Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for stm

Gene Name Gene ID Reads Annotation
stm ENSDARG00000035694 1567 starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]










Genes with expression patterns similar to stm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stm ENSDARG00000035694 1567 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
2. fmnl2b ENSDARG00000075041 1744 2.843 0.905 - 0.965 - 0.973 - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
3. si:ch211-80h18.1 ENSDARG00000078522 1941 2.663 - - - 0.843 - - - 0.897 0.923 si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
4. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 2.603 0.927 0.707 0.969 - - - - - - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
5. cldna ENSDARG00000069888 712 2.57 - - - 0.885 0.767 - - - 0.918 claudin a [Source:ZFIN;Acc:ZDB-GENE-010328-1]
6. CR382327.1 ENSDARG00000088739 56 2.569 - - - 0.774 - - - 0.893 0.902
7. tnnc1a ENSDARG00000011400 165 2.457 - - - - - 1.000 - 0.722 0.735 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
8. luc7l ENSDARG00000055903 3357 2.407 0.775 0.708 0.924 - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
9. COL9A1 COL9A1 264 2.383 - - - 0.730 - - - 0.748 0.905
10. MEX3D MEX3D 293 1.994 - - - - 0.994 1.000 - - -
11. itgb1b ENSDARG00000104484 51 1.983 0.983 - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
12. ftsjd2 ftsjd2 2694 1.942 - - 0.949 - 0.993 - - - -
13. sipa1l2 ENSDARG00000061640 4545 1.926 - - 0.952 - 0.974 - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
14. c1ql3a ENSDARG00000010350 179 1.921 - - - - - 1.000 0.921 - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
15. safb ENSDARG00000020467 5608 1.902 - - 0.940 - 0.962 - - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
16. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.901 0.927 - 0.974 - - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
17. dscr3 1229 1.89 0.921 - 0.969 - - - - - - Down syndrome critical region 3
18. rbm25 rbm25 3629 1.867 0.944 - 0.923 - - - - - -
19. fank1 ENSDARG00000039657 9 1.865 - - - - - 1.000 0.865 - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
20. wu:fb12e11 wu:fb12e11 2332 1.862 0.889 - 0.973 - - - - - -
21. clstn1 ENSDARG00000031720 5286 1.843 - - 0.906 - 0.937 - - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
22. pola2 ENSDARG00000015070 2286 1.839 - 0.865 0.974 - - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
23. rassf10a 417 1.835 0.913 - - - - - 0.922 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
24. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.835 0.859 - 0.976 - - - - - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
25. thbs1b ENSDARG00000010785 3095 1.834 0.856 - 0.978 - - - - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
26. egln2 ENSDARG00000062562 2500 1.832 - 0.858 0.974 - - - - - - egl-9 family hypoxia-inducible factor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-757]
27. cand1 ENSDARG00000017841 8164 1.807 - - 0.822 - 0.985 - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
28. BX321870.1 ENSDARG00000098519 9 1.806 - - - - - 1.000 0.806 - -
29. CR848763.1 CR848763.1 9 1.806 - - - - - 1.000 0.806 - -
30. CU302326.3 CU302326.3 6 1.806 - - - - - 1.000 0.806 - -
31. otomp ENSDARG00000040306 682 1.802 - - - 0.850 - - - - 0.952 otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
32. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1.8 - - - - - 1.000 0.800 - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
33. fbl ENSDARG00000053912 5891 1.79 0.848 - 0.942 - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
34. CR352265.1 ENSDARG00000062758 39 1.774 - - - - - - - 0.879 0.895
35. tnni1b ENSDARG00000052708 478 1.771 - - - - - 1.000 - - 0.771 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
36. xpnpep1 ENSDARG00000029011 1723 1.766 0.802 - 0.964 - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
37. rhot1a ENSDARG00000099996 2059 1.766 - 0.777 - - 0.989 - - - - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
38. gars ENSDARG00000059070 17015 1.759 - - 0.861 - 0.898 - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
39. ddrgk1_1 ENSDARG00000037172 1563 1.748 0.958 0.790 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
40. si:ch211-214e3.5 ENSDARG00000074270 755 1.743 0.954 0.789 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
41. irf2a ENSDARG00000007387 915 1.742 - 0.759 0.983 - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
42. entpd2a.2 ENSDARG00000033953 389 1.74 0.961 0.779 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
43. esr2b ENSDARG00000034181 20 1.739 - - - - - 1.000 0.739 - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
44. si:dkey-25i10.5 si:dkey-25i10.5 18 1.739 - - - 0.739 - 1.000 - - -
45. ccdc127a 39 1.739 - - - - - 1.000 0.739 - - coiled-coil domain containing 127a, transcript variant X2
46. nle1 ENSDARG00000057105 522 1.734 0.985 0.749 - - - - - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
47. fhl2b ENSDARG00000003991 32 1.732 - - - - - 0.881 0.851 - - four and a half LIM domains 2b [Source:ZFIN;Acc:ZDB-GENE-041010-121]
48. zgc:100918 ENSDARG00000087243 5451 1.728 0.872 - 0.856 - - - - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
49. gigfy2 3194 1.726 0.769 - 0.957 - - - - - - GRB10 interacting GYF protein 2, transcript variant X1
50. cks1b ENSDARG00000007971 2739 1.724 0.784 - 0.940 - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
51. hps5 ENSDARG00000071062 273 1.72 0.955 - - - - - 0.765 - - Hermansky-Pudlak syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-070410-80]
52. bcat2 ENSDARG00000054849 4317 1.718 0.791 - 0.927 - - - - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
53. SBSPON ENSDARG00000110160 2 1.717 - - - - - 1.000 - 0.717 - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
54. pmm2 ENSDARG00000037654 1783 1.712 0.722 - - - 0.990 - - - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
55. SP5 SP5 8 1.705 - - - 0.816 - - - 0.889 -
56. s100s ENSDARG00000036773 90 1.705 - - - - - - - 0.860 0.845 S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
57. CZv9_NA429H14orf28 CZv9_NA429H14orf28 157 1.703 0.931 - - - - - 0.772 - -
58. wu:fb52c12 wu:fb52c12 763 1.7 - 0.722 0.978 - - - - - -
59. TMEM220 ENSDARG00000088981 28 1.699 0.982 - - - - - - 0.717 - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
60. hat1 ENSDARG00000034916 5712 1.698 - 0.770 - - 0.928 - - - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
61. BX323045.3 BX323045.3 1044 1.694 - 0.718 0.976 - - - - - -
62. pole ENSDARG00000058533, ENSDARG00000115430 381 1.687 0.979 0.708 - - - - - - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
63. pou3f3a ENSDARG00000042032 2835 1.68 - - 0.926 - 0.754 - - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
64. CT990561.1 ENSDARG00000058284 566 1.673 - - 0.955 - - - - - 0.718 EPH receptor A5 [Source:NCBI gene;Acc:797595]
65. CABZ01074181.1 CABZ01074181.1 396 1.664 0.804 - - - - - 0.860 - -
66. rorb ENSDARG00000033498 544 1.66 0.942 - - 0.718 - - - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
67. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.654 - - 0.831 - 0.823 - - - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
68. aff2 ENSDARG00000052242 540 1.654 0.948 - - - - - 0.706 - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
69. hnrpl 6412 1.652 - 0.809 - - 0.843 - - - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
70. foxg1c ENSDARG00000068380, ENSDARG00000114414 25 1.645 - - - - - - 0.733 - 0.912 forkhead box G1c [Source:ZFIN;Acc:ZDB-GENE-050419-26]
71. dyx1c1 dyx1c1 36 1.643 - - - - - 0.873 0.770 - -
72. si:ch211-161h7.4 ENSDARG00000087238 4399 1.63 0.851 - 0.779 - - - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
73. USMG5 USMG5 10356 1.623 - - 0.704 - 0.919 - - - -
74. fam83b ENSDARG00000078309 318 1.605 0.829 0.776 - - - - - - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
75. TMEM14A ENSDARG00000095157 611 1.598 0.867 0.731 - - - - - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
76. il10 ENSDARG00000078147 3 1.593 - - - - - 0.787 0.806 - - interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
77. prdx2 ENSDARG00000025350 11194 1.587 - - 0.745 - 0.842 - - - - peroxiredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-030326-2]
78. CLDN22 CLDN22 114 1.585 - - - 0.767 - - - 0.818 -
79. si:dkey-173l11.3 si:dkey-173l11.3 14 1.582 - 0.776 - - - - 0.806 - -
80. CR677591.1 CR677591.1 19 1.582 - - - - - - 0.788 0.794 -
81. dock11 ENSDARG00000062485 17 1.571 - - - 0.765 - - 0.806 - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
82. si:ch73-343l4.2 ENSDARG00000079903 10 1.569 - - - 0.801 - 0.768 - - - si:ch73-343l4.2 [Source:ZFIN;Acc:ZDB-GENE-090313-154]
83. TNFRSF11B ENSDARG00000098377 98 1.569 - 0.782 - - - - 0.787 - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
84. zgc:193742 ENSDARG00000092387, ENSDARG00000115140, ENSDARG00000116906 653 1.562 0.856 0.706 - - - - - - - zgc:193742 [Source:ZFIN;Acc:ZDB-GENE-081022-37]
85. qki2 ENSDARG00000010018 2230 1.555 0.730 0.825 - - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
86. dcps ENSDARG00000009862 571 1.549 - 0.805 - - - - 0.744 - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
87. si:dkey-11c5.11 ENSDARG00000096637 130 1.527 - - - - - 0.825 0.702 - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
88. coch ENSDARG00000024032 7 1.523 - - - - - - 0.806 0.717 - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
89. CABZ01049058.1 CABZ01049058.1 7 1.518 - - - 0.801 - - - 0.717 -
90. si:ch211-188i4.4 5 1.518 - - - 0.801 - - - 0.717 - si:ch211-188i4.4, transcript variant X3
91. elavl2 ENSDARG00000040732 44 1.515 - 0.776 - - - - 0.739 - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
92. CR376787.1 CR376787.1 10 1.511 - - - - - 0.705 0.806 - -
93. GPR137B_1 GPR137B_1 8 1.498 - - - 0.765 - - - 0.733 -
94. si:dkey-211i20.3 si:dkey-211i20.3 1 1.493 - - - 0.776 - - - 0.717 -
95. dnajc5b ENSDARG00000058147 6 1.491 - - - - - - - 0.732 0.759 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
96. foxg1a ENSDARG00000070769 928 1.488 - - - 0.713 - 0.775 - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
97. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.487 - - - 0.777 - - - 0.710 - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
98. cldnj ENSDARG00000058880 59 1.467 - - - 0.719 - - - 0.748 - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
99. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
100. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - - - - 1.000 - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]

There are 1971 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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