Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnrc6b

Gene Name Gene ID Reads Annotation
tnrc6b ENSDARG00000074161 4597 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]










Genes with expression patterns similar to tnrc6b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnrc6b ENSDARG00000074161 4597 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
2. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.507 - - - - 0.949 - 0.806 - 0.752 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
3. smg8 ENSDARG00000061378 1164 2.384 - - - - - 0.752 0.809 0.823 - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
4. dnajb12b ENSDARG00000087473 3811 2.347 - 0.838 0.756 - - - - - 0.753 DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
5. atad2b ENSDARG00000060537 3050 2.254 - - - 0.794 - - 0.709 - 0.751 ATPase family, AAA domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110411-210]
6. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.748 - - - - 0.879 - 0.869 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
7. NDUFB2 ENSDARG00000045490 9141 1.726 - - - - 0.937 0.789 - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
8. MAP4K4 ENSDARG00000098670 4665 1.725 - - - - 0.938 - - - 0.787 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
9. arhgap11a ENSDARG00000100019 1642 1.722 - - - - 0.885 - 0.837 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
10. tefb ENSDARG00000098103 370 1.716 - - - - - - 0.899 0.817 - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
11. arfgef2 ENSDARG00000074702 1593 1.714 - 0.840 - - 0.874 - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
12. rnaseh1 ENSDARG00000042571 922 1.71 - - - - 0.882 - 0.828 - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
13. kdm6bb ENSDARG00000056929 4807 1.708 - - - - 0.916 - - - 0.792 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
14. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.704 - - - - 0.929 - 0.775 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
15. exosc3 ENSDARG00000098334, ENSDARG00000104246 1287 1.697 - - - - 0.959 - 0.738 - - exosome component 3 [Source:ZFIN;Acc:ZDB-GENE-050706-140]
16. sf1 ENSDARG00000008188 5142 1.677 - - - - 0.849 - 0.828 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
17. cdk5 ENSDARG00000056683 1998 1.673 - - - - 0.886 - 0.787 - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
18. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.67 - - - - 0.873 - 0.797 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
19. snrnp27 ENSDARG00000035625 9080 1.669 - 0.830 - - 0.839 - - - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
20. upb1 ENSDARG00000011521, ENSDARG00000116790 920 1.669 - - - - 0.885 - 0.784 - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
21. HDAC5 ENSDARG00000075139 1287 1.663 - - - - - 0.818 0.845 - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
22. dram2b ENSDARG00000044241 503 1.651 - - - - - - 0.819 0.832 - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
23. taf5 ENSDARG00000018325 1363 1.648 - 0.845 - - - - 0.803 - - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
24. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.647 - - - - 0.927 - 0.720 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
25. dcaf12 ENSDARG00000063155 697 1.639 - - - - - - 0.785 0.854 - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
26. otx2 766 1.638 - - - - 0.885 - 0.753 - - orthodenticle homeobox 2, transcript variant X2
27. psmd4b ENSDARG00000023279 2002 1.635 - - - - - - 0.848 0.787 - proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
28. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.632 - - - - 0.883 - - - 0.749 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
29. sar1b ENSDARG00000103403 1699 1.631 - - - - - - 0.825 0.806 - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
30. NEDD4 NEDD4 2040 1.628 - - - - - 0.770 0.858 - -
31. gng5 ENSDARG00000039830 12102 1.627 - - - - - 0.848 0.779 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
32. slc20a1b ENSDARG00000010641 2564 1.626 0.743 - - - 0.883 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
33. pcif1 ENSDARG00000099084 2851 1.624 - - - - 0.879 - - - 0.745 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
34. cdk2ap2 ENSDARG00000103145 8024 1.623 - - - - - - 0.811 - 0.812 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
35. rbm25 rbm25 3629 1.623 - - - - 0.862 - - - 0.761
36. top2a ENSDARG00000024488 4273 1.619 - - - - 0.860 - - - 0.759 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
37. arhgap1 ENSDARG00000024324 6904 1.61 - 0.835 - - - - - - 0.775 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
38. ctnnb1 ENSDARG00000014571 12004 1.608 - - 0.701 - 0.907 - - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
39. pitx2 ENSDARG00000036194 2279 1.607 - - - - 0.878 - 0.729 - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
40. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.607 - - - - 0.877 - - - 0.730 F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
41. smg7 ENSDARG00000060767 2759 1.606 - - - - - - 0.889 - 0.717 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
42. znf280d ENSDARG00000077013 1387 1.605 - - - - 0.887 - - - 0.718 zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
43. spcs1 ENSDARG00000059298 5327 1.603 - - - - 0.866 - 0.737 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
44. tarsl2 ENSDARG00000092774 505 1.601 - - - - 0.883 0.718 - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
45. sf3a1 ENSDARG00000041887 6702 1.599 - - - - - - 0.858 - 0.741 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
46. gab1 ENSDARG00000037018 1489 1.598 0.715 - - - 0.883 - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
47. ARHGEF5 2727 1.596 - - - - 0.880 - 0.716 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
48. smu1 smu1 982 1.592 - - - - - - 0.810 0.782 -
49. gpm6ab ENSDARG00000004621 5825 1.588 - - - - 0.849 - - - 0.739 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
50. USO1 ENSDARG00000019581 1617 1.583 - - - - - - 0.810 0.773 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
51. KDM6B KDM6B 10265 1.579 - 0.812 - - 0.767 - - - -
52. acsl3b ENSDARG00000014674 3748 1.579 - 0.840 - - - - 0.739 - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
53. huwe1 ENSDARG00000016782 6493 1.577 0.870 - 0.707 - - - - - - HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
54. max ENSDARG00000024844 6035 1.575 - - - - - - 0.829 - 0.746 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
55. caprin1b ENSDARG00000054272 7033 1.575 - - - - - 0.732 0.843 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
56. ebna1bp2 ENSDARG00000054980 4621 1.573 - 0.832 - - - - 0.741 - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
57. polr2a ENSDARG00000099966 5706 1.572 - - - - - - 0.836 - 0.736 polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
58. cbx5 ENSDARG00000061187 24026 1.565 - - - - 0.786 - 0.779 - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
59. zgc:158463 ENSDARG00000089382 12172 1.565 0.743 - - - - - 0.822 - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
60. EPT1 EPT1 1912 1.562 - - - - - - 0.825 0.737 -
61. polr2d ENSDARG00000076509 3386 1.554 - 0.840 - - - - - - 0.714 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
62. ACVR1B ACVR1B 4824 1.553 - 0.837 - - - - - - 0.716
63. rrp1 ENSDARG00000103337 2366 1.55 - 0.840 - - - - - - 0.710 ribosomal RNA processing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9837]
64. tgfbr2 tgfbr2 1117 1.546 0.745 - - - - - 0.801 - -
65. mboat7 ENSDARG00000033436 848 1.546 - 0.845 - - - - 0.701 - - membrane bound O-acyltransferase domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1516]
66. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 1.545 - - - - - - 0.787 - 0.758 cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
67. crebbpa ENSDARG00000104609 1739 1.539 - - - - - - 0.738 0.801 - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
68. chrac1 ENSDARG00000042337 2590 1.537 - - - - - - 0.814 0.723 - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
69. galt ENSDARG00000069543 473 1.532 - - - - - 0.757 - 0.775 - galactose-1-phosphate uridylyltransferase [Source:ZFIN;Acc:ZDB-GENE-070112-172]
70. lbr ENSDARG00000014013 4835 1.531 - - - - - - 0.745 - 0.786 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
71. safb ENSDARG00000020467 5608 1.529 0.724 - - - - - - - 0.805 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
72. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.528 0.763 - - - - - - - 0.765 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
73. ppm1aa ENSDARG00000032155 1039 1.528 - - - - - - 0.752 0.776 - protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]
74. rcor1 ENSDARG00000031434 2733 1.527 - - - - - - 0.817 - 0.710 REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
75. txnrd1 11401 1.526 - 0.823 - - - - - - 0.703 thioredoxin reductase 1
76. ptpn23a ENSDARG00000070124 1206 1.525 - - - - - - 0.811 0.714 - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
77. lnpep ENSDARG00000100394 1436 1.524 - - - - - 0.794 - 0.730 - leucyl/cystinyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-1534]
78. prkceb ENSDARG00000069928, ENSDARG00000114025 330 1.515 - - - - - - 0.721 0.794 - protein kinase C, epsilon b [Source:ZFIN;Acc:ZDB-GENE-081028-47]
79. TSG101 TSG101 1686 1.51 0.777 - - - - - - 0.733 -
80. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.51 0.704 - - - - - 0.806 - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
81. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.507 0.796 - - - - 0.711 - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
82. usf1 ENSDARG00000041689 1619 1.506 - - - - - - 0.788 - 0.718 upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
83. SIRT5 ENSDARG00000039684 1124 1.504 0.719 - - - - - 0.785 - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
84. tbl1xr1a ENSDARG00000058696 5439 1.504 - - - - - 0.784 - - 0.720 transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
85. derl1 ENSDARG00000021905 4698 1.501 - - - - - - 0.762 0.739 - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
86. thoc1 ENSDARG00000088246 1718 1.497 - - - - - - 0.757 - 0.740 THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
87. usp7 ENSDARG00000073710 7017 1.496 - - - - - - 0.719 - 0.777 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
88. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.494 0.748 - - - - - 0.746 - -
89. hoxa13a ENSDARG00000100312 543 1.494 - - - - - - 0.780 0.714 - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
90. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 1.493 0.764 - - - - - 0.729 - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
91. BX296557.2 BX296557.2 1083 1.493 0.747 - - - - - 0.746 - -
92. slc44a1b ENSDARG00000090982 240 1.493 - - - - - - 0.706 0.787 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
93. ptgs2a ENSDARG00000004539 1207 1.492 - - - - - - 0.734 0.758 - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
94. csde1_1 ENSDARG00000074758 2759 1.49 - - - - - - 0.776 - 0.714 cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
95. znf827 ENSDARG00000076171 6304 1.49 - - - - - 0.772 - - 0.718 zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
96. gdi2 ENSDARG00000005451, ENSDARG00000113039 11258 1.488 - 0.755 - - - - 0.733 - - GDP dissociation inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2485]
97. srrt ENSDARG00000017762, ENSDARG00000114824 2158 1.487 - - - - - - 0.717 - 0.770 serrate RNA effector molecule homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-020419-13]
98. smarca5 ENSDARG00000052348 15433 1.486 - - - - - - 0.724 - 0.762 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
99. glmna ENSDARG00000058267 597 1.486 - - - - - - 0.712 0.774 - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
100. gna11b ENSDARG00000053326 5118 1.484 - - - - - - 0.764 - 0.720 guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]

There are 1706 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA