Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for txn2

Gene Name Gene ID Reads Annotation
txn2 ENSDARG00000034777 4071 thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]










Genes with expression patterns similar to txn2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. txn2 ENSDARG00000034777 4071 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
2. ndufa11 ENSDARG00000042777 2757 3.338 - 0.771 - - - 0.993 0.764 0.810 - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
3. myod1 ENSDARG00000030110 6019 3.069 0.715 0.761 - - - - 0.859 - 0.734 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
4. minos1 ENSDARG00000101619 5273 2.997 0.805 0.714 - - - - 0.778 - 0.700 mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
5. phb ENSDARG00000057414 9551 2.645 0.771 - - - - 0.985 0.889 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
6. serpinf1 ENSDARG00000069048 2083 2.637 - 0.837 - - - 0.978 0.822 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
7. pcmt ENSDARG00000015201 5132 2.587 - 0.773 - - - 0.973 0.841 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
8. casq1b ENSDARG00000018105 2643 2.558 - 0.750 - - - 0.978 0.830 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
9. chrnd ENSDARG00000019342 2728 2.529 - 0.747 - - - 0.987 0.795 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
10. ryr1b ENSDARG00000023797 5693 2.498 - 0.759 - - - 0.923 0.816 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
11. MYOM3 2720 2.491 0.894 0.738 - - - - 0.859 - - myomesin 3, transcript variant X2
12. usp28 ENSDARG00000008880 1850 2.487 - 0.711 - - - 0.982 0.794 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
13. nars ENSDARG00000061100 2948 2.484 0.825 0.808 - - - - 0.851 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
14. klhl41a ENSDARG00000068888 1034 2.432 0.720 0.730 - - - 0.982 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
15. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.391 0.712 0.878 - - - - 0.801 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
16. atp5e 14858 2.379 0.771 - - - - - 0.871 - 0.737 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
17. vwde ENSDARG00000103443 5758 2.359 0.825 0.796 - - - - 0.738 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
18. fitm1 ENSDARG00000056464 1759 2.358 0.713 0.803 - - - - 0.842 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
19. hapln1a ENSDARG00000089769 12334 2.343 0.744 0.774 - - - - 0.825 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
20. C13H10orf71 3489 2.332 0.753 0.794 - - - - 0.785 - - chromosome 13 C10orf71 homolog
21. chrna1 ENSDARG00000009021 2931 2.316 0.725 0.764 - - - - 0.827 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
22. cd248b ENSDARG00000077938 2561 2.315 0.713 0.791 - - - - 0.811 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
23. tgm1l1 ENSDARG00000102106 1437 2.309 - 0.714 - - - - 0.788 0.807 - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
24. mybphb ENSDARG00000003081 5208 2.301 - 0.779 0.701 - - - 0.821 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
25. klhl41b ENSDARG00000006757 10762 2.298 0.711 - - - - - 0.833 0.754 - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
26. tns1 tns1 5891 2.291 0.742 0.705 - - - - 0.844 - -
27. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.278 0.752 0.807 - - - - 0.719 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
28. sh3bgr ENSDARG00000021633 3498 2.276 0.747 0.725 - - - - 0.804 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
29. sms ENSDARG00000008155 1192 2.265 - 0.731 - - - - 0.770 0.764 - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
30. apex1 ENSDARG00000045843 6345 2.26 0.707 0.786 - - - - 0.767 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
31. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 2.26 0.732 0.733 - - - - 0.795 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
32. si:ch1073-325m22.2 ENSDARG00000095921 8534 2.256 - 0.722 - - - - 0.797 - 0.737 si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
33. si:ch211-242b18.1 ENSDARG00000054723 2929 2.234 - 0.773 - - - - 0.733 0.728 - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
34. hfe2 4113 2.225 0.740 0.762 - - - - - 0.723 - hemochromatosis type 2
35. EEF1E1 ENSDARG00000071774 3806 2.208 0.706 0.734 - - - - 0.768 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
36. zgc:153662 zgc:153662 4604 2.159 0.707 0.704 - - - - 0.748 - -
37. MRPL21 ENSDARG00000003846 3244 2.141 0.711 0.722 - - - - 0.708 - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
38. pes ENSDARG00000018902 3286 1.846 - 0.863 - - - 0.983 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
39. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 1.829 - - - - - 0.982 0.847 - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
40. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.8 - - - - - 0.983 0.817 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
41. CASKIN2_1 CASKIN2_1 2299 1.794 - 0.812 - - - 0.982 - - -
42. mt-nd5 ENSDARG00000063921 21268 1.787 - - - - - 0.905 0.882 - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
43. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.782 - - - - - 0.974 0.808 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
44. stxbp3 ENSDARG00000008142 2604 1.777 - - - - - 0.988 0.789 - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
45. BX324201.1 BX324201.1 3302 1.776 - - - - - 0.965 0.811 - -
46. PLEKHG4 ENSDARG00000075964 2860 1.776 - - - - - 0.984 0.792 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
47. ndufv2 ENSDARG00000013044 3758 1.776 - - - - - 0.983 0.793 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
48. sf3b4 ENSDARG00000018574 7470 1.767 - 0.785 - - - 0.982 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
49. lap3 ENSDARG00000061981 1188 1.76 - 0.775 - - - 0.985 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
50. PSIP1 PSIP1 5252 1.753 - - - - - 0.989 0.764 - -
