Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trmt2b

Gene Name Gene ID Reads Annotation
trmt2b ENSDARG00000033967 127 tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]










Genes with expression patterns similar to trmt2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trmt2b ENSDARG00000033967 127 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
2. ECM1 ECM1 87 2.388 - 0.925 0.727 - - - 0.736 - -
3. si:dkey-60a16.4 si:dkey-60a16.4 14 1.98 1.000 - - - - 0.980 - - -
4. CABZ01070007.1 CABZ01070007.1 5 1.974 1.000 0.974 - - - - - - -
5. zgc:163077 ENSDARG00000101593 60 1.974 1.000 0.974 - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
6. si:ch1073-127d16.1 ENSDARG00000087674 105 1.959 0.975 - - 0.984 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
7. map3k8 ENSDARG00000061710 76 1.925 1.000 0.925 - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
8. si:dkey-9i23.6 ENSDARG00000094678 58 1.897 1.000 - - - - 0.897 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
9. NMUR1 NMUR1 30 1.894 1.000 - - - - 0.894 - - -
10. JMJD1C JMJD1C 289 1.892 - - - 0.982 - 0.910 - - -
11. si:ch211-119c24.1 si:ch211-119c24.1 17 1.846 - 0.974 - - - 0.872 - - -
12. PGBD4_4 PGBD4_4 15 1.845 0.871 0.974 - - - - - - -
13. tuba4l ENSDARG00000074289 101 1.838 - - - 0.976 - 0.862 - - - tubulin, alpha 4 like [Source:ZFIN;Acc:ZDB-GENE-030131-5588]
14. znhit2 ENSDARG00000030805 197 1.835 - - - 0.982 - 0.853 - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
15. ANK1_1 ANK1_1 507 1.832 - 0.873 - 0.959 - - - - -
16. uvrag ENSDARG00000023815 424 1.82 0.870 - - 0.950 - - - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
17. si:dkey-261e22.5 si:dkey-261e22.5 68 1.761 - 0.938 - - - 0.823 - - -
18. cpeb4 cpeb4 57 1.76 0.871 0.889 - - - - - - -
19. MAP7_1 MAP7_1 42 1.76 - 0.974 - - - 0.786 - - -
20. si:ch211-263m18.4 ENSDARG00000093353 27 1.749 0.765 - - - - 0.984 - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
21. srrm2 ENSDARG00000037965 1967 1.745 - - - 0.936 - 0.809 - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
22. paqr7a ENSDARG00000100462 15 1.725 1.000 - - - - - 0.725 - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
23. asic4b ENSDARG00000004243 31 1.725 1.000 - - - - 0.725 - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
24. QSOX2 ENSDARG00000077174 26 1.715 - 0.974 - - - - 0.741 - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
25. NSUN6 ENSDARG00000103478 29 1.711 0.823 - - - - 0.888 - - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
26. si:dkeyp-20e4.3 si:dkeyp-20e4.3 68 1.705 - - - 0.980 - - 0.725 - -
27. ercc3 ENSDARG00000002402 340 1.704 - - - 0.974 - 0.730 - - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
28. iqcb1 ENSDARG00000101032 310 1.698 0.751 - - 0.947 - - - - - IQ motif containing B1 [Source:ZFIN;Acc:ZDB-GENE-041212-47]
29. exd2 ENSDARG00000016117 342 1.697 - - - 0.977 - 0.720 - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
30. CR677591.1 CR677591.1 19 1.692 - - - - - 0.897 0.795 - -
31. fgf10b ENSDARG00000100475 17 1.688 - 0.974 - - - - 0.714 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
32. CHCHD4 CHCHD4 185 1.687 - 0.787 - 0.900 - - - - -
33. rexo1 ENSDARG00000026986 770 1.687 0.703 - - 0.984 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
34. si:ch211-102c2.4 ENSDARG00000079387 101 1.683 0.823 - - - - 0.860 - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
35. tmc1 23 1.682 - 0.974 0.708 - - - - - - transmembrane channel-like 1, transcript variant X1
36. ism2 ism2 153 1.672 - - - - - 0.827 0.845 - -
37. inip ENSDARG00000028523 1925 1.655 - - - 0.882 - 0.773 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
38. dclre1a ENSDARG00000091768 94 1.655 0.946 - - - - - 0.709 - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
39. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.649 - 0.783 - - - 0.866 - - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
40. syt16 ENSDARG00000030761 322 1.643 - - - - - 0.850 0.793 - - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
41. dync2i1 dync2i1 83 1.621 0.823 - - - - 0.798 - - -
42. P2RY1 ENSDARG00000105281 45 1.621 0.905 - - - - 0.716 - - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
43. CLSTN2 ENSDARG00000060637 41 1.617 0.793 - - - - 0.824 - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
44. dcaf12 ENSDARG00000063155 697 1.612 - 0.707 - 0.905 - - - - - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
45. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 1.605 0.800 - - 0.805 - - - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
46. fibinb ENSDARG00000087196, ENSDARG00000110737 53 1.599 0.773 - - - - 0.826 - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
47. ifih1 ENSDARG00000018553 8 1.585 - 0.776 - - - - 0.809 - - interferon induced with helicase C domain 1 [Source:ZFIN;Acc:ZDB-GENE-081104-438]
48. fastkd3 ENSDARG00000100440 144 1.577 - 0.786 - - - 0.791 - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
49. FAM200A FAM200A 19 1.565 - 0.783 - - - 0.782 - - -
50. tmem136a ENSDARG00000024920 535 1.564 0.750 - - 0.814 - - - - - transmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
51. ndst2b ENSDARG00000060678 453 1.562 - 0.783 - - - - 0.779 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
52. pde6d ENSDARG00000074892, ENSDARG00000115562, ENSDARG00000115620 506 1.554 - 0.818 - - - 0.736 - - - phosphodiesterase 6D, cGMP-specific, rod, delta [Source:ZFIN;Acc:ZDB-GENE-040718-463]
53. tnfsf13b ENSDARG00000012945 54 1.55 - 0.776 - - - 0.774 - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
54. CABZ01063556.1 ENSDARG00000116344 319 1.541 0.702 0.839 - - - - - - - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
55. CR391977.3 CR391977.3 76 1.538 - - - - - 0.743 0.795 - -
56. atxn7l3 ENSDARG00000029331 531 1.536 - - - 0.798 - - 0.738 - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
57. hprt1l ENSDARG00000014866 696 1.509 - - 0.783 0.726 - - - - - hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
58. ca4c ENSDARG00000044512 102 1.506 - - 0.734 - - 0.772 - - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
59. efcab11 ENSDARG00000043740 178 1.5 - - - - - 0.739 0.761 - - EF-hand calcium binding domain 11 [Source:ZFIN;Acc:ZDB-GENE-050417-348]
60. oprk1 ENSDARG00000006894 43 1.491 - - - - - 0.777 0.714 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
61. dusp22b ENSDARG00000039850 133 1.49 0.756 - - - - 0.734 - - - dual specificity phosphatase 22b [Source:ZFIN;Acc:ZDB-GENE-050417-257]
62. zgc:173617 zgc:173617 114 1.451 - - 0.738 - - - 0.713 - -
63. cib2 ENSDARG00000102820 296 1.439 0.714 0.725 - - - - - - - calcium and integrin binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1663]
64. park2 42 1.439 - - 0.714 - - - 0.725 - - parkin RBR E3 ubiquitin protein ligase
65. GPR22_1 GPR22_1 28 1 1.000 - - - - - - - -
66. ABCA7 ABCA7 12 1 1.000 - - - - - - - -
67. C3AR1 18 1 1.000 - - - - - - - - C3a anaphylatoxin chemotactic receptor
68. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
69. APCDD1 ENSDARG00000098203 10 1 1.000 - - - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
70. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
71. shox2 ENSDARG00000075713 104 1 1.000 - - - - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
72. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
73. edil3 edil3 24 1 1.000 - - - - - - - -
74. cdcp1a ENSDARG00000058943 70 1 1.000 - - - - - - - - CUB domain containing protein 1a [Source:ZFIN;Acc:ZDB-GENE-050327-55]
75. si:dkey-156m18.1 si:dkey-156m18.1 13 1 1.000 - - - - - - - -
76. oprm1 ENSDARG00000039434 22 1 1.000 - - - - - - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
77. setmar ENSDARG00000074836 29 1 1.000 - - - - - - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
78. ftr14l ENSDARG00000078254 2 1 1.000 - - - - - - - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
79. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
80. mamdc2b ENSDARG00000073695 26 1 1.000 - - - - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
81. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
82. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
83. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
84. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
85. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
86. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
87. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
88. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
89. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
90. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
91. elfn2 elfn2 1 1 1.000 - - - - - - - -
92. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
93. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
94. CIR1 ENSDARG00000099733 66 1 1.000 - - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
95. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
96. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
97. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
98. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
99. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
100. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]

There are 1760 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA