Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for stk11

Gene Name Gene ID Reads Annotation
stk11 ENSDARG00000046074 506 serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]










Genes with expression patterns similar to stk11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. stk11 ENSDARG00000046074 506 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
2. TM2D2 ENSDARG00000035515 561 1.777 - 0.935 - - - - 0.842 - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
3. lonp1 ENSDARG00000102765 507 1.702 - 0.958 - - - - 0.744 - - lon peptidase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4006]
4. slc25a11 ENSDARG00000035741 3377 1.678 - 0.903 - - - - 0.775 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
5. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 1.608 - 0.838 - - - - 0.770 - - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
6. ppme1 ENSDARG00000009771 1697 1.602 - 0.889 - - - - 0.713 - - protein phosphatase methylesterase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7064]
7. PRIM2 ENSDARG00000052721 825 1.598 - 0.898 - - - - 0.700 - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
8. dedd1 ENSDARG00000002758 932 1.582 - 0.840 - - - - 0.742 - - death effector domain-containing 1 [Source:ZFIN;Acc:ZDB-GENE-000616-2]
9. tmem50a ENSDARG00000015757 3244 1.573 - 0.748 - - - - 0.825 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
10. grhl3 ENSDARG00000078552 897 1.568 - 0.822 - - - 0.746 - - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
11. NIPBL NIPBL 871 1.516 - 0.792 - - - - 0.724 - -
12. NUDT12 ENSDARG00000100813 378 1.485 - 0.783 - - - - 0.702 - - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
13. HDAC5 ENSDARG00000075139 1287 1.484 - 0.774 - - - 0.710 - - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
14. emc4 ENSDARG00000039268 553 1.477 - 0.739 - - - - 0.738 - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
15. UTP20 ENSDARG00000099280 1672 1.459 - 0.731 - - - - 0.728 - - UTP20 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-080225-38]
16. zgc:136851 zgc:136851 315 1.457 0.749 0.708 - - - - - - -
17. bag1 ENSDARG00000020895 1660 1.433 - 0.726 - - - - 0.707 - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
18. dram2b ENSDARG00000044241 503 1.427 0.705 0.722 - - - - - - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
19. ATP5J 343 0.975 - 0.975 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
20. rab33ba ENSDARG00000052290 914 0.956 - 0.956 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
21. tspan5b ENSDARG00000070449 1056 0.954 - 0.954 - - - - - - - tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
22. fam57ba ENSDARG00000026875 504 0.952 - 0.952 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
23. pnpla2 ENSDARG00000089390 129 0.95 - 0.950 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
24. plce1 ENSDARG00000087921 44 0.95 - 0.950 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
25. sh3pxd2aa ENSDARG00000060148 913 0.949 - 0.949 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
26. BX005256.1 ENSDARG00000106112 467 0.948 - 0.948 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
27. ormdl2 ENSDARG00000058022 1146 0.947 - 0.947 - - - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
28. NUDT8 ENSDARG00000007722 329 0.947 - 0.947 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
29. zgc:109744 ENSDARG00000070800 262 0.946 - 0.946 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
30. pc pc 116 0.945 - 0.945 - - - - - - -
31. gpam ENSDARG00000074169 488 0.945 - 0.945 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
32. si:dkeyp-123a12.2 ENSDARG00000115029 78 0.944 - 0.944 - - - - - - - si:dkeyp-123a12.2 [Source:ZFIN;Acc:ZDB-GENE-041210-271]
33. CABZ01114089.1 CABZ01114089.1 127 0.943 - 0.943 - - - - - - -
34. btbd6a ENSDARG00000076440 748 0.943 - 0.943 - - - - - - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
35. foxn4 ENSDARG00000010591 2332 0.942 - 0.942 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
36. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.941 - 0.941 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
37. UBASH3B UBASH3B 292 0.941 - 0.941 - - - - - - -
38. tex261 ENSDARG00000044584 513 0.94 - 0.940 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
39. wdr18 ENSDARG00000041113 810 0.939 - 0.939 - - - - - - - WD repeat domain 18 [Source:ZFIN;Acc:ZDB-GENE-040905-4]
40. TEAD1 TEAD1 43 0.939 - 0.939 - - - - - - -
41. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.938 - 0.938 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
42. CT573322.1 CT573322.1 38 0.938 - 0.938 - - - - - - -
43. CR388047.3 ENSDARG00000117023 89 0.938 - 0.938 - - - - - - -
44. ddx51 ENSDARG00000025854 691 0.937 - 0.937 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Source:ZFIN;Acc:ZDB-GENE-040927-28]
45. usp45 ENSDARG00000075013 227 0.936 - 0.936 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
46. cd74a ENSDARG00000009087 20 0.936 - 0.936 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
47. casp2 ENSDARG00000062052 559 0.936 - 0.936 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
48. pcnx 689 0.936 - 0.936 - - - - - - - pecanex homolog (Drosophila), transcript variant X5
49. smdt1 smdt1 99 0.935 - 0.935 - - - - - - -
50. cacng6a ENSDARG00000036457 344 0.935 - 0.935 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
51. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.935 - 0.935 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
52. snupn ENSDARG00000008395 507 0.935 - 0.935 - - - - - - - snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]
53. ckap5 ENSDARG00000102674 5068 0.935 - 0.935 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
54. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.934 - 0.934 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
55. si:ch211-105d18.6 si:ch211-105d18.6 59 0.934 - 0.934 - - - - - - -
56. sdf2 ENSDARG00000024026 805 0.933 - 0.933 - - - - - - - stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]
57. si:ch1073-155h21.1 ENSDARG00000007582 137 0.932 - 0.932 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
58. cox11 ENSDARG00000061004, ENSDARG00000115002 423 0.932 - 0.932 - - - - - - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
59. kcnk13a ENSDARG00000008212 136 0.932 - 0.932 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
60. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.93 - 0.930 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
61. si:dkey-154p10.3 ENSDARG00000068366 153 0.929 - 0.929 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
62. MAP3K2 ENSDARG00000062884 34 0.929 - 0.929 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
63. spock3 ENSDARG00000070266, ENSDARG00000110158 934 0.928 - 0.928 - - - - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
64. ppapdc2 ppapdc2 67 0.927 - 0.927 - - - - - - -
65. unc13d ENSDARG00000078249 91 0.927 - 0.927 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
66. C12H10orf2 C12H10orf2 245 0.926 - 0.926 - - - - - - -
67. CR376783.1 ENSDARG00000074235 259 0.926 - 0.926 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
68. SLC38A9 ENSDARG00000032769 35 0.925 - 0.925 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
69. trmt1l ENSDARG00000042057 466 0.925 - 0.925 - - - - - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
70. ABTB2 ABTB2 584 0.924 - 0.924 - - - - - - -
71. si:ch211-39a7.1 ENSDARG00000037427 31 0.923 - 0.923 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
72. ZP2 ZP2 14 0.923 - 0.923 - - - - - - -
73. CABZ01109624.1 CABZ01109624.1 25 0.923 - 0.923 - - - - - - -
74. U3_5 U3_5 67 0.923 - 0.923 - - - - - - -
75. si:dkey-228i19.34 si:dkey-228i19.34 43 0.923 - 0.923 - - - - - - -
76. fam63b 484 0.923 - 0.923 - - - - - - - family with sequence similarity 63, member B
77. CABZ01066717.1 CABZ01066717.1 351 0.923 - 0.923 - - - - - - -
78. stx5a ENSDARG00000025033, ENSDARG00000112598 380 0.922 - 0.922 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
79. tbcelb ENSDARG00000019525 299 0.922 - 0.922 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
80. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.921 - 0.921 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
81. ACKR3 ACKR3 235 0.921 - 0.921 - - - - - - -
82. alg9 ENSDARG00000012840 631 0.92 - 0.920 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
83. pgap2 ENSDARG00000044596 60 0.92 - 0.920 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
84. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.92 - 0.920 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
85. six2a ENSDARG00000058004, ENSDARG00000115214 414 0.918 - 0.918 - - - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
86. rnf34a ENSDARG00000038300 179 0.918 - 0.918 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
87. RBMS1 RBMS1 258 0.918 - 0.918 - - - - - - -
88. esrrd ENSDARG00000015064 291 0.917 - 0.917 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
89. lrrc6 ENSDARG00000053318 146 0.917 - 0.917 - - - - - - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
90. si:dkey-114b16.4 si:dkey-114b16.4 35 0.917 - 0.917 - - - - - - -
91. cflara ENSDARG00000055966 464 0.916 - 0.916 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
92. cyp2aa1 ENSDARG00000099003 297 0.916 - 0.916 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
93. FRRS1_1 FRRS1_1 831 0.916 - 0.916 - - - - - - -
94. casp3b ENSDARG00000055045 54 0.915 - 0.915 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
95. RNF130 ENSDARG00000089767 559 0.915 - 0.915 - - - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
96. si:ch211-215d8.2 ENSDARG00000093233 784 0.915 - 0.915 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
97. nfu1 ENSDARG00000068125 1743 0.914 - 0.914 - - - - - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
98. hoxc6a ENSDARG00000070343 2839 0.913 - 0.913 - - - - - - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
99. yaf2 ENSDARG00000015966 1905 0.913 - 0.913 - - - - - - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
100. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.912 - 0.912 - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]

There are 693 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA