Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tspan3b

Gene Name Gene ID Reads Annotation
tspan3b ENSDARG00000053559, ENSDARG00000112641 118 tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]










Genes with expression patterns similar to tspan3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
2. NPAS3 ENSDARG00000109820 362 2.725 - 1.000 - - - 0.855 - 0.870 - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
3. SPTBN4_1 ENSDARG00000092624 473 2.609 0.824 - - - - 0.926 0.859 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
4. zbtb20 ENSDARG00000005586 195 2.576 0.831 1.000 - - - 0.745 - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
5. pou3f2a ENSDARG00000070220 817 2.522 0.842 - - - - 0.911 0.769 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
6. syngr3a ENSDARG00000014871 405 2.501 - 0.806 - - - 0.969 0.726 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
7. CHRNB4 ENSDARG00000101677 128 2.445 0.718 0.946 - - - 0.781 - - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
8. nes ENSDARG00000088805 2710 2.407 0.769 0.770 - - - 0.868 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
9. CHL1 CHL1 1553 2.315 0.711 0.723 - - - 0.881 - - -
10. flrt1b ENSDARG00000075597 465 2.315 0.889 - - - - 0.712 0.714 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
11. nova2 ENSDARG00000017673 7685 2.308 0.706 0.708 - - - 0.894 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
12. b4galt2 ENSDARG00000077994 480 2.182 0.734 - - - - 0.735 - 0.713 - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
13. foxq1a ENSDARG00000030896 121 2 - 1.000 - - - - 1.000 - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
14. htr3a ENSDARG00000089212 51 1.939 - 1.000 - - - - - 0.939 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
15. nebl ENSDARG00000021200 40 1.938 - 1.000 - - - - - 0.938 - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
16. sox12 ENSDARG00000025847 681 1.934 - 1.000 - - - - 0.934 - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
17. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1.914 - 1.000 - - - 0.914 - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
18. GJD2_1 GJD2_1 3045 1.907 - 1.000 - - - 0.907 - - -
19. NPPC ENSDARG00000068126 45 1.898 0.898 1.000 - - - - - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
20. syt11b ENSDARG00000056105 578 1.875 - 0.974 - - - 0.901 - - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
21. tmem179 ENSDARG00000013292 343 1.874 - 0.946 - - - 0.928 - - - transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
22. neflb ENSDARG00000012426 298 1.871 - 1.000 - - - 0.871 - - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
23. ptf1a ENSDARG00000014479 349 1.862 - 1.000 - - - 0.862 - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
24. cacng3b ENSDARG00000076401 91 1.857 - 1.000 - - - 0.857 - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
25. CT025910.1 CT025910.1 143 1.846 0.846 1.000 - - - - - - -
26. gng3 ENSDARG00000009553 2530 1.846 - 0.929 - - - 0.917 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
27. CU179656.1 ENSDARG00000107086 270 1.84 - 0.969 - - - 0.871 - - -
28. EGR4 ENSDARG00000077799 34 1.837 - - - - - 0.970 0.867 - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
29. penka ENSDARG00000004869 161 1.837 - 0.991 - - - 0.846 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
30. gnb5b ENSDARG00000055377 98 1.833 - 0.898 - - - - - 0.935 - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
31. porcn ENSDARG00000052558, ENSDARG00000111556 110 1.832 - 1.000 - - - 0.832 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
32. si:ch73-127m5.1 ENSDARG00000060680 253 1.826 - 1.000 - - - 0.826 - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
33. cdh10 cdh10 38 1.823 - 1.000 - - - - 0.823 - -
34. prdm14 ENSDARG00000045371 106 1.822 - 1.000 - - - 0.822 - - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
35. zic6 ENSDARG00000071496 402 1.817 - 0.907 - - - 0.910 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
36. khdrbs2 ENSDARG00000069469 160 1.815 - 1.000 - - - 0.815 - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
37. otpb ENSDARG00000058379 1143 1.809 - 1.000 - - - 0.809 - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
38. syt11a ENSDARG00000057913 1145 1.809 - 0.902 - - - - - 0.907 - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
39. scn2b ENSDARG00000101713 796 1.807 - 0.909 - - - 0.898 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
40. fam219ab ENSDARG00000013813 591 1.804 - 1.000 - - - 0.804 - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
41. si:dkeyp-79c2.1 42 1.798 - 1.000 - - - - 0.798 - - si:dkeyp-79c2.1, transcript variant X2
42. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.785 0.865 - - - - 0.920 - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
43. odz4 odz4 822 1.78 - - - - - 0.874 0.906 - -
44. si:ch211-152f6.6 si:ch211-152f6.6 278 1.779 - 0.946 - - - 0.833 - - -
45. C18H15orf59 C18H15orf59 80 1.776 - 1.000 - - - 0.776 - - -
46. AGAP2 ENSDARG00000099874 151 1.775 - 1.000 - - - 0.775 - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
47. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.768 - 1.000 - - - 0.768 - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
48. DKK3 DKK3 12 1.766 0.766 1.000 - - - - - - -
49. KCNS3 KCNS3 82 1.763 - 1.000 - - - - 0.763 - -
50. CABZ01028287.1 CABZ01028287.1 626 1.757 0.897 - - - - 0.860 - - -
51. atp6v0a1b ENSDARG00000015174 1052 1.755 - - - - - 0.935 0.820 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
52. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 1.754 - - - - - 0.862 0.892 - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
53. tekt1 ENSDARG00000101331 27 1.753 - 1.000 - - - - 0.753 - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
54. lhx1a ENSDARG00000014018 958 1.75 - 0.903 - - - 0.847 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
55. BX511121.1 ENSDARG00000029997 1774 1.747 0.836 - - - - 0.911 - - -
56. dbx2 2971 1.742 - 0.781 - - - 0.961 - - - developing brain homeobox 2
57. slc17a6b ENSDARG00000041150 823 1.735 - 1.000 - - - - 0.735 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
58. lzts3b ENSDARG00000058558 166 1.733 - - - - - 0.947 0.786 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
59. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.731 - - - - - 0.907 0.824 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
60. chat chat 463 1.728 0.910 - - - - 0.818 - - -
61. ANK1_1 ANK1_1 507 1.726 - - - - - 0.916 0.810 - -
62. si:dkey-19f21.8 si:dkey-19f21.8 12 1.725 - 1.000 - - - 0.725 - - -
63. CU914780.1 ENSDARG00000114023 105 1.725 - 1.000 - - - 0.725 - - -
64. rbfox3 rbfox3 1443 1.722 - 0.833 - - - 0.889 - - -
65. jph3 ENSDARG00000102204 175 1.721 - 1.000 - - - 0.721 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
66. nhlh2 ENSDARG00000025495 1860 1.721 0.781 - - - - 0.940 - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
67. ZBTB26 ENSDARG00000028949 129 1.721 - 0.971 - - - 0.750 - - - zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:HGNC:23383]
68. mapre3a ENSDARG00000020231 100 1.716 - - - - - 0.716 1.000 - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
69. tagln3a ENSDARG00000079805 123 1.715 - 1.000 - - - 0.715 - - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
70. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1.711 - 1.000 - - - 0.711 - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
71. pkd2l1 ENSDARG00000022503 372 1.71 0.809 0.901 - - - - - - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
72. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.709 - 1.000 - - - 0.709 - - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
73. apba1b ENSDARG00000074328 254 1.707 - - - - - 0.848 0.859 - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
74. srgap2b srgap2b 80 1.705 0.907 - - - - - 0.798 - -
75. PRKAR2B ENSDARG00000036446 812 1.704 0.790 - - - - 0.914 - - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
76. CT573433.2 CT573433.2 115 1.704 - 1.000 - - - 0.704 - - -
77. st8sia1_1 ENSDARG00000098221 16 1.7 - 1.000 - - - - 0.700 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
78. tmie ENSDARG00000069423 305 1.693 0.781 - - - - 0.912 - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
79. CDK5R1 CDK5R1 562 1.692 0.845 - - - - 0.847 - - -
80. fyna ENSDARG00000011370 1679 1.687 0.812 - - - - 0.875 - - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
81. magi1a ENSDARG00000070145 547 1.686 - - - - - 0.889 - 0.797 - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
82. lin7b ENSDARG00000037932 150 1.683 - - - - - 0.801 0.882 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
83. si:ch211-247j9.1 ENSDARG00000079283 217 1.683 0.871 - - - - 0.812 - - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
84. cdk5r1b ENSDARG00000045087 2075 1.683 - - - - - 0.921 - 0.762 - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
85. lgi2a ENSDARG00000111069 965 1.682 - 0.743 - - - 0.939 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
86. nrsn1 ENSDARG00000111235 123 1.679 0.766 0.913 - - - - - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
87. KCNB2 ENSDARG00000088842 35 1.671 - 0.806 - - - 0.865 - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
88. draxin ENSDARG00000058256, ENSDARG00000111676 266 1.67 - 0.783 - - - 0.887 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
89. si:dkey-193c22.1 ENSDARG00000093687 104 1.666 - - - - - 0.798 - 0.868 - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
90. clstn3 ENSDARG00000073883 590 1.664 0.747 - - - - 0.917 - - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
91. MCTP1 MCTP1 219 1.662 - 0.881 - - - 0.781 - - -
92. gad2 ENSDARG00000015537 724 1.662 0.832 0.830 - - - - - - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
93. vim ENSDARG00000010008 3551 1.659 0.821 - - - - 0.838 - - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
94. stx1b ENSDARG00000000503 2724 1.655 - 0.814 - - - 0.841 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
95. si:ch211-14c7.2 ENSDARG00000094522 369 1.653 - 0.893 - - - - 0.760 - - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
96. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.651 - - - - - 0.876 0.775 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
97. nrxn2a ENSDARG00000061454 291 1.649 - 0.881 - - - - 0.768 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
98. st3gal2 ENSDARG00000112898 370 1.648 - 0.742 - - - 0.906 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
99. si:dkey-122c11.9 si:dkey-122c11.9 227 1.648 - - - - - 0.715 - 0.933 -
100. TRIM67 ENSDARG00000108787 290 1.643 - - - - - 0.885 0.758 - - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]

There are 1595 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA