Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sycp3

Gene Name Gene ID Reads Annotation
sycp3 ENSDARG00000013438 25 synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]










Genes with expression patterns similar to sycp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sycp3 ENSDARG00000013438 25 6 1.000 - 1.000 1.000 1.000 1.000 - - 1.000 synaptonemal complex protein 3 [Source:ZFIN;Acc:ZDB-GENE-040910-2]
2. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.99 1.000 - - - 0.990 - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
3. LRFN2_1 LRFN2_1 17 1.886 1.000 - - - 0.886 - - - -
4. si:dkey-207m2.4 ENSDARG00000089831, ENSDARG00000100654 3 1.744 1.000 - - - - 0.744 - - - si:dkey-207m2.4 [Source:ZFIN;Acc:ZDB-GENE-081103-58]
5. si:dkey-163m14.7 65 1.73 0.927 - - - - 0.803 - - - si:dkey-163m14.7
6. si:ch73-29c22.1 ENSDARG00000090948 5 1.716 1.000 - - - 0.716 - - - - si:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
7. snx8b ENSDARG00000078057 15 1.569 - - - 0.788 0.781 - - - - sorting nexin 8b [Source:ZFIN;Acc:ZDB-GENE-090313-317]
8. tmem167b ENSDARG00000059400 9 1.515 0.771 - - - - 0.744 - - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
9. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
10. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
11. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
12. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
13. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
14. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
15. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
16. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
17. BEGAIN BEGAIN 39 1 1.000 - - - - - - - -
18. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
19. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
20. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
21. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
22. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
23. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
24. dync1i2b ENSDARG00000103195 46 1 1.000 - - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
25. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
26. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
27. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
28. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
29. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
30. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
31. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
32. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
33. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
34. si:ch211-216b21.2 ENSDARG00000060253 54 1 1.000 - - - - - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
35. helt ENSDARG00000056400 482 1 1.000 - - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
36. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -
37. BX914198.1 BX914198.1 5 1 1.000 - - - - - - - -
38. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
39. lppr4a lppr4a 141 1 1.000 - - - - - - - -
40. jakmip2 ENSDARG00000053547 32 1 1.000 - - - - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
41. kcng4 kcng4 37 1 1.000 - - - - - - - -
42. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
43. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
44. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
45. TRAPPC9 ENSDARG00000099118 26 1 1.000 - - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
46. iqsec3b ENSDARG00000093091 10 1 1.000 - - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
47. CABZ01113978.1 CABZ01113978.1 1 1 1.000 - - - - - - - -
48. synpr ENSDARG00000044278 20 1 1.000 - - - - - - - - synaptoporin [Source:ZFIN;Acc:ZDB-GENE-030616-625]
49. si:dkey-200l5.4 ENSDARG00000095294 13 1 1.000 - - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
50. ADAP2 ENSDARG00000070565 29 1 1.000 - - - - - - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
51. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
52. trim9 ENSDARG00000039123 53 1 1.000 - - - - - - - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
53. ARHGEF40 ENSDARG00000078979 25 1 1.000 - - - - - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
54. CABZ01065506.1 CABZ01065506.1 204 1 1.000 - - - - - - - -
55. si:ch211-113a14.14 si:ch211-113a14.14 3 1 1.000 - - - - - - - -
56. lrch4 ENSDARG00000068258 24 1 1.000 - - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
57. BICD1 BICD1 9 1 1.000 - - - - - - - -
58. si:dkey-203o14.2 si:dkey-203o14.2 5 1 1.000 - - - - - - - -
59. zgc:101731 ENSDARG00000040965 27 1 1.000 - - - - - - - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
60. BX649314.1 BX649314.1 3 1 1.000 - - - - - - - -
61. wu:fj39g12 ENSDARG00000043460 8 1 1.000 - - - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
62. cnn1b ENSDARG00000102398 40 1 1.000 - - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
63. ZNF784_2 ZNF784_2 181 1 1.000 - - - - - - - -
64. CCL-C11B CCL-C11B 51 1 1.000 - - - - - - - -
65. PGBD4 ENSDARG00000079328 20 1 1.000 - - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
66. ARID5B ENSDARG00000037196 165 1 1.000 - - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
67. ZDHHC12 ZDHHC12 29 1 1.000 - - - - - - - -
68. 5S_rRNA_22 5S_rRNA_22 45 1 1.000 - - - - - - - -
69. AP5Z1 ENSDARG00000078111 91 1 1.000 - - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
70. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
71. DLK1 60 1 1.000 - - - - - - - - delta like non-canonical Notch ligand 1
72. FP236631.1 FP236631.1 3 1 1.000 - - - - - - - -
73. tmem196b ENSDARG00000090140 20 1 1.000 - - - - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
74. CABZ01076817.1 CABZ01076817.1 4 1 1.000 - - - - - - - -
75. BX530018.1 ENSDARG00000037576 2 1 1.000 - - - - - - - - D(1) dopamine receptor-like [Source:NCBI gene;Acc:567498]
76. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1 1.000 - - - - - - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
77. CABZ01073736.1 ENSDARG00000099438 81 1 1.000 - - - - - - - -
78. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
79. rtn4r ENSDARG00000090035 46 1 1.000 - - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
80. si:ch211-113a14.26_1 5 1 1.000 - - - - - - - - si:ch211-113a14.26
81. zgc:113307 ENSDARG00000044894 17 1 1.000 - - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
82. FAXC FAXC 102 1 1.000 - - - - - - - -
83. BX548021.2 BX548021.2 4 1 1.000 - - - - - - - -
84. si:dkey-49n23.3 ENSDARG00000095325 4 1 1.000 - - - - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
85. MAST1 MAST1 29 1 1.000 - - - - - - - -
86. kcnt1 ENSDARG00000079484 45 1 1.000 - - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
87. si:ch211-10j20.7 si:ch211-10j20.7 8 1 1.000 - - - - - - - -
88. prdm11 ENSDARG00000074468 2 1 1.000 - - - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
89. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
90. DIP2B DIP2B 18 1 1.000 - - - - - - - -
91. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
92. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
93. si:dkey-266f7.10 ENSDARG00000086613 7 1 1.000 - - - - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
94. lppr5b lppr5b 23 1 1.000 - - - - - - - -
95. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
96. BX324155.2 BX324155.2 1 1 1.000 - - - - - - - -
97. si:ch73-57f22.2 ENSDARG00000087453 28 1 1.000 - - - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
98. elovl4a ENSDARG00000006773 412 1 1.000 - - - - - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
99. zgc:174694 zgc:174694 2 1 1.000 - - - - - - - -
100. si:dkeyp-53d3.3 ENSDARG00000098664 65 1 1.000 - - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]

There are 526 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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