Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for syne3

Gene Name Gene ID Reads Annotation
syne3 ENSDARG00000023237 23 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]










Genes with expression patterns similar to syne3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. syne3 ENSDARG00000023237 23 8 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
2. GMNC ENSDARG00000068719 28 2 - - - - - 1.000 1.000 - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
3. tpbgl ENSDARG00000114338 5 2 - - - - - 1.000 1.000 - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
4. CABZ01088134.1 ENSDARG00000033587 4 2 - - - - - 1.000 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
5. psme2 ENSDARG00000033144 3 2 - - - - - 1.000 - 1.000 - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
6. TRIM35_1 TRIM35_1 11 2 - - - - - 1.000 1.000 - -
7. nceh1a ENSDARG00000020427 35 2 - - - - - 1.000 1.000 - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
8. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 2 - - - - - 1.000 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
9. GSC2 GSC2 3 1.986 - - - - - - 1.000 - 0.986
10. tmem168b ENSDARG00000062168 17 1.942 - - - - - 1.000 - - 0.942 transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
11. cx32.3 ENSDARG00000041787 33 1.855 - - - - - 0.907 0.948 - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
12. mir142a 20 1.83 - - - - - 1.000 - - 0.830 microRNA 142a
13. retsatl ENSDARG00000034989 41 1.83 - - - - - - 1.000 - 0.830 retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
14. C1S_1 C1S_1 11 1.83 - - - - - - 1.000 - 0.830
15. tuba7l ENSDARG00000104643 33 1.83 - - - - - - 1.000 - 0.830 tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
16. BX511066.3 BX511066.3 1 1.83 - - - - - - - 1.000 0.830
17. BX323882.1 ENSDARG00000101656 2 1.83 - - - - - - 1.000 - 0.830 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
18. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1.818 - - - - - - 1.000 - 0.818 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
19. CT030712.1 ENSDARG00000044355 83 1.795 0.795 - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
20. si:dkey-9p20.24 si:dkey-9p20.24 4 1.786 - - - - 0.786 - 1.000 - -
21. grn1 ENSDARG00000089362 20 1.762 - - - - - 0.762 1.000 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
22. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1.762 - - - - - 0.762 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
23. msgn1 ENSDARG00000070546 188 1.745 - - - - - 1.000 0.745 - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
24. ELFN2 ELFN2 7 1.742 - - - - - 0.742 1.000 - -
25. def8 ENSDARG00000068208 50 1.742 - - - - - 0.742 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
26. VOPP1 ENSDARG00000076373 12 1.706 - - - - - 1.000 - 0.706 - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
27. dyx1c1 dyx1c1 36 1.703 - - - - - 0.873 - - 0.830
28. CT573239.1 ENSDARG00000105292 247 1.636 - 0.877 - - - - 0.759 - - si:ch73-112j3.1 [Source:NCBI gene;Acc:101883515]
29. ccdc88b ENSDARG00000076189 123 1.628 - 0.898 - - - - 0.730 - - coiled-coil domain containing 88B [Source:ZFIN;Acc:ZDB-GENE-080303-31]
30. tpd52l1 ENSDARG00000042548 61 1.589 - - - - - 0.823 0.766 - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
31. dbpb ENSDARG00000057652, ENSDARG00000116703 71 1.547 - - - - - 0.742 0.805 - - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
32. CU694368.1 CU694368.1 56 1.506 - - - - - 0.787 0.719 - -
33. fnbp1l ENSDARG00000020131 79 1.463 0.727 - - - - - 0.736 - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
34. kcnh1a ENSDARG00000024167 9 1 - - - - - - 1.000 - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
35. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - - 1.000 - -
36. ITIH4 ITIH4 9 1 - - - - - - 1.000 - -
37. ST6GALNAC2 4 1 - - - - - - - 1.000 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
38. epha8 22 1 - - - - - - 1.000 - - eph receptor A8
39. si:dkey-31n13.4 ENSDARG00000101312 1 1 - - - - - - - 1.000 - si:dkey-31n13.4 [Source:ZFIN;Acc:ZDB-GENE-071008-3]
40. wasa ENSDARG00000015149 26 1 - - - - - - 1.000 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a [Source:ZFIN;Acc:ZDB-GENE-081104-419]
41. si:dkeyp-34a4.1 si:dkeyp-34a4.1 0 1 - - - - - 1.000 - - -
42. nfil3-4 ENSDARG00000092346 3 1 - - - - - 1.000 - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
43. si:ch211-274p24.2 ENSDARG00000095185 92 1 - - - - - - 1.000 - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
44. si:dkey-230i18.2 ENSDARG00000093532 0 1 - - - - - - 1.000 - - si:dkey-230i18.2 [Source:ZFIN;Acc:ZDB-GENE-070912-457]
45. STPG2 ENSDARG00000061060 16 1 - - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
46. tagapa ENSDARG00000002353 20 1 - - - - - 1.000 - - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
47. pmvk ENSDARG00000070798, ENSDARG00000109348 76 1 - - - - - 1.000 - - - phosphomevalonate kinase [Source:ZFIN;Acc:ZDB-GENE-070410-91]
48. si:zfos-1505d6.3 ENSDARG00000089966 3 1 - - - - - - - 1.000 - si:zfos-1505d6.3 [Source:ZFIN;Acc:ZDB-GENE-120214-22]
49. BX000477.1 BX000477.1 1 1 - - - - - 1.000 - - -
50. CABZ01073069.1 CABZ01073069.1 5 1 - - - - - - 1.000 - -
51. FP236631.1 FP236631.1 3 1 - - - - - - - 1.000 -
52. si:dkeyp-4f2.6 ENSDARG00000095596 3 1 - - - - - 1.000 - - - si:dkeyp-4f2.6 [Source:ZFIN;Acc:ZDB-GENE-110914-212]
53. si:ch211-219a15.4 ENSDARG00000068951 3 1 - - - - - - 1.000 - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
54. fam154b fam154b 2 1 - - - - - - 1.000 - -
55. sync ENSDARG00000035944 8 1 - - - - - - 1.000 - - syncoilin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-060503-747]
56. drl ENSDARG00000078004 43 1 - - - - - 1.000 - - - draculin [Source:ZFIN;Acc:ZDB-GENE-991213-3]
57. si:dkey-285e18.3 si:dkey-285e18.3 10 1 - - - - - 1.000 - - -
58. SYNPO 2 1 - - - - - - - 1.000 - synaptopodin, transcript variant X2
59. zgc:110249 ENSDARG00000035221 68 1 - - - - - - 1.000 - - zgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
60. ccdc147 ccdc147 39 1 - - - - - - 1.000 - -
61. si:ch73-44m9.2 ENSDARG00000094821 101 1 - - - - - - 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
62. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - 1.000 - -
63. CABZ01054405.2 CABZ01054405.2 46 1 - - - - - - 1.000 - -
64. AP5Z1 ENSDARG00000078111 91 1 - - - - - - 1.000 - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
65. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
66. GRAMD3 GRAMD3 4 1 - - - - - - - 1.000 -
67. styx ENSDARG00000057699 48 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
68. DLK1 60 1 - - - - - - 1.000 - - delta like non-canonical Notch ligand 1
69. epb41l3b ENSDARG00000019917 9 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
70. si:ch211-191a16.3 si:ch211-191a16.3 31 1 - - - - - - 1.000 - -
71. si:dkey-220o21.5 si:dkey-220o21.5 24 1 - - - - - 1.000 - - -
72. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 - - - - - - 1.000 - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
73. ms4a17a.2 ENSDARG00000105674 32 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
74. CABZ01053600.1 CABZ01053600.1 0 1 - - - - - - 1.000 - -
75. si:dkey-24i24.3 ENSDARG00000088452 27 1 - - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
76. abcg5 ENSDARG00000063078, ENSDARG00000115809 0 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-40]
77. HPX ENSDARG00000012609 781 1 - - - - - 1.000 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
78. CABZ01074946.1 CABZ01074946.1 119 1 - - - - - 1.000 - - -
79. tmem178 ENSDARG00000020758 77 1 - - - - - - 1.000 - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
80. upp2 ENSDARG00000036833 1 1 - - - - - - 1.000 - - uridine phosphorylase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-830]
81. si:dkey-119g10.3 si:dkey-119g10.3 0 1 - - - - - - 1.000 - -
82. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
83. BX000999.2 BX000999.2 2353 1 - - - - - - - 1.000 -
84. TRIM8 TRIM8 5 1 - - - - - - - 1.000 -
85. RP1 ENSDARG00000077687 6 1 - - - - - 1.000 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
86. BX005022.1 ENSDARG00000114221 0 1 - - - - - - 1.000 - -
87. swsap1 ENSDARG00000093423 14 1 - - - - - - 1.000 - - SWIM-type zinc finger 7 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-071116-2]
88. U6_12 U6_12 0 1 - - - - - 1.000 - - -
89. col7a1l ENSDARG00000069692 44 1 - - - - - 1.000 - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
90. ggcta ENSDARG00000076406 33 1 - - - - - 1.000 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
91. si:ch211-194e1.8 si:ch211-194e1.8 14 1 - - - - - - 1.000 - -
92. col5a3b ENSDARG00000101816 56 1 - - - - - 1.000 - - - collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
93. si:dkey-8o9.6 si:dkey-8o9.6 0 1 - - - - - 1.000 - - -
94. si:dkeyp-13d11.2 79 1 - - - - - 1.000 - - - si:dkeyp-13d11.2
95. rictora ENSDARG00000100867 20 1 - - - - - - 1.000 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
96. lrit1b ENSDARG00000099406 12 1 - - - - - - 1.000 - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b [Source:ZFIN;Acc:ZDB-GENE-060616-45]
97. taar14l ENSDARG00000069213 11 1 - - - - - - 1.000 - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
98. BX572630.2 BX572630.2 0 1 - - - - - - 1.000 - -
99. wisp2 ENSDARG00000077882 3 1 - - - - - - 1.000 - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
100. ANKRD34A 22 1 - - - - - - 1.000 - - ankyrin repeat domain 34A, transcript variant X2

There are 922 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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