Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trpa1a

Gene Name Gene ID Reads Annotation
trpa1a ENSDARG00000016699 43 transient receptor potential cation channel, subfamily A, member 1a [Source:ZFIN;Acc:ZDB-GENE-050105-6]










Genes with expression patterns similar to trpa1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpa1a ENSDARG00000016699 43 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transient receptor potential cation channel, subfamily A, member 1a [Source:ZFIN;Acc:ZDB-GENE-050105-6]
2. C25H12orf29 C25H12orf29 31 2.45 - 0.769 - - - - 0.939 - 0.742
3. GABRR1 ENSDARG00000043902 71 2.384 - 0.769 - - - 0.752 0.863 - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
4. slc44a1a ENSDARG00000015946 10 1.954 - - 1.000 - - 0.954 - - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
5. ATP13A5 ATP13A5 13 1.939 - - - - - - 0.939 1.000 -
6. ppp2r3a ENSDARG00000077722 7 1.862 - - - - - 0.923 0.939 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
7. SNORD10 SNORD10 71 1.846 - 0.892 - - - 0.954 - - -
8. lrrc18b ENSDARG00000076236 5 1.828 - - 1.000 - - - 0.828 - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
9. CR854923.1 CR854923.1 18 1.811 - - - - - 0.915 0.896 - -
10. commd9 ENSDARG00000094258, ENSDARG00000111031 49 1.808 - - - - - 0.959 - - 0.849 COMM domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070424-139]
11. aspdh ENSDARG00000038297 39 1.805 - 0.882 - - - - 0.923 - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
12. ca10b ENSDARG00000009568 8 1.799 - - - - - 0.954 0.845 - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
13. oxgr1a.1 ENSDARG00000033684 24 1.798 - - - - - 0.908 - 0.890 - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
14. UFSP1 ENSDARG00000061610 81 1.793 - 0.870 - - - 0.923 - - - UFM1-specific peptidase 1 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-070410-124]
15. BX000701.3 BX000701.3 4 1.769 - 0.769 1.000 - - - - - -
16. lzts2b ENSDARG00000077207 22 1.765 - - - - - - 0.939 0.826 - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
17. zgc:173837 ENSDARG00000076949 24 1.729 - 0.769 - - - - 0.960 - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
18. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1.724 - 0.724 1.000 - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
19. CR847504.1 ENSDARG00000102515 29 1.722 - - - - - 0.826 0.896 - -
20. adam8b ENSDARG00000057644 108 1.716 - - - - - 0.872 0.844 - - ADAM metallopeptidase domain 8b [Source:ZFIN;Acc:ZDB-GENE-070808-1]
21. CR933820.2 CR933820.2 152 1.7 - 0.769 - - - 0.931 - - -
22. si:dkey-6a5.10 si:dkey-6a5.10 17 1.696 - 0.769 - 0.927 - - - - -
23. tnni3k ENSDARG00000086933 37 1.679 - 0.769 - - - 0.910 - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
24. clcn1a ENSDARG00000062084 120 1.675 - 0.769 0.906 - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
25. CAMKV CAMKV 11 1.672 - - 0.743 - - 0.929 - - -
26. irf4a ENSDARG00000006560 4 1.655 - - - - - - 0.854 - 0.801 interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
27. npffr1l3 ENSDARG00000010712 18 1.649 0.710 - - - - - 0.939 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
28. cpne5a ENSDARG00000061466, ENSDARG00000111461 105 1.629 - 0.769 - - - - 0.860 - - copine Va [Source:ZFIN;Acc:ZDB-GENE-081105-9]
29. CABZ01112210.1 CABZ01112210.1 48 1.629 0.806 0.823 - - - - - - -
30. klf6b ENSDARG00000038561 27 1.627 - - 0.800 - - - - 0.827 - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
31. rnf41l ENSDARG00000073918 329 1.608 - - - - - 0.855 - 0.753 - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
32. coro6 ENSDARG00000102272 76 1.599 - 0.800 - - - 0.799 - - - coronin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1202]
33. fancf ENSDARG00000019250 111 1.596 - 0.769 - - - - 0.827 - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
34. si:dkey-111b14.2 si:dkey-111b14.2 25 1.585 0.765 0.820 - - - - - - -
35. FAM98C FAM98C 225 1.571 - - - - - 0.806 0.765 - -
36. C21H11orf82 C21H11orf82 50 1.567 - 0.769 - - - - 0.798 - -
37. FP085391.2 FP085391.2 85 1.567 - 0.769 - - - - 0.798 - -
38. si:ch1073-170o4.1 ENSDARG00000092780 18 1.561 - 0.769 - - - - - - 0.792 si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
39. NLRC5 ENSDARG00000024631 11 1.557 - 0.769 - - - - 0.788 - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
40. elfn1b ENSDARG00000074372 25 1.501 - 0.769 - - - - - 0.732 - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
41. slc12a2 ENSDARG00000104573 59 1.499 - 0.769 - - - 0.730 - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
42. EMC7 ENSDARG00000012144 76 1.498 - 0.709 - - - 0.789 - - - ER membrane protein complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-041001-170]
43. tdrd7 tdrd7 31 1.485 0.710 - - - - - 0.775 - -
44. DYNC1H1 ENSDARG00000014717 11 1.479 0.710 0.769 - - - - - - - dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
45. ubxn10 ENSDARG00000052535 24 1.462 - 0.709 - - - - 0.753 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
46. SLC7A1 ENSDARG00000016439, ENSDARG00000115084 54 1.459 - 0.715 - - - - - 0.744 - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
47. npr1b ENSDARG00000018750 174 1.436 - 0.709 - - - - 0.727 - - natriuretic peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-100805-4]
48. PEG3_2 PEG3_2 468 1.42 - 0.713 - - - - 0.707 - -
49. SECISBP2L 1 1 - - 1.000 - - - - - - SECIS binding protein 2-like
50. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - - - - - 1.000 - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
51. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - 1.000 - - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
52. si:dkey-1h24.6 ENSDARG00000092653 13 1 - - 1.000 - - - - - - si:dkey-1h24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-103]
53. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - - - 1.000 - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
54. phlpp2 ENSDARG00000090255 1 1 - - 1.000 - - - - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
55. aqp9b ENSDARG00000053480 16 1 - - 1.000 - - - - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
56. U1_42 U1_42 0 1 - - 1.000 - - - - - -
57. CD97_2 CD97_2 15 1 - - 1.000 - - - - - -
58. BX248324.1 ENSDARG00000096489 3 1 - - 1.000 - - - - - -
59. faah2b ENSDARG00000054786, ENSDARG00000112726 10 1 - - 1.000 - - - - - - fatty acid amide hydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061027-358]
60. CABZ01112732.1 ENSDARG00000068453 4 1 - - 1.000 - - - - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
61. CR391977.3 CR391977.3 76 1 - - - - - - 1.000 - -
62. BX119910.15 BX119910.15 4 1 - - 1.000 - - - - - -
63. hcn3 ENSDARG00000027192 6 1 - - 1.000 - - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
64. CABZ01085626.1 ENSDARG00000117294 8 1 - - 1.000 - - - - - -
65. NUMA1_3 NUMA1_3 5 1 - - - - - - - 1.000 -
66. si:ch211-161f1.3 si:ch211-161f1.3 0 1 - - 1.000 - - - - - -
67. col10a1 col10a1 19 1 - - 1.000 - - - - - -
68. si:dkey-3n22.9 ENSDARG00000096273 1 1 - - 1.000 - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
69. si:dkey-247i3.1 ENSDARG00000076252 11 1 - - - - - - - 1.000 - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
70. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - 1.000 - - - - - -
71. zgc:162971 ENSDARG00000101093 1 1 - - - - - - - 1.000 - zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
72. si:dkey-56m15.2 ENSDARG00000101469 0 1 - - 1.000 - - - - - - si:dkey-56m15.2 [Source:ZFIN;Acc:ZDB-GENE-110913-122]
73. CABZ01080134.1 CABZ01080134.1 2 1 - - 1.000 - - - - - -
74. SNORA21_1 SNORA21_1 0 1 - - 1.000 - - - - - -
75. zgc:114037_1 10 1 - - 1.000 - - - - - - zgc:114037
76. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - 1.000 - - - - - - si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
77. gltpb ENSDARG00000077962 5 1 - - 1.000 - - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
78. CYP11A1 ENSDARG00000002347, ENSDARG00000111941 12 1 - - 1.000 - - - - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
79. SOX8 SOX8 22 1 - - 1.000 - - - - - -
80. si:dkey-30g5.4 si:dkey-30g5.4 0 1 - - 1.000 - - - - - -
81. crygm2d11 ENSDARG00000069827 1 1 - - 1.000 - - - - - - crystallin, gamma M2d11 [Source:ZFIN;Acc:ZDB-GENE-071004-42]
82. MTR ENSDARG00000104906 0 1 - - 1.000 - - - - - - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-031001-5]
83. AL929192.3 AL929192.3 4 1 - - 1.000 - - - - - -
84. CR853287.1 CR853287.1 6 1 - - - - - - - 1.000 -
85. Mar-11 Mar-11 5 1 - - - - - - - 1.000 -
86. si:dkey-233e3.6 si:dkey-233e3.6 1 1 - - 1.000 - - - - - -
87. or132-2 ENSDARG00000094515, ENSDARG00000105762 1 1 - - - - - - - 1.000 - odorant receptor, family H, subfamily 132, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-48]
88. CCDC180 ENSDARG00000032372 21 1 - - 1.000 - - - - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
89. snai3 ENSDARG00000031243 31 1 - - - - - - - 1.000 - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
90. si:dkey-31n13.4 ENSDARG00000101312 1 1 - - 1.000 - - - - - - si:dkey-31n13.4 [Source:ZFIN;Acc:ZDB-GENE-071008-3]
91. gda ENSDARG00000002986 9 1 - - 1.000 - - - - - - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
92. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - 1.000 - - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
93. CT027623.1 ENSDARG00000094538 13 1 - - 1.000 - - - - - - si:dkey-65l23.1 [Source:NCBI gene;Acc:101885466]
94. si:dkey-56m15.8 ENSDARG00000098426 2 1 - - 1.000 - - - - - - si:dkey-56m15.8 [Source:ZFIN;Acc:ZDB-GENE-110914-109]
95. NETO2_1 NETO2_1 15 1 - - 1.000 - - - - - -
96. or125-7 ENSDARG00000093183 1 1 - - - - - - - 1.000 - odorant receptor, family E, subfamily 125, member 7 [Source:ZFIN;Acc:ZDB-GENE-070806-97]
97. CACNG5 CACNG5 1 1 - - - - - - - 1.000 -
98. si:dkeyp-80c12.4 ENSDARG00000036479 7 1 - - 1.000 - - - - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
99. TBC1D9B 1 1 - - 1.000 - - - - - - TBC1 domain family member 9B, transcript variant X2
100. CT583679.2 CT583679.2 10 1 - - - - - - - 1.000 -

There are 1302 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA