Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tma16

Gene Name Gene ID Reads Annotation
tma16 ENSDARG00000008068, ENSDARG00000115226 1169 translation machinery associated 16 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-20]










Genes with expression patterns similar to tma16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tma16 ENSDARG00000008068, ENSDARG00000115226 1169 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 translation machinery associated 16 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-20]
2. mff ENSDARG00000053753 905 1.805 - 1.000 - - - - - 0.805 - mitochondrial fission factor [Source:ZFIN;Acc:ZDB-GENE-040426-1510]
3. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.77 - 0.998 - - - - 0.772 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
4. slc7a3a ENSDARG00000020645 1458 1.767 - 0.974 - - - 0.793 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a [Source:ZFIN;Acc:ZDB-GENE-041114-206]
5. mllt4 mllt4 2939 1.741 - 0.997 - - - 0.744 - - -
6. pam ENSDARG00000100170 2442 1.736 - 0.974 - - - 0.762 - - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
7. si:ch211-191d2.2 ENSDARG00000090836 316 1.672 - - - - 0.786 - - 0.886 - si:ch211-191d2.2 [Source:ZFIN;Acc:ZDB-GENE-110407-3]
8. alg1 ENSDARG00000054963 334 1.59 - - - - - - 0.756 0.834 - ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-6093]
9. sin3aa ENSDARG00000079716 580 1.59 - - - - - 0.773 - 0.817 - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
10. med24 ENSDARG00000099431 893 1.588 - - - - - 0.768 0.820 - - mediator complex subunit 24 [Source:ZFIN;Acc:ZDB-GENE-030131-2341]
11. si:ch211-282k23.2 ENSDARG00000093591 447 1.534 - - - - - 0.742 0.792 - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
12. raly ENSDARG00000059972 481 1.53 - - - - - - 0.743 0.787 - RALY heterogeneous nuclear ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-041010-127]
13. foxc1a ENSDARG00000091481 1059 1.507 - - - - - - 0.777 0.730 - forkhead box C1a [Source:ZFIN;Acc:ZDB-GENE-010302-1]
14. cog8 ENSDARG00000002798 229 1.499 - - - - - 0.785 - 0.714 - component of oligomeric golgi complex 8 [Source:ZFIN;Acc:ZDB-GENE-050320-74]
15. elk1 ENSDARG00000078066 414 1.48 - - - - - 0.726 - 0.754 - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
16. fam96b 2255 1.478 0.716 - - - - 0.762 - - - family with sequence similarity 96, member B
17. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 1.467 - - - - - 0.755 0.712 - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
18. CR759921.2 CR759921.2 583 1.463 - - - - - 0.741 0.722 - -
19. BX927294.1 BX927294.1 361 1.458 - - - - - 0.727 - 0.731 -
20. ccni2 ENSDARG00000033046 418 1.456 - - - - - 0.709 0.747 - - cyclin I family, member 2 [Source:ZFIN;Acc:ZDB-GENE-081106-2]
21. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 1.416 - - - - - 0.713 0.703 - - actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
22. PRR5L PRR5L 408 1 - 1.000 - - - - - - -
23. hoxc1a ENSDARG00000070337 1460 1 - 1.000 - - - - - - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
24. noc4l ENSDARG00000045565 1337 1 - 1.000 - - - - - - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
25. txndc12 ENSDARG00000038980 795 1 - 1.000 - - - - - - - thioredoxin domain containing 12 (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-050522-497]
26. commd5 ENSDARG00000029660 517 1 - 1.000 - - - - - - - COMM domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040801-71]
27. mt-nd6 ENSDARG00000063922 788 1 - 1.000 - - - - - - - NADH dehydrogenase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-13]
28. GRAMD1C ENSDARG00000076238 795 1 - 1.000 - - - - - - - GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
29. DENND4B ENSDARG00000102914 1001 1 - 1.000 - - - - - - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
30. B3GNT2 B3GNT2 348 1 - 1.000 - - - - - - -
31. elnb ENSDARG00000069017 744 1 - 1.000 - - - - - - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
32. pus10 ENSDARG00000079973 637 1 - 1.000 - - - - - - - pseudouridylate synthase 10 [Source:ZFIN;Acc:ZDB-GENE-080204-5]
33. twf2a ENSDARG00000094792 687 1 - 1.000 - - - - - - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
34. oraov1 497 1 - 1.000 - - - - - - - oral cancer overexpressed 1
35. pdik1l ENSDARG00000056509 548 1 - 1.000 - - - - - - - PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]
36. hmp19 2554 1 - 1.000 - - - - - - - HMP19 protein
37. BAX BAX 1673 1 - 1.000 - - - - - - -
38. E2F2 E2F2 871 1 - 1.000 - - - - - - -
39. si:dkey-181m9.5 si:dkey-181m9.5 1079 1 - 1.000 - - - - - - -
40. si:ch211-286b5.5 ENSDARG00000096661 3136 0.999 - 0.999 - - - - - - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
41. rnaseh2a ENSDARG00000018891 1979 0.999 - 0.999 - - - - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
42. mob3a ENSDARG00000019113 2551 0.999 - 0.999 - - - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
43. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 0.999 - 0.999 - - - - - - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
44. cdh5 ENSDARG00000075549 2288 0.999 - 0.999 - - - - - - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
45. cyt1 ENSDARG00000092947 1717 0.999 - 0.999 - - - - - - - type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
46. lztfl1 ENSDARG00000105010 1697 0.999 - 0.999 - - - - - - - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
47. HOMEZ HOMEZ 1824 0.999 - 0.999 - - - - - - -
48. ptprmb ptprmb 1516 0.999 - 0.999 - - - - - - -
49. tsc2 ENSDARG00000103125 1403 0.999 - 0.999 - - - - - - - TSC complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2702]
50. map2 ENSDARG00000055052 6062 0.999 - 0.999 - - - - - - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
51. aurka ENSDARG00000012485 3304 0.999 - 0.999 - - - - - - - aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
52. samhd1 ENSDARG00000071288 1279 0.998 - 0.998 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
53. si:dkey-153m14.1 si:dkey-153m14.1 4591 0.998 - 0.998 - - - - - - -
54. tnfrsf9a ENSDARG00000060498, ENSDARG00000116466 679 0.998 - 0.998 - - - - - - - tumor necrosis factor receptor superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060421-8213]
55. cnppd1 ENSDARG00000027078 3778 0.998 - 0.998 - - - - - - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
56. IL17RD ENSDARG00000098359 2309 0.998 - 0.998 - - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
57. urm1 ENSDARG00000091198, ENSDARG00000111234 1213 0.998 - 0.998 - - - - - - - ubiquitin related modifier 1 [Source:ZFIN;Acc:ZDB-GENE-091204-300]
58. utp18 ENSDARG00000102618 1983 0.998 - 0.998 - - - - - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
59. lsmd1 lsmd1 2227 0.998 - 0.998 - - - - - - -
60. acsl1 acsl1 4216 0.998 - 0.998 - - - - - - -
61. mrps30 ENSDARG00000104111 2900 0.998 - 0.998 - - - - - - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
62. mir205 2147 0.998 - 0.998 - - - - - - - microRNA 205
63. hmcn1 ENSDARG00000016936 1706 0.998 - 0.998 - - - - - - - hemicentin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-322]
64. IM:7163548 IM:7163548 6540 0.998 - 0.998 - - - - - - -
65. dpy30 ENSDARG00000004427 7112 0.997 - 0.997 - - - - - - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
66. wnt5b ENSDARG00000102464 1662 0.997 - 0.997 - - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
67. mrps6 ENSDARG00000039543 1892 0.997 - 0.997 - - - - - - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
68. CABZ01076275.1 ENSDARG00000100753 5137 0.997 - 0.997 - - - - - - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
69. ENSDARG00000087348 ENSDARG00000087348 2870 0.996 - 0.996 - - - - - - -
70. calm1a ENSDARG00000021811 4791 0.996 - 0.996 - - - - - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
71. tusc2b ENSDARG00000025340 2391 0.996 - 0.996 - - - - - - - tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
72. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 0.995 - 0.995 - - - - - - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
73. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 0.995 - 0.995 - - - - - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
74. nxf1 ENSDARG00000055076 3251 0.995 - 0.995 - - - - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
75. nufip2 ENSDARG00000069066 3965 0.994 - 0.994 - - - - - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
76. cox6a1 ENSDARG00000022438 18811 0.993 - 0.993 - - - - - - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
77. mapkapk2a ENSDARG00000002552, ENSDARG00000116786 4233 0.993 - 0.993 - - - - - - - mitogen-activated protein kinase-activated protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5532]
78. metap2b_1 ENSDARG00000102571 5507 0.993 - 0.993 - - - - - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
79. myoz1b ENSDARG00000071445 13381 0.992 - 0.992 - - - - - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
80. ppapdc3 ppapdc3 4924 0.992 - 0.992 - - - - - - -
81. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 0.992 - 0.992 - - - - - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
82. msi2b ENSDARG00000032614 3095 0.992 - 0.992 - - - - - - - musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
83. zgc:91910 ENSDARG00000035678 6172 0.991 - 0.991 - - - - - - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
84. ppp1r12a ENSDARG00000010784 4333 0.991 - 0.991 - - - - - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
85. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 0.99 - 0.990 - - - - - - - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
86. zgc:63587 ENSDARG00000017140 8399 0.989 - 0.989 - - - - - - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
87. yif1a ENSDARG00000019636 2215 0.988 - 0.988 - - - - - - - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
88. capzb ENSDARG00000100252 10444 0.988 - 0.988 - - - - - - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
89. pvalb4 ENSDARG00000024433 35736 0.987 - 0.987 - - - - - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
90. matn4 ENSDARG00000015947 10967 0.987 - 0.987 - - - - - - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
91. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 0.986 - 0.986 - - - - - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
92. GCA GCA 5211 0.986 - 0.986 - - - - - - -
93. perp ENSDARG00000063572 6423 0.983 - 0.983 - - - - - - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
94. jun ENSDARG00000043531 3385 0.983 - 0.983 - - - - - - - Jun proto-oncogene, AP-1 transcription factor subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7859]
95. col4a5 ENSDARG00000052063 19251 0.981 - 0.981 - - - - - - - collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
96. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 0.978 - 0.978 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
97. phb ENSDARG00000057414 9551 0.978 - 0.978 - - - - - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
98. TEAD3 TEAD3 8614 0.977 - 0.977 - - - - - - -
99. wasla ENSDARG00000014113, ENSDARG00000113629, ENSDARG00000115471 1529 0.975 - 0.975 - - - - - - - Wiskott-Aldrich syndrome-like a [Source:ZFIN;Acc:ZDB-GENE-070209-220]
100. stambpl1 ENSDARG00000003085 665 0.975 - 0.975 - - - - - - - STAM binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-100215-4]

There are 844 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA