psmd3 ENSDARG00000018124 540 0.792 - - - - - - 0.792 - - proteasome 26S subunit, non-ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1444]
87. fam134c fam134c 1550 0.791 - - - - - - - 0.791 -
88. ptpn13 ENSDARG00000103699 2866 0.791 - - - - - 0.791 - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
89. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 0.79 - - - - - 0.790 - - - zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
90. anapc16 ENSDARG00000013822 5857 0.789 - - - - - - 0.789 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
91. selt1a 9746 0.788 - - - - - - 0.788 - - selenoprotein T, 1a
92. LEPROTL1 ENSDARG00000104871 3019 0.788 - - - - - - 0.788 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
93. plekha5 ENSDARG00000045870 1177 0.786 - 0.786 - - - - - - - pleckstrin homology domain containing, family A member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-25]
94. rspry1 ENSDARG00000062558 1424 0.786 - - - - - - 0.786 - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
95. pnpla7a ENSDARG00000062986 1793 0.786 - - - - - - 0.786 - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
96. gna11b ENSDARG00000053326 5118 0.786 - 0.786 - - - - - - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
97. sp3a ENSDARG00000001549 1994 0.786 - - - - - - - 0.786 - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
98. cdca5 ENSDARG00000044437 2041 0.785 - - - - - - - 0.785 - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
99. ATP6AP1L_1 ATP6AP1L_1 508 0.784 - - - - - - 0.784 - -
100. ITCH ITCH 1226 0.784 - - - - - - 0.784 - -

There are 555 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA