Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmf1

Gene Name Gene ID Reads Annotation
tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]










Genes with expression patterns similar to tmf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
2. rac2 ENSDARG00000038010 5837 2.381 - 0.813 0.837 - - - 0.731 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
3. ELMSAN1_1 ELMSAN1_1 1337 2.219 - 0.744 - - - 0.743 0.732 - -
4. tbc1d10a tbc1d10a 462 1.895 - - 0.993 - - - - 0.902 -
5. gnb1a ENSDARG00000090454 481 1.89 - - 0.992 - - - - 0.898 - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
6. AIFM2 ENSDARG00000077549 1419 1.822 - - 0.978 - - - 0.844 - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
7. bcl2l10 ENSDARG00000026766 1426 1.781 - - 0.976 - - - 0.805 - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
8. rarga ENSDARG00000034117 1238 1.778 - - 0.966 - - - - 0.812 - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
9. TSSC4 ENSDARG00000036144 1994 1.766 - - 0.968 - - - 0.798 - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
10. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.757 - 0.783 0.974 - - - - - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
11. MAP3K15 ENSDARG00000013310, ENSDARG00000110884 1232 1.752 - - - - - - 0.885 0.867 - mitogen-activated protein kinase kinase kinase 15 [Source:ZFIN;Acc:ZDB-GENE-091204-246]
12. sarnp ENSDARG00000059357 4768 1.744 - - 0.937 - - - 0.807 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
13. bag6l ENSDARG00000077531 1027 1.739 - 0.916 - - - - 0.823 - - BCL2 associated athanogene 6, like [Source:ZFIN;Acc:ZDB-GENE-060307-2]
14. ndufaf2 ENSDARG00000069286, ENSDARG00000114828 1563 1.737 - - 0.963 - - - 0.774 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040808-28]
15. srp14 ENSDARG00000115987 3575 1.732 - 0.754 0.978 - - - - - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
16. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.731 - - 0.960 - - - 0.771 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
17. tmem258 ENSDARG00000078785 9578 1.73 - - 0.906 - - - 0.824 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
18. apip ENSDARG00000003132 1212 1.726 - - 0.984 0.742 - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
19. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.723 - 0.750 0.973 - - - - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
20. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.712 - - - 0.804 - - - 0.908 - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
21. stk38a ENSDARG00000019973 1343 1.706 - - 0.983 - - - 0.723 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
22. clic1 ENSDARG00000103340 2235 1.705 - - 0.980 - - - 0.725 - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
23. rap1gap ENSDARG00000056554, ENSDARG00000110356 1284 1.689 - - 0.981 - - - 0.708 - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
24. kctd12.2 ENSDARG00000053542, ENSDARG00000113200 2951 1.685 - - 0.886 - - - 0.799 - - potassium channel tetramerisation domain containing 12.2 [Source:ZFIN;Acc:ZDB-GENE-060117-4]
25. AL929434.1 AL929434.1 3294 1.684 - - 0.892 - - - 0.792 - -
26. ankrd12 ENSDARG00000052419 2579 1.676 - 0.713 0.963 - - - - - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
27. mrps33 ENSDARG00000020015 3551 1.674 - - 0.970 0.704 - - - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
28. CABZ01103862.1 ENSDARG00000109235 3223 1.667 - - 0.961 - - - 0.706 - -
29. klhl41a ENSDARG00000068888 1034 1.661 - - - - - - 0.798 0.863 - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
30. zgc:91985 zgc:91985 1517 1.643 - - - - - 0.824 0.819 - -
31. decr2 ENSDARG00000045257 603 1.637 - 0.770 - - - - - 0.867 - 2,4-dienoyl CoA reductase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-040426-2612]
32. fbxl20 ENSDARG00000075567 138 1.636 - - - - - 0.731 - 0.905 - F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27]
33. zgc:175214 ENSDARG00000022891 1013 1.615 - - - - - - 0.777 0.838 - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
34. hmox2b ENSDARG00000078452, ENSDARG00000117010 884 1.596 - - - - - - 0.792 0.804 - heme oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-091118-52]
35. tsta3 ENSDARG00000039666 1314 1.579 - 0.797 - - - - - 0.782 - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
36. ncoa4 ENSDARG00000021439 4581 1.575 - 0.834 - - - - 0.741 - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
37. soul3 ENSDARG00000102257 939 1.573 - - - - - 0.720 0.853 - - heme-binding protein soul3 [Source:ZFIN;Acc:ZDB-GENE-060825-287]
38. CU638740.1_1 CU638740.1_1 387 1.571 - - - 0.843 - - 0.728 - -
39. cyp26c1 ENSDARG00000056029 1426 1.567 - - - - - 0.721 0.846 - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
40. tmem238 tmem238 1403 1.561 - 0.832 - - - - 0.729 - -
41. zdhhc17 ENSDARG00000070441 1073 1.55 - - - 0.719 - 0.831 - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
42. dnajc5ab ENSDARG00000004836 2923 1.548 - - - 0.759 - - 0.789 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
43. C8H5orf51 C8H5orf51 1199 1.547 - - - - - - 0.761 0.786 -
44. tmem168a ENSDARG00000068705 498 1.543 - - - - - - 0.779 0.764 - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
45. lmod1 lmod1 409 1.54 - 0.713 - - - - - 0.827 -
46. zgc:113442 ENSDARG00000101906 3092 1.523 - 0.751 - - - - 0.772 - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
47. dpf2 ENSDARG00000012219 666 1.523 - - - 0.713 - - - 0.810 - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
48. znf710a ENSDARG00000014680 582 1.522 - - - 0.721 - - - 0.801 - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
49. acbd3 ENSDARG00000042623 2643 1.521 - - - 0.704 - - - 0.817 - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
50. ZNF337_25 ZNF337_25 1713 1.519 - - - - - - 0.743 0.776 -
51. spc25 ENSDARG00000078433 1316 1.511 - - - - - 0.786 0.725 - - SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-13]
52. prrc2a ENSDARG00000031494 2217 1.507 - - - 0.780 - 0.727 - - - proline-rich coiled-coil 2A [Source:ZFIN;Acc:ZDB-GENE-010501-4]
53. ostm1 ENSDARG00000069808 1024 1.498 - 0.788 - - - - 0.710 - - osteopetrosis associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-270]
54. ost4 ENSDARG00000096118 7679 1.492 - 0.713 - - - - 0.779 - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
55. twf1a ENSDARG00000115712 3465 1.488 - 0.735 - - - - - 0.753 - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
56. gsk3aa ENSDARG00000029501 957 1.481 - - - - - 0.701 0.780 - - glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
57. HDAC5 ENSDARG00000075139 1287 1.462 - - - - - 0.720 0.742 - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
58. kremen1 ENSDARG00000062579 190 1.455 - - - - - 0.713 0.742 - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
59. smu1 smu1 982 1.406 - 0.705 - - - - 0.701 - -
60. mbtps2 ENSDARG00000057577 1285 0.994 - - 0.994 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
61. edc3 ENSDARG00000051931 780 0.993 - - 0.993 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
62. si:ch211-173m16.2 ENSDARG00000093284 186 0.993 - - 0.993 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
63. mxra8b ENSDARG00000062129 1004 0.993 - - 0.993 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
64. CR855996.2 ENSDARG00000104450 310 0.992 - - 0.992 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
65. ndufa4l2 153 0.992 - - 0.992 - - - - - - NDUFA4, mitochondrial complex associated like 2
66. si:dkey-220k22.3 ENSDARG00000094693 166 0.992 - - 0.992 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
67. CR382281.1 ENSDARG00000100098 135 0.992 - - 0.992 - - - - - -
68. sptlc3 ENSDARG00000030743 596 0.992 - - 0.992 - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
69. hipk3b ENSDARG00000062082 1248 0.991 - - 0.991 - - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
70. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.991 - - 0.991 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
71. prdm1a ENSDARG00000002445 1340 0.991 - - 0.991 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
72. CABZ01008011.1 CABZ01008011.1 761 0.991 - - 0.991 - - - - - -
73. GIT1 ENSDARG00000039489 1157 0.991 - - 0.991 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
74. c1ql3a ENSDARG00000010350 179 0.991 - - 0.991 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
75. si:dkey-54g2.6 si:dkey-54g2.6 252 0.991 - - 0.991 - - - - - -
76. npdc1 npdc1 221 0.991 - - 0.991 - - - - - -
77. tmco4 ENSDARG00000078924 330 0.991 - - 0.991 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
78. ppp1r14c ENSDARG00000077341 1587 0.99 - - 0.990 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
79. mark2a ENSDARG00000079905 1765 0.99 - - 0.990 - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
80. smpd1 ENSDARG00000076121 584 0.99 - - 0.990 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
81. ZNHIT6 ENSDARG00000095817 355 0.99 - - 0.990 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
82. wnt10a ENSDARG00000017155 491 0.99 - - 0.990 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
83. itsn1 ENSDARG00000000086 684 0.99 - - 0.990 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
84. MAP4_1 MAP4_1 1153 0.99 - - 0.990 - - - - - -
85. ralba ENSDARG00000040778 1574 0.99 - - 0.990 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
86. ercc5 ENSDARG00000023678 468 0.989 - - 0.989 - - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
87. si:dkey-92i15.4 ENSDARG00000078387 428 0.989 - - 0.989 - - - - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
88. PTDSS2 ENSDARG00000101018 881 0.988 - - 0.988 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
89. sema3fb ENSDARG00000055373 834 0.988 - - 0.988 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
90. si:ch211-250c4.3 si:ch211-250c4.3 677 0.988 - - 0.988 - - - - - -
91. hint3 ENSDARG00000074286 1015 0.987 - - 0.987 - - - - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
92. tbc1d12a ENSDARG00000038237 698 0.987 - - 0.987 - - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
93. slc2a10 ENSDARG00000090820 637 0.987 - - 0.987 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
94. ehd1a ENSDARG00000098853 1092 0.987 - - 0.987 - - - - - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
95. BX571715.2 BX571715.2 1316 0.987 - - 0.987 - - - - - -
96. dnajc3 dnajc3 802 0.987 - - 0.987 - - - - - -
97. ptges ENSDARG00000020136, ENSDARG00000115727 747 0.986 - - 0.986 - - - - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
98. TIFA TIFA 1519 0.986 - - 0.986 - - - - - -
99. galnt1 ENSDARG00000061335 1648 0.986 - - 0.986 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
100. hdac4 ENSDARG00000098349 1370 0.986 - - 0.986 - - - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]

There are 1421 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA