Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-3_1

Gene Name Gene ID Reads Annotation
trim35-3_1 ENSDARG00000052255 6 tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]










Genes with expression patterns similar to trim35-3_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-3_1 ENSDARG00000052255 6 5 - 1.000 1.000 - 1.000 1.000 1.000 - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
2. si:ch73-44m9.3 ENSDARG00000040640, ENSDARG00000100357 3 1.95 - 1.000 0.950 - - - - - - si:ch73-44m9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-290]
3. tnni3k ENSDARG00000086933 37 1.948 - 1.000 0.948 - - - - - - TNNI3 interacting kinase [Source:ZFIN;Acc:ZDB-GENE-081104-399]
4. sebox ENSDARG00000042526 2 1.945 - 1.000 - - - - 0.945 - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
5. CR753817.1 ENSDARG00000110927 26 1.942 - 1.000 - - - - 0.942 - -
6. CU694952.2 CU694952.2 3 1.856 - 1.000 - - - 0.856 - - -
7. CABZ01049362.1 ENSDARG00000099508 570 1.856 - - - - 1.000 0.856 - - -
8. CU928220.1 CU928220.1 146 1.854 - 1.000 - - - - 0.854 - -
9. rprmb ENSDARG00000024006 120 1.801 - - - - - 0.856 0.945 - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
10. CABZ01054394.1 ENSDARG00000090942 12 1.796 - 1.000 - - - 0.796 - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
11. SLC15A5 ENSDARG00000089974 18 1.79 - 0.887 - - - - 0.903 - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
12. st6galnac1.1 ENSDARG00000043814 95 1.784 - 1.000 0.784 - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
13. il1rapl1b ENSDARG00000104853 52 1.772 - 1.000 - - - - 0.772 - - interleukin 1 receptor accessory protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-090109-2]
14. agt ENSDARG00000016412 17 1.766 - 0.910 - - - 0.856 - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
15. crfb12 ENSDARG00000052413 47 1.765 - - 0.903 - - - 0.862 - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
16. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1.748 - - - - - 0.856 0.892 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
17. scara3 ENSDARG00000008060 169 1.74 - 1.000 - - - - 0.740 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
18. rnf217 ENSDARG00000060944 10 1.711 - 1.000 - - 0.711 - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
19. nanos3 ENSDARG00000068255 319 1.627 - 0.747 - - 0.880 - - - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
20. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1.621 - - - - - 0.856 0.765 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
21. MSLNL MSLNL 41 1.612 - - - - - 0.907 0.705 - -
22. C18H3orf33 ENSDARG00000040582 77 1.528 - - 0.739 - - 0.789 - - - c18h3orf33 homolog (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-061121-2]
23. ftr59 ENSDARG00000095864, ENSDARG00000116989 25 1.493 - 0.729 - - - - 0.764 - - finTRIM family, member 59 [Source:ZFIN;Acc:ZDB-GENE-090508-4]
24. cftr ENSDARG00000041107, ENSDARG00000110312 56 1.49 - - - - - 0.702 0.788 - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
25. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
26. mylk3 ENSDARG00000076348 19 1 - - - - - - 1.000 - - myosin light chain kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3497]
27. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - 1.000 - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
28. FP325123.1 ENSDARG00000105359 246 1 - - - - - - 1.000 - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
29. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
30. AL928852.1 AL928852.1 23 1 - - - - - - 1.000 - -
31. cacna1c ENSDARG00000008398 193 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
32. ctskl ctskl 17 1 - 1.000 - - - - - - -
33. BX465203.2 BX465203.2 23 1 - - - - - - 1.000 - -
34. rcv1 rcv1 77 1 - 1.000 - - - - - - -
35. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
36. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
37. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
38. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
39. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
40. wu:fb37b09 wu:fb37b09 10685 1 - 1.000 - - - - - - -
41. C21H11orf82 C21H11orf82 50 1 - 1.000 - - - - - - -
42. taok3b ENSDARG00000094052 36 1 - 1.000 - - - - - - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
43. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1 - 1.000 - - - - - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
44. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
45. CR848784.2 ENSDARG00000111157 16 1 - - - - - - 1.000 - -
46. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
47. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
48. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
49. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - 1.000 - - - - - - -
50. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
51. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
52. si:ch211-268b13.3 si:ch211-268b13.3 28 1 - 1.000 - - - - - - -
53. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
54. mir457b 21 1 - 1.000 - - - - - - - microRNA 457b
55. CR848836.6 CR848836.6 93 1 - 1.000 - - - - - - -
56. si:ch73-7i4.1 ENSDARG00000094554 771 1 - - - - - - 1.000 - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
57. GRIN3A ENSDARG00000075802 27 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
58. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - 1.000 - - - - - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
59. gc2 ENSDARG00000018329 0 1 - 1.000 - - - - - - - guanylyl cyclase 2 [Source:ZFIN;Acc:ZDB-GENE-011128-8]
60. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
61. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
62. CABZ01087025.1 ENSDARG00000117232 10 1 - 1.000 - - - - - - -
63. si:ch211-149b19.2 ENSDARG00000088882 28 1 - - - - - 1.000 - - - si:ch211-149b19.2 [Source:ZFIN;Acc:ZDB-GENE-110411-60]
64. gata2b ENSDARG00000009094 16 1 - 1.000 - - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
65. ccdc129 37 1 - 1.000 - - - - - - - coiled-coil domain containing 129, transcript variant X2
66. BX511034.1 ENSDARG00000071629 7 1 - 1.000 - - - - - - -
67. mamdc2a ENSDARG00000098345 21 1 - 1.000 - - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
68. ankrd33aa ENSDARG00000055638 6 1 - 1.000 - - - - - - - ankyrin repeat domain 33Aa [Source:ZFIN;Acc:ZDB-GENE-080520-2]
69. CR628323.3 ENSDARG00000106158 1 1 - 1.000 - - - - - - - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
70. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
71. BX005421.4 BX005421.4 11 1 - - - - - - 1.000 - -
72. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
73. GABRR1 ENSDARG00000043902 71 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
74. VMAC ENSDARG00000110997 2 1 - 1.000 - - - - - - - vimentin type intermediate filament associated coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:33803]
75. CT027674.1 ENSDARG00000106606 11 1 - 1.000 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
76. ankar ENSDARG00000000516 3 1 - 1.000 - - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
77. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
78. im:7151068 im:7151068 2 1 - 1.000 - - - - - - -
79. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
80. si:ch1073-170o4.1 ENSDARG00000092780 18 1 - 1.000 - - - - - - - si:ch1073-170o4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7012]
81. PNPLA2 ENSDARG00000089390 0 1 - 1.000 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
82. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
83. ano8a ENSDARG00000076265 20 1 - 1.000 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
84. si:ch73-62b13.1 ENSDARG00000093269 11 1 - 1.000 - - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
85. C25H12orf29 C25H12orf29 31 1 - 1.000 - - - - - - -
86. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
87. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
88. heyl ENSDARG00000055798, ENSDARG00000112770 76 1 - 1.000 - - - - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
89. loxhd1a ENSDARG00000094738 7 1 - 1.000 - - - - - - - lipoxygenase homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-091112-20]
90. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
91. U11 U11 11 1 - 1.000 - - - - - - -
92. CU207301.2 ENSDARG00000097677 2 1 - 1.000 - - - - - - -
93. zgc:171506 ENSDARG00000078206, ENSDARG00000112252 3 1 - - - - - 1.000 - - - zgc:171506 [Source:ZFIN;Acc:ZDB-GENE-080204-96]
94. CR933820.2 CR933820.2 152 1 - 1.000 - - - - - - -
95. pcdh8 ENSDARG00000006467 317 1 - 1.000 - - - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
96. si:ch73-341p18.6 si:ch73-341p18.6 1 1 - - - - - - 1.000 - -
97. BX248582.3 BX248582.3 3 1 - 1.000 - - - - - - -
98. fancf ENSDARG00000019250 111 1 - 1.000 - - - - - - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
99. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
100. ankrd45 ENSDARG00000011326 62 1 - 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]

There are 784 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA