Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ttr

Gene Name Gene ID Reads Annotation
ttr ENSDARG00000037191 11 transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]










Genes with expression patterns similar to ttr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ttr ENSDARG00000037191 11 7 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
2. DPYSL2 DPYSL2 4 2 1.000 - - - - 1.000 - - -
3. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1.969 1.000 - - 0.969 - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
4. TRHDE_1 TRHDE_1 102 1.949 - - - - 0.953 - 0.996 - -
5. sybu ENSDARG00000060112 22 1.928 - - 1.000 0.928 - - - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
6. abca4a ENSDARG00000057169 27 1.896 1.000 - 0.896 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
7. si:ch211-284o19.8 ENSDARG00000053836 43 1.887 - - - - 0.889 - 0.998 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
8. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1.876 1.000 - - - 0.876 - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
9. mybpc2a ENSDARG00000030157 11 1.861 0.861 - - - - 1.000 - - - myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
10. bmpr1ab ENSDARG00000105045 2 1.843 - - 1.000 - - - - 0.843 - bone morphogenetic protein receptor, type IAb [Source:ZFIN;Acc:ZDB-GENE-040912-150]
11. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.842 1.000 - - - - - 0.842 - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
12. anxa2b ENSDARG00000053625, ENSDARG00000116775, ENSDARG00000117092 55 1.838 - - 1.000 - - 0.838 - - - annexin A2b [Source:ZFIN;Acc:ZDB-GENE-030131-1089]
13. zgc:158852 ENSDARG00000102076 65 1.834 0.917 - - - - - 0.917 - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
14. tshb tshb 7 1.768 - - - - - 1.000 - 0.768 -
15. SIPA1L3 ENSDARG00000061699 268 1.685 0.821 - - - - - 0.864 - - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
16. C5H9orf172 C5H9orf172 65 1.676 0.975 - - - 0.701 - - - -
17. ccdc127b ENSDARG00000008946 141 1.608 0.767 - - - - - 0.841 - - coiled-coil domain containing 127b [Source:ZFIN;Acc:ZDB-GENE-060503-656]
18. adal ENSDARG00000012986, ENSDARG00000111306 77 1.595 0.805 - - - - 0.790 - - - adenosine deaminase-like [Source:ZFIN;Acc:ZDB-GENE-050913-145]
19. abcb10 ENSDARG00000061591 253 1.583 - - - - - 0.762 0.821 - - ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:ZFIN;Acc:ZDB-GENE-040525-2]
20. ANKS3 ENSDARG00000038557 235 1.574 - - - - - 0.761 0.813 - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080204-51]
21. zgc:173962 zgc:173962 67 1.567 - - - 0.730 - 0.837 - - -
22. tmem179b ENSDARG00000069495 17 1.566 - - - - 0.805 - - 0.761 - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
23. iqsec2 iqsec2 304 1.531 - - - - 0.804 - 0.727 - -
24. si:ch73-381a20.2 si:ch73-381a20.2 11 1.47 - - - - 0.748 - - 0.722 -
25. OTOG ENSDARG00000068460 60 1 1.000 - - - - - - - - otogelin [Source:ZFIN;Acc:ZDB-GENE-120228-1]
26. trim62 ENSDARG00000060901 12 1 - - - - - - 1.000 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
27. si:dkey-22l1.1 ENSDARG00000096743 5 1 - - 1.000 - - - - - - si:dkey-22l1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-74]
28. ACTR3_1 ACTR3_1 2 1 - - 1.000 - - - - - -
29. KCNJ15 ENSDARG00000058988 18 1 - - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
30. spire2 ENSDARG00000003084 6 1 1.000 - - - - - - - - spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]
31. MFRP MFRP 6 1 - - - - - 1.000 - - -
32. mstna ENSDARG00000042947 1 1 - - - - - 1.000 - - - myostatin a [Source:ZFIN;Acc:ZDB-GENE-050208-735]
33. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 1.000 - - - - - - - -
34. si:ch73-27e22.5 si:ch73-27e22.5 10 1 1.000 - - - - - - - -
35. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 1.000 - - - - - - - -
36. akap1a ENSDARG00000089802 5 1 - - - - - 1.000 - - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
37. LAMC2 ENSDARG00000068288 37 1 - - - - - - 1.000 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
38. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 - - - - - 1.000 - - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
39. GPR82 GPR82 127 1 - - - - - 1.000 - - -
40. fermt3b ENSDARG00000030938 17 1 - - - - - 1.000 - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
41. zgc:174224 ENSDARG00000093875 4 1 - - 1.000 - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
42. FAM185A ENSDARG00000019142 3 1 - - - 1.000 - - - - - family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
43. MICALCL MICALCL 1 1 - - 1.000 - - - - - -
44. CT737138.1 CT737138.1 26 1 - - 1.000 - - - - - -
45. BX629350.1 BX629350.1 1 1 - - 1.000 - - - - - -
46. pls1 ENSDARG00000039272 39 1 - - 1.000 - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
47. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1 1.000 - - - - - - - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
48. zgc:162962 ENSDARG00000116765 29 1 1.000 - - - - - - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
49. pde6b ENSDARG00000011671 44 1 - - - - - 1.000 - - - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
50. igf3 ENSDARG00000058058 19 1 - - - - - 1.000 - - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
51. pofut2 ENSDARG00000045175 6 1 1.000 - - - - - - - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
52. SCN1B SCN1B 191 1 1.000 - - - - - - - -
53. MFAP4_7 MFAP4_7 43 1 - - - - - 1.000 - - -
54. BX324215.3 BX324215.3 12 1 - - - - - 1.000 - - -
55. itga11b ENSDARG00000007950 17 1 - - - - - 1.000 - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
56. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - 1.000 - - - - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
57. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1 - - - - - 1.000 - - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
58. MPPED1 ENSDARG00000088181 117 1 - - - - - - 1.000 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
59. rad9b ENSDARG00000075632 1 1 - - 1.000 - - - - - - RAD9 checkpoint clamp component B [Source:ZFIN;Acc:ZDB-GENE-040910-3]
60. CABZ01033130.1 CABZ01033130.1 5 1 1.000 - - - - - - - -
61. si:dkey-46g23.2 ENSDARG00000115817 11 1 - - - - - 1.000 - - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
62. ctgfb ENSDARG00000104292 69 1 - - - - - - 1.000 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
63. DYDC2 ENSDARG00000101848 2 1 - - - - - 1.000 - - - DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
64. si:dkey-203c4.2 si:dkey-203c4.2 4 1 1.000 - - - - - - - -
65. polr3b ENSDARG00000062915, ENSDARG00000113895 144 1 - - - - - 1.000 - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
66. dmrt1 ENSDARG00000007349 16 1 - - - 1.000 - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
67. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - 1.000 - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
68. cdca9 ENSDARG00000088639, ENSDARG00000113114 3 1 - - - 1.000 - - - - - cell division cycle associated 9 [Source:ZFIN;Acc:ZDB-GENE-090706-4]
69. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 - - - - - - 1.000 - -
70. SMARCAD1 SMARCAD1 104 1 1.000 - - - - - - - -
71. mif4gdb ENSDARG00000102578 31 1 - - - - - 1.000 - - - MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
72. KSR1 KSR1 8 1 - - - - - 1.000 - - -
73. si:dkey-57k2.6 ENSDARG00000095608 14 1 - - - - - 1.000 - - - si:dkey-57k2.6 [Source:ZFIN;Acc:ZDB-GENE-070912-558]
74. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - - - 1.000 - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
75. si:ch211-240l19.5 ENSDARG00000039393, ENSDARG00000117050 23 1 - - - 1.000 - - - - - si:ch211-240l19.5 [Source:ZFIN;Acc:ZDB-GENE-041210-327]
76. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
77. CST7 CST7 22 1 - - - - - 1.000 - - -
78. dao.3 ENSDARG00000035601 15 1 - - - - - 1.000 - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
79. bckdhb ENSDARG00000014676 17 1 - - - - - 1.000 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
80. si:ch211-149o7.4 si:ch211-149o7.4 1 1 - - 1.000 - - - - - -
81. col17a1a ENSDARG00000069415 52 1 1.000 - - - - - - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
82. col17a1b ENSDARG00000079011 143 1 1.000 - - - - - - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
83. SLC38A9 ENSDARG00000032769 35 1 - - - - - - 1.000 - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
84. AL935186.2 ENSDARG00000097345 6 1 - - 1.000 - - - - - -
85. ptpn18 ENSDARG00000006308 7 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 18 [Source:ZFIN;Acc:ZDB-GENE-050320-12]
86. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1 - - - - - 1.000 - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
87. bon bon 20 1 1.000 - - - - - - - -
88. cyp2k19 ENSDARG00000101861 129 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1]
89. gtf3c2 ENSDARG00000004574 153 1 - - - - - 1.000 - - - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
90. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - - 1.000 - -
91. KLF10 1 1 - - 1.000 - - - - - - Kruppel-like factor 10
92. ZNF135_4 ZNF135_4 3 1 - - - - - 1.000 - - -
93. or109-1 ENSDARG00000105796 1 1 - - - 1.000 - - - - - odorant receptor, family D, subfamily 109, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-67]
94. ak7b ENSDARG00000017023 25 1 1.000 - - - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
95. si:ch211-196c10.11 si:ch211-196c10.11 2 1 1.000 - - - - - - - -
96. adgra1a ENSDARG00000054177 19 1 - - - - - 1.000 - - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
97. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - - - - 1.000 - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
98. hmha1 hmha1 58 1 1.000 - - - - - - - -
99. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1 - - - - - 1.000 - - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
100. CABZ01066695.1 CABZ01066695.1 12 1 1.000 - - - - - - - -

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA