Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sumo3b

Gene Name Gene ID Reads Annotation
sumo3b ENSDARG00000035993 3414 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]










Genes with expression patterns similar to sumo3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sumo3b ENSDARG00000035993 3414 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
2. brd3a ENSDARG00000006527 1636 3.969 0.897 - 0.708 0.784 - 0.759 - - 0.821 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
3. znf207a ENSDARG00000015538 2630 3.125 0.857 - - 0.720 - - 0.759 - 0.789 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
4. carm1 ENSDARG00000018698 5599 3.03 - - - - 0.767 - 0.710 0.834 0.719 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
5. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.951 - - 0.748 0.709 0.753 - 0.741 - - nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
6. syncripl ENSDARG00000026723 3889 2.723 0.935 - - - - - 0.890 - 0.898 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
7. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.677 - - - - - - 0.893 0.873 0.911 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
8. pabpn1 ENSDARG00000045373 4876 2.511 - 0.765 - - - - 0.840 - 0.906 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
9. TNPO2 ENSDARG00000042887 2290 2.482 - 0.709 - 0.897 - - - - 0.876 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
10. tmed7 ENSDARG00000046022 2435 2.463 0.861 0.808 - - - - - 0.794 - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
11. bnip3la ENSDARG00000025468 3097 2.441 - 0.801 - - - - - 0.829 0.811 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
12. znf292b ENSDARG00000043973 3791 2.438 - 0.898 - - - - 0.776 0.764 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
13. tmpob ENSDARG00000022978 8121 2.435 - 0.787 0.795 - - - - 0.853 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
14. psmb2 ENSDARG00000031511 4016 2.421 0.763 0.822 - - - 0.836 - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
15. si:ch211-288g17.3 ENSDARG00000070959 2425 2.401 - - 0.741 - - - 0.850 - 0.810 si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
16. mycbp ENSDARG00000091001 1511 2.393 0.909 - - - - 0.748 0.736 - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
17. srsf6b ENSDARG00000016783 9926 2.385 - - - - 0.712 - 0.789 - 0.884 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
18. siah1 ENSDARG00000030871 1590 2.378 - 0.741 - - - - 0.851 0.786 - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
19. pou2f1b ENSDARG00000007996 2172 2.372 - 0.801 0.735 - - - 0.836 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
20. morc2 ENSDARG00000028539 3259 2.371 - - 0.755 0.796 - - - - 0.820 MORC family CW-type zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-040822-40]
21. CR936437.1 CR936437.1 6465 2.363 - - 0.750 0.758 - - 0.855 - -
22. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 2.358 0.790 - - - - 0.775 0.793 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
23. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.357 - - - 0.710 - - 0.755 - 0.892 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
24. u2af2b ENSDARG00000011740 6946 2.349 - - 0.751 0.702 - - - - 0.896 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
25. plcg1 ENSDARG00000038442 5324 2.339 - 0.784 - - - - 0.763 - 0.792 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
26. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.334 - - 0.719 - - - 0.788 - 0.827 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
27. ahctf1 ENSDARG00000077530 2315 2.331 0.838 - - 0.770 - - 0.723 - - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
28. h2afva ENSDARG00000068820 16427 2.327 - - - 0.769 - 0.746 0.812 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
29. e2f8 ENSDARG00000057323 1432 2.315 - 0.791 0.786 - - - 0.738 - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
30. txnl4a ENSDARG00000036190 2048 2.314 - - - - - - 0.703 0.750 0.861 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
31. ylpm1 ENSDARG00000043680 7676 2.311 - 0.725 0.710 - - - 0.876 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
32. MKI67 ENSDARG00000091150 11038 2.296 - - - - - 0.711 0.830 - 0.755 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
33. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.293 - - 0.789 - 0.761 - 0.743 - - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
34. sox2 ENSDARG00000070913 2763 2.288 - - 0.736 - 0.706 - - 0.846 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
35. msi1 ENSDARG00000010710 2634 2.279 - - 0.705 0.760 - - - - 0.814 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
36. fam76b ENSDARG00000012432 2722 2.261 0.706 - - - - - 0.758 0.797 - family with sequence similarity 76, member B [Source:ZFIN;Acc:ZDB-GENE-030131-6955]
37. hspa5 ENSDARG00000103846 4661 2.238 - 0.747 - - - - 0.762 - 0.729 heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
38. vdac1 ENSDARG00000045132 8051 2.231 - 0.736 - - - - 0.717 - 0.778 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
39. nr2f2 ENSDARG00000040926 5213 2.228 - - - - 0.726 - 0.778 0.724 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
40. dnmt3b dnmt3b 2522 2.181 - 0.743 0.729 - - - 0.709 - -
41. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.181 - 0.730 - - - - 0.714 0.737 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
42. usp49 ENSDARG00000000229 706 1.801 0.938 - - - - - - - 0.863 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
43. abca1a ENSDARG00000074635 1085 1.78 0.879 - - - - - - - 0.901 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
44. ZBTB16 ZBTB16 3385 1.778 0.942 0.836 - - - - - - -
45. pcnxl3 pcnxl3 756 1.763 0.926 - - - - - - - 0.837
46. RNF5 ENSDARG00000075606 1730 1.746 0.946 - - - - - - 0.800 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
47. cnot3a ENSDARG00000007135 3084 1.742 0.872 - - - - - - - 0.870 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
48. rwdd ENSDARG00000068256 964 1.741 0.927 - - - - - - - 0.814 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
49. spryd7a ENSDARG00000052624 1059 1.739 0.932 - - - - - - - 0.807 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
50. tmem55a 1331 1.733 0.921 - - - - - - 0.812 - transmembrane protein 55A
51. ptges3b_1 ENSDARG00000089626 1670 1.73 - - - - - - - 0.878 0.852 prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
52. si:dkey-238o13.4 ENSDARG00000078847 884 1.729 0.918 - - - - - - 0.811 - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
53. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.727 - - - - - - - 0.801 0.926 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
54. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.726 0.948 0.778 - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
55. map3k7 ENSDARG00000020469 2845 1.724 0.917 0.807 - - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
56. wu:fj29h11 ENSDARG00000096562 863 1.724 - - - - - - 0.854 - 0.870 wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
57. ptpn21 ENSDARG00000062248 2010 1.716 0.930 - - - - - - 0.786 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
58. ankrd28b ENSDARG00000009023 960 1.716 0.915 - - - - - 0.801 - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
59. phf10 ENSDARG00000070084 1210 1.708 - - - - - - - 0.818 0.890 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
60. her15.2 her15.2 1701 1.706 0.887 - - - - - - - 0.819
61. CASKIN2_1 CASKIN2_1 2299 1.706 0.890 - - - - - - 0.816 -
62. SCML2 ENSDARG00000012949 1310 1.704 0.896 - - - - - - 0.808 - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
63. melk ENSDARG00000030759 1150 1.702 - - - - - 0.840 - - 0.862 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
64. CABZ01087568.1 CABZ01087568.1 1487 1.702 0.866 - - - - - - - 0.836
65. dlg5a ENSDARG00000074059 1834 1.701 0.948 - - - - - - 0.753 - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
66. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.701 0.953 - - - - - - - 0.748 protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
67. cwc22 ENSDARG00000014008 2385 1.701 - - - - - - - 0.857 0.844 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
68. rerea ENSDARG00000077353 4162 1.699 0.907 - - - - - - - 0.792 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
69. llgl1 ENSDARG00000009693 4205 1.697 0.867 - - - - - 0.830 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
70. cpsf5 cpsf5 1841 1.697 0.921 - - - - - 0.776 - -
71. irx5a ENSDARG00000034043 1694 1.696 - - - - - - - 0.821 0.875 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
72. prpf4bb ENSDARG00000040310 2260 1.695 - - - - - - - 0.800 0.895 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
73. psma8 ENSDARG00000010965 8321 1.693 0.853 0.840 - - - - - - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
74. lyrm4 ENSDARG00000078352 2245 1.684 0.927 - - - - - 0.757 - - LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
75. SPAG5 SPAG5 1117 1.681 0.954 - - - - - 0.727 - -
76. pspc1 ENSDARG00000006621 966 1.675 - - - - - - 0.818 - 0.857 paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
77. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.671 - - - - - - 0.832 - 0.839 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
78. bbip1 ENSDARG00000071046, ENSDARG00000112897, ENSDARG00000116522 1062 1.669 - - - - - - - 0.813 0.856 BBSome interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050208-445]
79. hoxd10a ENSDARG00000057859 1498 1.669 0.930 - - - - - 0.739 - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
80. TRIM14 TRIM14 1424 1.668 0.914 0.754 - - - - - - -
81. tom1 ENSDARG00000104581 1457 1.664 0.893 - - - - - - - 0.771 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
82. dhdds ENSDARG00000039851 1135 1.663 - - - - - - - 0.870 0.793 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
83. mto1 ENSDARG00000055679 859 1.662 0.907 0.755 - - - - - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
84. srp19 ENSDARG00000035699 2624 1.659 0.892 - - - - - - 0.767 - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
85. ftsjd2 ftsjd2 2694 1.658 - 0.809 - - - - - - 0.849
86. mllt4 mllt4 2939 1.657 0.863 - - - - - - - 0.794
87. arid1b ENSDARG00000092503 1376 1.653 - - - - - - 0.780 - 0.873 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
88. AL929022.2 AL929022.2 567 1.652 0.939 - - - - - 0.713 - -
89. mybl2 mybl2 1341 1.65 0.915 - - - - - 0.735 - -
90. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.65 - - - - - - 0.775 - 0.875 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
91. psmb6 ENSDARG00000002240 8015 1.649 - 0.866 - - - - - 0.783 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
92. tbl3 ENSDARG00000052344 1530 1.648 - - - - - - 0.836 0.812 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
93. bmpr1ba ENSDARG00000104100 828 1.646 0.881 0.765 - - - - - - - bone morphogenetic protein receptor, type IBa [Source:ZFIN;Acc:ZDB-GENE-991208-8]
94. ano9a ENSDARG00000076320, ENSDARG00000078941 865 1.645 - 0.768 - - - - - - 0.877 anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]
95. mad2l1 ENSDARG00000004713 3398 1.642 0.898 - - - - - 0.744 - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
96. ubl3b ENSDARG00000021556 1210 1.642 - - - - - - 0.796 - 0.846 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
97. CHD1 ENSDARG00000103787 1645 1.639 - - 0.726 - - - - - 0.913 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
98. UBL4A UBL4A 1115 1.639 - - - - - - - 0.799 0.840
99. RBM6 ENSDARG00000077060 3521 1.637 0.832 - - - - - - - 0.805 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
100. lrrfip2 ENSDARG00000010400 2633 1.637 0.793 0.844 - - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]

There are 2132 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA