Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ssrp1b

Gene Name Gene ID Reads Annotation
ssrp1b ENSDARG00000016994 58 structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]










Genes with expression patterns similar to ssrp1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssrp1b ENSDARG00000016994 58 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]
2. CU633991.1 CU633991.1 16 1.88 - - - - 0.880 - 1.000 - -
3. IQCG ENSDARG00000068678 77 1.861 - - - - - 0.861 1.000 - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
4. SLC2A4RG SLC2A4RG 47 1.857 - - - - - 0.857 1.000 - -
5. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 1.845 - - - - - 0.845 1.000 - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
6. SLC7A8 SLC7A8 25 1.817 - - - - - 0.817 1.000 - -
7. atad1a ENSDARG00000023267 155 1.808 0.961 - - - - 0.847 - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
8. slc27a6 ENSDARG00000046053 57 1.76 0.903 - - - - 0.857 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
9. si:ch211-222k6.3 ENSDARG00000071578 127 1.726 0.971 - - - - 0.755 - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
10. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1.722 - - - - - 0.722 1.000 - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
11. WAPAL_1 WAPAL_1 205 1.722 0.851 - - - - 0.871 - - -
12. adprm ENSDARG00000026090 91 1.715 0.948 - - - - 0.767 - - - ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent [Source:ZFIN;Acc:ZDB-GENE-040426-1406]
13. slc6a6a ENSDARG00000012534 183 1.697 0.882 - - - - 0.815 - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
14. fpr1 ENSDARG00000042984 66 1.679 0.896 - - - - 0.783 - - - formyl peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-121227-2]
15. si:dkey-211g8.5 ENSDARG00000092259 224 1.669 0.710 - - - - - 0.959 - - si:dkey-211g8.5 [Source:ZFIN;Acc:ZDB-GENE-060503-718]
16. si:dkey-4c15.12 ENSDARG00000095350 119 1.664 0.879 - - - - 0.785 - - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
17. zgc:174696 ENSDARG00000110658 67 1.577 - - - - - 0.857 0.720 - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
18. CR848836.5 CR848836.5 42 1.577 - - - - - 0.818 0.759 - -
19. fnbp1l ENSDARG00000020131 79 1.572 - - - - - 0.836 0.736 - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
20. CLSTN2 ENSDARG00000060637 41 1.567 - - - - 0.745 0.822 - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
21. dync2i1 dync2i1 83 1.565 - - - - - 0.820 0.745 - -
22. trpm4 trpm4 501 1.544 0.732 - - - - 0.812 - - -
23. C10H11orf63 C10H11orf63 65 1.543 - - - - 0.735 - 0.808 - -
24. dckl1b dckl1b 115 1.543 0.728 - - - - 0.815 - - -
25. pgap1 ENSDARG00000062465 30 1.53 - - - - 0.711 0.819 - - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
26. TULP2 TULP2 38 1.506 - - - - 0.701 - 0.805 - -
27. UBAC2 ENSDARG00000093065, ENSDARG00000116281, ENSDARG00000116596 16 1.494 - - 0.705 - - 0.789 - - - UBA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-2122]
28. AL929007.2 AL929007.2 117 1.434 - - 0.730 - - 0.704 - - -
29. dnph1 ENSDARG00000075730 403 1.41 0.702 - - - - 0.708 - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
30. si:dkey-114e9.1 si:dkey-114e9.1 233 1 - - - - - - 1.000 - -
31. tmprss13b ENSDARG00000077573 47 1 - - - - - - 1.000 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
32. RNF122 RNF122 29 1 - - - - - - 1.000 - -
33. si:rp71-1f1.6 ENSDARG00000110278 0 1 - - - - - - 1.000 - - si:rp71-1f1.6 [Source:ZFIN;Acc:ZDB-GENE-040724-256]
34. BX640584.1 ENSDARG00000100855 1 1 - - - - - - 1.000 - -
35. PEG3_10 PEG3_10 45 1 - - - - - - 1.000 - -
36. znf330 ENSDARG00000020494 3 1 - - - - - - 1.000 - - zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]
37. CR936442.1 ENSDARG00000105592 2 1 - - - - - - 1.000 - -
38. VDAC3 ENSDARG00000003695 34 1 - - - - - - 1.000 - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
39. CABZ01084564.1 ENSDARG00000045137 0 1 - - - - - - 1.000 - - histamine H3 receptor-like [Source:NCBI gene;Acc:100331077]
40. si:dkeyp-80d11.12 ENSDARG00000101728 4 1 - - - - - - 1.000 - - si:dkeyp-80d11.12 [Source:ZFIN;Acc:ZDB-GENE-070424-273]
41. zmat4b ENSDARG00000061419 7 1 - - - - - - 1.000 - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
42. manba ENSDARG00000008238 25 1 - - - - - - 1.000 - - mannosidase, beta A, lysosomal [Source:ZFIN;Acc:ZDB-GENE-040426-721]
43. CR753886.1 ENSDARG00000090548 22 1 - - - - - - 1.000 - - prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765]
44. si:ch211-280c20.7 si:ch211-280c20.7 1 1 - - - - - - 1.000 - -
45. LRRC2 LRRC2 23 1 - - - - - - 1.000 - -
46. tmem174 ENSDARG00000035388 2 1 - - - - - - 1.000 - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
47. pde6b ENSDARG00000011671 44 1 - - - - - - 1.000 - - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
48. lsm14b ENSDARG00000025386 23 1 - - - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
49. CR790369.2 CR790369.2 0 1 - - - - - - 1.000 - -
50. reep6 ENSDARG00000087349 0 1 - - - - - - 1.000 - - receptor accessory protein 6 [Source:ZFIN;Acc:ZDB-GENE-040912-98]
51. pls1 ENSDARG00000039272 39 1 - - - - - - 1.000 - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
52. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
53. FP102169.1 ENSDARG00000110967 1 1 - - - - - - 1.000 - - secreted frizzled-related protein 5-like [Source:NCBI gene;Acc:101884738]
54. sema3h ENSDARG00000042616 75 1 - - - - - - 1.000 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
55. OVOL1 75 1 - - - - - - 1.000 - - ovo-like zinc finger 1, transcript variant X1
56. rhobtb2b ENSDARG00000089340 4 1 - - - - - - 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
57. BBX ENSDARG00000012699 79 1 - - - - - - 1.000 - - bobby sox homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-091204-306]
58. si:ch211-186e20.7 ENSDARG00000077960 1 1 - - - - - - 1.000 - - si:ch211-186e20.7 [Source:ZFIN;Acc:ZDB-GENE-110407-6]
59. ELFN2 ELFN2 7 1 - - - - - - 1.000 - -
60. zgc:92249 14 1 - - - - - - 1.000 - - zgc:92249
61. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - - - 1.000 - -
62. zgc:112242 11 1 - - - - - - 1.000 - - zgc:112242
63. CABZ01087853.1 CABZ01087853.1 3 1 - - - - - - 1.000 - -
64. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - 1.000 - -
65. retsatl ENSDARG00000034989 41 1 - - - - - - 1.000 - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
66. zgc:172271 ENSDARG00000013240 2 1 - - - - - - 1.000 - - zgc:172271 [Source:ZFIN;Acc:ZDB-GENE-080204-110]
67. tph2 ENSDARG00000057239, ENSDARG00000109777 55 1 - - - - - - 1.000 - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
68. RBBP6_10 RBBP6_10 0 1 - - - - - - 1.000 - -
69. U6_18 U6_18 12 1 - - - - - - 1.000 - -
70. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - - 1.000 - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
71. si:dkey-220o21.3 ENSDARG00000103079 1 1 - - - - - - 1.000 - - si:dkey-220o21.3 [Source:ZFIN;Acc:ZDB-GENE-110914-75]
72. si:dkey-66g10.2 ENSDARG00000092845 28 1 - - - - - - 1.000 - - si:dkey-66g10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-321]
73. ak7b ENSDARG00000017023 25 1 - - - - - - 1.000 - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
74. si:dkey-28d5.2 si:dkey-28d5.2 2 1 - - - - - - 1.000 - -
75. ela2 ENSDARG00000056744, ENSDARG00000111667 73 1 - - - - - - 1.000 - - elastase 2 [Source:ZFIN;Acc:ZDB-GENE-041117-1]
76. si:dkey-176g4.5 si:dkey-176g4.5 4 1 - - - - - - 1.000 - -
77. si:dkey-30j10.5 ENSDARG00000093186 13 1 - - - - - - 1.000 - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
78. tpbgl ENSDARG00000114338 5 1 - - - - - - 1.000 - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
79. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
80. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - - 1.000 - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
81. cttnbp2nl cttnbp2nl 166 1 - - - - - - 1.000 - -
82. si:dkey-1h24.6 ENSDARG00000092653 13 1 - - - - - - 1.000 - - si:dkey-1h24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-103]
83. si:ch211-235f1.3 ENSDARG00000095179 27 1 - - - - - - 1.000 - - si:ch211-235f1.3 [Source:ZFIN;Acc:ZDB-GENE-091204-440]
84. grn1 ENSDARG00000089362 20 1 - - - - - - 1.000 - - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
85. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - 1.000 - -
86. CT030712.1 ENSDARG00000044355 83 1 - - - - - - 1.000 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
87. il34 ENSDARG00000091003 14 1 - - - - - - 1.000 - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
88. col17a1a ENSDARG00000069415 52 1 - - - - - - 1.000 - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
89. arsk ENSDARG00000059714, ENSDARG00000115105 31 1 - - - - - - 1.000 - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
90. mb21d1 ENSDARG00000021572 12 1 - - - - - - 1.000 - - Mab-21 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-23]
91. si:ch211-220i18.4 ENSDARG00000030262 10 1 - - - - - - 1.000 - - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
92. themis ENSDARG00000010619 5 1 - - - - - - 1.000 - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
93. BX088653.4 BX088653.4 0 1 - - - - - - 1.000 - -
94. bckdhb ENSDARG00000014676 17 1 - - - - - - 1.000 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
95. DLK1 60 1 - - - - - - 1.000 - - delta like non-canonical Notch ligand 1
96. styx ENSDARG00000057699 48 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
97. AP5Z1 ENSDARG00000078111 91 1 - - - - - - 1.000 - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
98. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
99. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - 1.000 - -
100. CABZ01054405.2 CABZ01054405.2 46 1 - - - - - - 1.000 - -

There are 1121 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA