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Results for ube3d

Gene Name Gene ID Reads Annotation
ube3d ENSDARG00000026178 244 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]










Genes with expression patterns similar to ube3d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ube3d ENSDARG00000026178 244 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
2. s1pr5b ENSDARG00000052192 52 1.907 0.989 0.918 - - - - - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
3. adam17b ENSDARG00000093093 792 1.88 - - - - - 0.924 - - 0.956 ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
4. CTIF ENSDARG00000090617 270 1.863 0.870 - - - - - - - 0.993 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
5. CT573476.1 CT573476.1 74 1.86 - 0.912 - - - 0.948 - - -
6. WIPI1 ENSDARG00000040657 138 1.858 - 0.887 - - - 0.971 - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
7. PEG3_22 PEG3_22 33 1.845 - 0.876 - - - 0.969 - - -
8. osbpl1a ENSDARG00000105147 42 1.829 - 0.858 - - - 0.971 - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
9. bmper ENSDARG00000101980 668 1.826 - - - - - 0.863 - - 0.963 BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
10. zgc:173548 ENSDARG00000070048 558 1.822 - - - - - 0.849 - - 0.973 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
11. tprn ENSDARG00000101102 97 1.822 0.929 0.893 - - - - - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
12. si:dkey-234h16.7 ENSDARG00000095754 115 1.81 0.897 0.913 - - - - - - - si:dkey-234h16.7 [Source:ZFIN;Acc:ZDB-GENE-060601-3]
13. bre bre 1233 1.776 - - - - - 0.860 - - 0.916
14. ARHGAP44 ENSDARG00000104549 91 1.77 0.926 0.844 - - - - - - - Rho GTPase activating protein 44 [Source:ZFIN;Acc:ZDB-GENE-120206-2]
15. GPR17 ENSDARG00000062030 713 1.769 - 0.891 - - - - - - 0.878 G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
16. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.768 - - - - - 0.867 - - 0.901 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
17. smg6 ENSDARG00000100481 493 1.76 0.781 - - - - - - - 0.979 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
18. tnip1 ENSDARG00000015653 94 1.758 0.904 - - - - 0.854 - - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
19. BX088708.1 BX088708.1 6503 1.75 - - - - - 0.826 - - 0.924
20. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.748 - - - - - 0.769 - - 0.979 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
21. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.747 - 0.792 - - - 0.955 - - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
22. mntb ENSDARG00000073988 1023 1.746 - 0.842 - - - - - - 0.904 MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
23. cnot3b ENSDARG00000019842 838 1.739 - - - - - 0.795 - - 0.944 CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
24. CEP152 ENSDARG00000075725 391 1.739 0.761 - - - - - - - 0.978 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
25. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 1.732 0.965 - - - - - 0.767 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
26. CCKBR CCKBR 88 1.731 - 0.893 - - - 0.838 - - -
27. sema4ab ENSDARG00000062352 409 1.728 0.748 - - - - - - - 0.980 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
28. CABZ01072828.1 CABZ01072828.1 67 1.723 - - - - - 0.976 0.747 - -
29. timeless ENSDARG00000078497 1114 1.719 - 0.884 - - - 0.835 - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
30. rab11fip3 ENSDARG00000016490 661 1.714 - - - - - - 0.723 - 0.991 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
31. qser1 ENSDARG00000074750 597 1.703 - - - - - 0.717 - - 0.986 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
32. aga ENSDARG00000004889, ENSDARG00000114305 368 1.696 - 0.767 - - - 0.929 - - - aspartylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-040426-2311]
33. DLEU7 DLEU7 91 1.694 - 0.733 - - - 0.961 - - -
34. ftsjd1 ftsjd1 137 1.692 0.756 - - - - 0.936 - - -
35. psen1 ENSDARG00000004870 1590 1.689 - - - - - 0.805 - - 0.884 presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
36. polr1d ENSDARG00000037570 860 1.685 - 0.745 - - - - - - 0.940 RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
37. pip5k1bb ENSDARG00000006508 2812 1.678 0.857 - - - - 0.821 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
38. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 1.672 0.820 - - - - 0.852 - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
39. cenpp ENSDARG00000044135 96 1.672 0.954 0.718 - - - - - - - centromere protein P [Source:ZFIN;Acc:ZDB-GENE-040801-74]
40. larp1 ENSDARG00000101722 976 1.669 - - - - - 0.731 - - 0.938 La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
41. crfb8 crfb8 392 1.666 0.897 - - - - 0.769 - - -
42. gid8b ENSDARG00000037589 2121 1.663 0.740 - - - - - - - 0.923 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
43. rbpms2b ENSDARG00000079578 436 1.662 - 0.707 - - - - - - 0.955 RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
44. mgmt ENSDARG00000043275, ENSDARG00000111616 169 1.644 - 0.863 - - - 0.781 - - - O-6-methylguanine-DNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-120614-1]
45. cyp1a ENSDARG00000098315 273 1.622 - 0.823 - - - - 0.799 - - cytochrome P450, family 1, subfamily A [Source:ZFIN;Acc:ZDB-GENE-011219-1]
46. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.618 - - - - - 0.735 - - 0.883 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
47. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.617 - 0.785 - - - - - - 0.832 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
48. pargl ENSDARG00000101719 155 1.609 - - - - - 0.884 0.725 - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
49. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.602 0.823 0.779 - - - - - - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
50. mlxip ENSDARG00000059474 12 1.595 - 0.887 - - - - - 0.708 - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
51. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 1.588 - 0.764 - - - 0.824 - - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
52. ptprjb ptprjb 95 1.585 - 0.836 - - - - 0.749 - -
53. spata6 ENSDARG00000021115 128 1.581 0.750 0.831 - - - - - - - spermatogenesis associated 6 [Source:ZFIN;Acc:ZDB-GENE-050417-351]
54. CABZ01115256.1 CABZ01115256.1 683 1.58 0.741 - - - - 0.839 - - -
55. ddx20 ENSDARG00000061204 477 1.573 - - - - - 0.797 0.776 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-030131-202]
56. CDH16 ENSDARG00000077570 78 1.558 0.837 0.721 - - - - - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
57. si:dkey-192g7.3 ENSDARG00000094012 105 1.547 - - - - - 0.841 0.706 - - si:dkey-192g7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-411]
58. kif15 ENSDARG00000012073 1936 1.542 - - - 0.734 - - - - 0.808 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
59. fbxo8 ENSDARG00000007477 603 1.535 - 0.750 - - - - 0.785 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
60. prcp ENSDARG00000037883 473 1.535 - 0.830 - - - - 0.705 - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
61. MSL1 MSL1 223 1.531 - 0.796 - - - - 0.735 - -
62. suv420h1 1810 1.525 - 0.700 - - - - - - 0.825 suppressor of variegation 4-20 homolog 1 (Drosophila)
63. ccsapb ENSDARG00000040085 784 1.525 0.769 - - - - 0.756 - - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
64. ccdc126 ENSDARG00000062695 861 1.506 0.715 0.791 - - - - - - - coiled-coil domain containing 126 [Source:ZFIN;Acc:ZDB-GENE-060503-11]
65. stab1 ENSDARG00000076484 717 1.502 - 0.771 - - - - 0.731 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
66. SHISA9 SHISA9 154 1.488 - 0.766 - - - - 0.722 - -
67. ddx27 ENSDARG00000091831 1471 1.463 - - - - - 0.761 0.702 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
68. snx5 ENSDARG00000020442 2463 1.445 - 0.717 - - - - - - 0.728 sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
69. FYCO1 FYCO1 194 1.41 0.709 - - - - - 0.701 - -
70. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1 1.000 - - - - - - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
71. lss ENSDARG00000061274 68 1 1.000 - - - - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
72. si:dkey-156k2.6 si:dkey-156k2.6 848 0.993 - - - - - - - - 0.993
73. ptn ENSDARG00000102340 229 0.993 - - - - - - - - 0.993 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
74. flrt1a 107 0.992 - - - - - - - - 0.992 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
75. abcg1 ENSDARG00000063475 97 0.992 - - - - - - - - 0.992 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
76. zgc:173480 171 0.992 - - - - - - - - 0.992 zgc:173480
77. ZNFX1 ENSDARG00000100280 118 0.991 - - - - - - - - 0.991 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
78. ttc21b ENSDARG00000012368 229 0.991 - - - - - - - - 0.991 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
79. CABZ01054405.1 CABZ01054405.1 115 0.991 - - - - - - - - 0.991
80. C16H8orf76 C16H8orf76 329 0.991 - - - - - 0.991 - - -
81. SNAP91 ENSDARG00000098809 556 0.991 - - - - - - - - 0.991 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
82. nupl2 ENSDARG00000029043 105 0.991 - - - - - - - - 0.991 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
83. cables2b ENSDARG00000017154 131 0.991 0.991 - - - - - - - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
84. rxrgb ENSDARG00000004697 332 0.99 - - - - - - - - 0.990 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
85. slc6a6a ENSDARG00000012534 183 0.99 - - - - - - - - 0.990 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
86. PRDM12 PRDM12 133 0.99 - - - - - - - - 0.990
87. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.989 - - - - - - - - 0.989 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
88. KLF8 ENSDARG00000060661 219 0.989 - - - - - - - - 0.989 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
89. si:ch211-279m15.1 si:ch211-279m15.1 67 0.989 0.989 - - - - - - - -
90. CR678040.1 CR678040.1 117 0.989 - - - - - - - - 0.989
91. ncam2 ENSDARG00000017466 175 0.988 - - - - - - - - 0.988 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
92. oraov1 497 0.988 - - - - - - - - 0.988 oral cancer overexpressed 1
93. dkk3b ENSDARG00000070683 209 0.987 - - - - - - - - 0.987 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
94. ltc4s ENSDARG00000062598 138 0.987 - - - - - - - - 0.987 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
95. ror1 ENSDARG00000015176 378 0.987 - - - - - - - - 0.987 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
96. ZFAT ENSDARG00000077987 205 0.987 - - - - - - - - 0.987 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
97. cenpk ENSDARG00000039616 744 0.987 - - - - - - - - 0.987 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
98. gpr143 ENSDARG00000034572 559 0.986 - - - - - - - - 0.986 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
99. prmt6 ENSDARG00000069706 484 0.986 - - - - - - - - 0.986 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
100. AKAP12 AKAP12 140 0.986 - - - - - - - - 0.986

There are 1704 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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