51. plagx ENSDARG00000036855 3768 1.752 - - - - - 0.979 0.773 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
52. hypk ENSDARG00000059725 20584 1.749 - - - - - 0.902 0.847 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
53. lamb2 ENSDARG00000002084 3265 1.741 0.748 - - - - 0.993 - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
54. uggt1 ENSDARG00000054746 2060 1.74 - 0.757 - - - 0.983 - - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
55. pgp ENSDARG00000029695, ENSDARG00000114512 829 1.728 - 0.838 - - - - 0.890 - - phosphoglycolate phosphatase [Source:ZFIN;Acc:ZDB-GENE-030131-6240]
56. psmb4 ENSDARG00000054696 8100 1.718 - - - - - 0.991 0.727 - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
57. hdac9b ENSDARG00000056642 1148 1.713 - - - - - 0.986 0.727 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
58. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.705 - - - - - 0.889 0.816 - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
59. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.703 - 0.863 - - - - 0.840 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
60. imp4 ENSDARG00000054540 1396 1.697 - 0.708 - - - 0.989 - - - IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
61. rhebl1 ENSDARG00000039162 3966 1.694 - - - - - 0.986 0.708 - - Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
62. rab5if ENSDARG00000074790 8807 1.69 - 0.812 - - - - 0.878 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
63. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.684 0.779 - - - - - 0.905 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
64. mrpl41 ENSDARG00000002264 1756 1.683 - 0.700 - - - 0.983 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
65. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.681 - - - - - 0.957 0.724 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
66. mars ENSDARG00000034396 3618 1.678 - 0.886 - - - - 0.792 - - methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
67. ATP5J_2 ATP5J_2 2381 1.678 - 0.819 - - - - 0.859 - -
68. agla ENSDARG00000103811 2856 1.675 - - - - - - 0.847 0.828 - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
69. limch1a ENSDARG00000074275 2981 1.673 - 0.810 - - - - 0.863 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
70. timm8b ENSDARG00000055708 7291 1.672 - 0.760 - - - - 0.912 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
71. snrpc ENSDARG00000009871 9567 1.671 - - - - - 0.957 0.714 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
72. pygmb ENSDARG00000013317 5454 1.67 - 0.774 - - - - 0.896 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
73. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.67 - - - - - 0.778 0.892 - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
74. pdhb ENSDARG00000021346 9088 1.664 - - - - - 0.923 0.741 - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
75. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.664 - 0.847 - - - - 0.817 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
76. nudt3a ENSDARG00000016256 2713 1.664 - 0.828 - - - - 0.836 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
77. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.663 - 0.785 - - - - 0.878 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
78. mrps9 ENSDARG00000061505 1636 1.653 - 0.851 - - - - 0.802 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
79. ITGB1BP2 ENSDARG00000030176 2472 1.652 - 0.785 - - - - 0.867 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
80. sptb ENSDARG00000030490 7128 1.646 - 0.842 - - - - 0.804 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
81. srpk3 ENSDARG00000005916 1546 1.644 - 0.782 - - - - 0.862 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
82. cap2 ENSDARG00000104478 3266 1.643 - 0.815 - - - - 0.828 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
83. desi2 ENSDARG00000004460 1593 1.642 - 0.793 - - - - 0.849 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
84. pbxip1a ENSDARG00000071015 4960 1.639 - 0.794 - - - - 0.845 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
85. PHB2 PHB2 3755 1.638 - 0.770 - - - - 0.868 - -
86. DNAJA4 ENSDARG00000051762 5657 1.637 - 0.862 - - - - 0.775 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
87. C1QBP ENSDARG00000039887 11186 1.635 0.789 - - - - - 0.846 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
88. ddx49 ENSDARG00000012899 1604 1.634 - 0.797 - - - - 0.837 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
89. pomp ENSDARG00000032296 4439 1.631 - 0.888 - - - - 0.743 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
90. marcksl1a ENSDARG00000039034 37303 1.628 0.729 - - - - 0.899 - - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
91. mrps15 ENSDARG00000109289 3258 1.627 - 0.782 - - - - 0.845 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
92. klhl21 ENSDARG00000039255 2550 1.626 - 0.761 - - - - 0.865 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
93. mdh2 ENSDARG00000043371 14485 1.626 0.708 - - - - - 0.918 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
94. ntmt1 ENSDARG00000022399 5779 1.624 - 0.785 - - - - 0.839 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
95. setd3 ENSDARG00000016513 1507 1.623 - 0.803 - - - - 0.820 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
96. dyrk2 ENSDARG00000094646 2163 1.622 - 0.819 - - - - 0.803 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
97. MRPL52 ENSDARG00000090568 4402 1.621 - 0.758 - - - - 0.863 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
98. BCKDHB ENSDARG00000014676 3725 1.62 - 0.817 - - - - 0.803 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
99. rpf2 ENSDARG00000043960 2719 1.618 0.763 0.855 - - - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
100. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.618 0.738 - - - - - 0.880 - - aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]

There are 1657 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA