Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trim35-38

Gene Name Gene ID Reads Annotation
trim35-38 trim35-38 3










Genes with expression patterns similar to trim35-38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trim35-38 trim35-38 3 3 - 1.000 1.000 - 1.000 - - - -
2. si:ch73-289h5.3 si:ch73-289h5.3 9 1.993 - - 0.993 - 1.000 - - - -
3. si:dkey-4c15.13 ENSDARG00000095704 13 1.899 - 0.906 0.993 - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
4. PAMR1 ENSDARG00000093480 40 1.895 - 0.914 0.981 - - - - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
5. npy8br ENSDARG00000005780 15 1.843 - 1.000 0.843 - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
6. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - 1.000 - - - -
7. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - - - 1.000 - - - -
8. GPC5 GPC5 11 1 - 1.000 - - - - - - -
9. cacng5a ENSDARG00000003326 17 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
10. si:dkey-231l1.12 si:dkey-231l1.12 0 1 - - - - 1.000 - - - -
11. ZNF70_12 ZNF70_12 0 1 - - - - 1.000 - - - -
12. F13A1 F13A1 1 1 - - - - 1.000 - - - -
13. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
14. CABZ01076801.1 CABZ01076801.1 3 1 - - - - 1.000 - - - -
15. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - 1.000 - - - - - - -
16. dcst2 ENSDARG00000088693 1 1 - - - - 1.000 - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
17. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
18. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
19. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - 1.000 - - - - - - -
20. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1 - - - - 1.000 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
21. lrrc34 ENSDARG00000062235 23 1 - 1.000 - - - - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
22. ODF2 ODF2 6 1 - - - - 1.000 - - - -
23. si:ch211-141e20.5 si:ch211-141e20.5 7 1 - 1.000 - - - - - - -
24. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
25. DENND1C DENND1C 1 1 - 1.000 - - - - - - -
26. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1 - 1.000 - - - - - - -
27. blnk ENSDARG00000042722 56 1 - 1.000 - - - - - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
28. si:ch211-133d10.1 si:ch211-133d10.1 0 1 - - - - 1.000 - - - -
29. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
30. si:dkey-222f8.6 si:dkey-222f8.6 7 1 - - - - 1.000 - - - -
31. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
32. si:ch73-25f10.6 ENSDARG00000091932 1 1 - 1.000 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]
33. LINS LINS 42 1 - 1.000 - - - - - - -
34. zgc:92658 8 1 - - 1.000 - - - - - - zgc:92658
35. C1S ENSDARG00000100599 20 1 - 1.000 - - - - - - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
36. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
37. loxl4 ENSDARG00000025089 5 1 - - - - 1.000 - - - - lysyl oxidase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080722-19]
38. ryr2b ENSDARG00000003706 6 1 - 1.000 - - - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
39. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - - - - 1.000 - - - -
40. tnni2a.3 ENSDARG00000013752 15 1 - - 1.000 - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80]
41. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
42. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
43. CABZ01011032.1 CABZ01011032.1 1 1 - - - - 1.000 - - - -
44. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
45. LECT2 LECT2 4 1 - 1.000 - - - - - - -
46. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
47. CABZ01079251.1 ENSDARG00000100498 38 1 - 1.000 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
48. crygs1 ENSDARG00000042992 45 1 - - - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
49. PIK3R6_1 PIK3R6_1 1 1 - - - - 1.000 - - - -
50. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
51. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
52. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
53. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
54. inpp5k inpp5k 2 1 - - - - 1.000 - - - -
55. polr2b ENSDARG00000098783 90 1 - 1.000 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
56. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
57. si:ch211-206i14.2 si:ch211-206i14.2 3 1 - - - - 1.000 - - - -
58. slc26a4 ENSDARG00000069431 2 1 - - - - 1.000 - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
59. ftr12 ENSDARG00000053366, ENSDARG00000074118, ENSDARG00000113522 0 1 - - - - 1.000 - - - - finTRIM family, member 12 [Source:ZFIN;Acc:ZDB-GENE-070912-196]
60. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
61. tmem184b tmem184b 2 1 - - - - 1.000 - - - -
62. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
63. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - - 1.000 - - - -
64. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
65. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
66. wibg wibg 2 1 - - - - 1.000 - - - -
67. CU469532.1 CU469532.1 31 1 - 1.000 - - - - - - -
68. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - 1.000 - - - -
69. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
70. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - 1.000 - - - -
71. SLC2A11 SLC2A11 5 1 - - - - 1.000 - - - -
72. BX469912.1 ENSDARG00000110104 2 1 - - 1.000 - - - - - - zgc:174358 [Source:NCBI gene;Acc:100004662]
73. svopb ENSDARG00000014951 1 1 - 1.000 - - - - - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
74. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
75. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
76. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
77. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
78. dnaaf2 ENSDARG00000103132 24 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
79. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
80. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
81. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
82. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
83. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
84. slc9a5 ENSDARG00000078560 76 1 - 1.000 - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
85. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
86. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
87. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
88. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
89. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - 1.000 - - - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
90. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
91. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
92. ENSDARG00000096199 ENSDARG00000096199 15 1 - 1.000 - - - - - - -
93. pcdh2g12 5 1 - 1.000 - - - - - - - protocadherin 2 gamma 12
94. npffl ENSDARG00000045016 34 1 - 1.000 - - - - - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
95. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - 1.000 - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
96. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
97. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
98. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
99. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
100. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -

There are 530 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA