Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tradd

Gene Name Gene ID Reads Annotation
tradd ENSDARG00000036057, ENSDARG00000117083 1583 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]










Genes with expression patterns similar to tradd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tradd ENSDARG00000036057, ENSDARG00000117083 1583 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
2. slc25a39 ENSDARG00000007449 630 2.572 - - - - - 0.722 - 0.884 0.966 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
3. si:dkey-95p16.2 ENSDARG00000093484 3413 2.307 - - - 0.761 - 0.720 0.826 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
4. CABZ01070045.1 CABZ01070045.1 1322 2.201 - 0.724 - 0.723 - - 0.754 - -
5. trrap ENSDARG00000100623 3429 2.17 - 0.739 - - - - 0.730 0.701 - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
6. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.853 - - - - - - - 0.906 0.947 serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
7. polr3a ENSDARG00000102569 1072 1.846 - - - - - 0.892 - - 0.954 polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
8. ccdc3 ccdc3 559 1.844 - - - - - - - 0.934 0.910
9. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.841 - - - - - - - 0.880 0.961 pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
10. nxnl2 ENSDARG00000003934 386 1.833 - - - - - 0.860 - - 0.973 nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
11. C16H8orf76 C16H8orf76 329 1.829 - - - - - 0.899 - 0.930 -
12. cog2 ENSDARG00000004037 462 1.811 - - - 0.841 - - - - 0.970 component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
13. bag5 ENSDARG00000017316 195 1.809 - - - - - 0.867 - 0.942 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
14. ddx27 ENSDARG00000091831 1471 1.799 - - - - - - - 0.838 0.961 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
15. pelo ENSDARG00000055477 1927 1.798 - - - - - - - 0.897 0.901 pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
16. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.792 - - - - - - - 0.909 0.883 eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
17. fam86a fam86a 174 1.788 - - - - - 0.847 - 0.941 -
18. supt4h1 ENSDARG00000113969 1024 1.768 - - - - - 0.832 - - 0.936 SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
19. chsy3 ENSDARG00000069472 271 1.76 - - - - - 0.841 - 0.919 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
20. saal1 ENSDARG00000018681, ENSDARG00000109471 480 1.758 - - - 0.820 - - - 0.938 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
21. BX569781.3 BX569781.3 576 1.755 - - - - - - 0.791 - 0.964
22. atrip ENSDARG00000063076 385 1.752 - - - - - - 0.787 - 0.965 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
23. med22 ENSDARG00000014148 1307 1.749 - - - 0.863 - - - 0.886 - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
24. CABZ01066717.1 CABZ01066717.1 351 1.742 - - - - - 0.816 - 0.926 -
25. CNOT4_1 CNOT4_1 697 1.74 - - - - - 0.821 - - 0.919
26. MYO1D ENSDARG00000036863 768 1.735 - - - 0.800 - - - 0.935 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
27. zgc:113184 ENSDARG00000098181 500 1.735 - - - 0.786 - - - - 0.949 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
28. C5H9orf78 C5H9orf78 1550 1.734 - - - - - - - 0.840 0.894
29. Mar-06 Mar-06 953 1.728 - - - - - 0.858 - 0.870 -
30. pqbp1 ENSDARG00000029724 1472 1.721 - 0.871 - - - 0.850 - - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
31. zgc:136439 ENSDARG00000009267 720 1.719 - - - - - - 0.824 0.895 - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
32. sipa1l1 ENSDARG00000020134 565 1.718 - - - - - 0.765 - - 0.953 signal-induced proliferation-associated 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9909]
33. ccdc94 1417 1.714 - - - - - 0.807 - 0.907 - coiled-coil domain containing 94
34. zgc:110626 ENSDARG00000053159 1124 1.714 - - - - - - 0.759 0.955 - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
35. LPHN2 LPHN2 1971 1.713 - - - - - 0.909 0.804 - -
36. pttg1ipb ENSDARG00000040039 598 1.712 - - - - - 0.809 - 0.903 - PTTG1 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-041010-10]
37. MIS12 ENSDARG00000026454 649 1.708 - - - 0.766 - - - - 0.942 MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
38. KHDRBS3 ENSDARG00000101020 408 1.708 - - - - - 0.856 - 0.852 - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
39. xpnpep1 ENSDARG00000029011 1723 1.706 - - - - - 0.777 - - 0.929 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
40. znf668 ENSDARG00000025226, ENSDARG00000112533 177 1.703 - - - 0.833 - 0.870 - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
41. mtfr2 ENSDARG00000060394 482 1.699 - - - - - - 0.770 0.929 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
42. si:ch73-91k6.2 ENSDARG00000091598 727 1.699 - - - - - - 0.733 - 0.966 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
43. imp4 ENSDARG00000054540 1396 1.698 - - - - - - 0.736 - 0.962 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
44. C5H9orf16 C5H9orf16 743 1.693 - - - - - - 0.748 0.945 -
45. xrcc5_1 ENSDARG00000099298 1533 1.689 - - - - - - - 0.844 0.845 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
46. sall4 ENSDARG00000044485 1694 1.689 - - - - - - 0.869 - 0.820 spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
47. IKZF2 ENSDARG00000069111 1366 1.688 - - - - - - 0.810 - 0.878 IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
48. BICD2 ENSDARG00000075571 401 1.687 - - - 0.803 - 0.884 - - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
49. hsd11b2 ENSDARG00000001975 245 1.681 - - - - - 0.860 - 0.821 - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
50. stap2a ENSDARG00000092810 591 1.676 - - - 0.801 - - - 0.875 - signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
51. enpp4 ENSDARG00000006877, ENSDARG00000110396 994 1.675 - - - - - - 0.738 - 0.937 ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:ZFIN;Acc:ZDB-GENE-050417-444]
52. tmem206 ENSDARG00000012271 508 1.673 - - - 0.830 - 0.843 - - - transmembrane protein 206 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]
53. paf1 ENSDARG00000098432 1806 1.672 - - - - - 0.813 - - 0.859 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
54. CABZ01066772.1 CABZ01066772.1 299 1.671 - - - - - 0.746 - 0.925 -
55. ctnnal1 ENSDARG00000018162 747 1.669 - - - - - - 0.743 0.926 - catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
56. prkrira 971 1.669 - - - - - 0.756 - - 0.913 protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
57. grhl3 ENSDARG00000078552 897 1.667 - - - - - - 0.731 - 0.936 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
58. rnf13 ENSDARG00000019438 1560 1.666 - - - 0.735 - - - 0.931 - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
59. dennd4c ENSDARG00000102766 897 1.666 - - - - - - 0.725 - 0.941 DENN/MADD domain containing 4C [Source:ZFIN;Acc:ZDB-GENE-120727-13]
60. gas2l3 ENSDARG00000045880 614 1.664 - - - - - - - 0.736 0.928 growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
61. pacs1a ENSDARG00000044556, ENSDARG00000117043 914 1.657 - - - - - - 0.782 - 0.875 phosphofurin acidic cluster sorting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050208-244]
62. pnpla7b ENSDARG00000040002 1217 1.657 - - - - - - - 0.717 0.940 patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
63. timeless ENSDARG00000078497 1114 1.656 - - - - - 0.730 - - 0.926 timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
64. B3GNT2_1 B3GNT2_1 380 1.655 - - - 0.783 - 0.872 - - -
65. rhot2 ENSDARG00000056328 1123 1.654 - - - 0.766 - - - 0.888 - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
66. arrdc1b ENSDARG00000079839 236 1.649 - - - 0.856 - 0.793 - - - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
67. SLC27A2_1 SLC27A2_1 974 1.647 - - - - - 0.725 - - 0.922
68. sec22c ENSDARG00000063387 203 1.646 - - - 0.708 - - - 0.938 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
69. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.645 - - - - - - 0.747 - 0.898 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
70. faf2 ENSDARG00000052374 1351 1.643 - - - - - - 0.721 - 0.922 Fas associated factor family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-312]
71. dnttip2 ENSDARG00000057648 2381 1.64 - - - - - 0.729 - 0.911 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
72. prpf6 ENSDARG00000091367 1868 1.637 - - - - - - 0.707 - 0.930 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
73. psen2 ENSDARG00000015540 832 1.63 - - - - - 0.838 - 0.792 - presenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
74. rnf121 ENSDARG00000060282 1809 1.621 - - - - - - 0.714 0.907 - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
75. fam219aa ENSDARG00000016396 1788 1.619 - - - - - - 0.738 0.881 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
76. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.618 - - - - - 0.710 - - 0.908 zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
77. piezo1 ENSDARG00000076870 4704 1.616 - - - - - - 0.757 - 0.859 piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
78. C21H5orf15 C21H5orf15 2318 1.615 - - - - - - 0.845 - 0.770
79. CU570791.5 CU570791.5 872 1.612 - - - - - 0.813 0.799 - -
80. dpm2 ENSDARG00000095623, ENSDARG00000115283 981 1.607 - - - 0.834 - - 0.773 - - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9093]
81. atp6v1c1a ENSDARG00000023967 4611 1.603 - 0.717 - - - - - - 0.886 ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
82. gltpd1 gltpd1 377 1.599 - - - 0.834 - - 0.765 - -
83. sh3bp4a ENSDARG00000020000 1049 1.591 - - - - - 0.762 - 0.829 - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
84. MYO5A MYO5A 595 1.589 - - - 0.839 - 0.750 - - -
85. fkbp2 ENSDARG00000044540 1615 1.587 - - - 0.726 - - - - 0.861 FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
86. colgalt1 ENSDARG00000073974 1473 1.582 - - - 0.711 - - - - 0.871 collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
87. phf23a ENSDARG00000030887, ENSDARG00000115791 1918 1.581 - - - 0.712 - - - 0.869 - PHD finger protein 23a [Source:ZFIN;Acc:ZDB-GENE-050320-67]
88. CASKIN2_1 CASKIN2_1 2299 1.581 - - - 0.748 - - - - 0.833
89. micu2 ENSDARG00000009939 557 1.58 - - - 0.827 - 0.753 - - - mitochondrial calcium uptake 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3374]
90. si:ch211-113p18.3 ENSDARG00000087835 377 1.58 - - - 0.827 - - 0.753 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
91. FAM114A2 ENSDARG00000079508 1226 1.575 - 0.733 - - - - 0.842 - - family with sequence similarity 114, member A2 [Source:ZFIN;Acc:ZDB-GENE-030131-6308]
92. taldo1 ENSDARG00000103369 3804 1.573 - 0.707 - - - 0.866 - - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
93. ppdpfa ENSDARG00000007682 3214 1.567 - - - 0.826 - - 0.741 - - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
94. mntb ENSDARG00000073988 1023 1.565 - - - 0.857 - 0.708 - - - MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
95. sult6b1 ENSDARG00000086826 2070 1.562 - - - - - 0.756 - - 0.806 sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
96. fzd10 ENSDARG00000068213 1364 1.562 - - - - - - - 0.807 0.755 frizzled class receptor 10 [Source:ZFIN;Acc:ZDB-GENE-990415-220]
97. gclc ENSDARG00000013095 2146 1.562 - - - 0.805 - - - 0.757 - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
98. nop16 ENSDARG00000044402 3645 1.561 - - - - - - - 0.742 0.819 NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
99. SHKBP1 ENSDARG00000105050 1139 1.558 - - - - - 0.846 0.712 - - SH3KBP1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19214]
100. trim71 ENSDARG00000075593 2750 1.556 - - - - - - 0.748 - 0.808 tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]

There are 2180 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA