Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ssh1b

Gene Name Gene ID Reads Annotation
ssh1b ENSDARG00000010031 4 slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]










Genes with expression patterns similar to ssh1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssh1b ENSDARG00000010031 4 4 1.000 - 1.000 1.000 - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
2. ciita ENSDARG00000090851 5 2 1.000 - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
3. SOX8 SOX8 22 2 1.000 - - - - 1.000 - - -
4. si:dkey-217m5.3 si:dkey-217m5.3 22 2 1.000 - - - - 1.000 - - -
5. CU984579.1 ENSDARG00000116863 15 1.956 1.000 - - - - 0.956 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
6. CABZ01078481.1 CABZ01078481.1 6 1.884 1.000 - 0.884 - - - - - -
7. sycp1 ENSDARG00000003904 8 1.877 1.000 - - - - 0.877 - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
8. si:zfos-979f1.2 ENSDARG00000011652 24 1.877 1.000 - - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
9. si:dkey-267i17.3 si:dkey-267i17.3 4 1.857 1.000 - 0.857 - - - - - -
10. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.822 0.915 - - - - 0.907 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
11. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1.797 1.000 - 0.797 - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
12. CCDC18 ENSDARG00000078822 5 1.72 1.000 - - 0.720 - - - - - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
13. si:ch211-170d12.2 si:ch211-170d12.2 1 1.72 1.000 - - 0.720 - - - - -
14. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.713 1.000 - - 0.713 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
15. pax6l pax6l 54 1.583 - - 0.870 - - 0.713 - - -
16. FP103003.1_1 FP103003.1_1 6 1.55 - - 0.830 0.720 - - - - -
17. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - 1.000 - - -
18. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
19. mirlet7f 1 1 - - - - - 1.000 - - - microRNA let7f
20. sele ENSDARG00000009123 122 1 1.000 - - - - - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
21. Metazoa_SRP_24 Metazoa_SRP_24 4 1 1.000 - - - - - - - -
22. zp2.5 ENSDARG00000086522 15 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
23. vipr1b ENSDARG00000059058 62 1 1.000 - - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
24. fgf14 ENSDARG00000040982 5 1 - - - - - 1.000 - - - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
25. abcg1 ENSDARG00000063475 97 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
26. GRIN3B GRIN3B 16 1 1.000 - - - - - - - -
27. arl11l arl11l 31 1 1.000 - - - - - - - -
28. CU896555.1 CU896555.1 27 1 - - - - - 1.000 - - -
29. ZBTB40 ENSDARG00000091762 57 1 1.000 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
30. INSM2 ENSDARG00000020655 122 1 - - - - - 1.000 - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
31. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -
32. CU695006.2 CU695006.2 1 1 - - - - - 1.000 - - -
33. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1 1.000 - - - - - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
34. edn1 ENSDARG00000036912 74 1 1.000 - - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
35. gaa ENSDARG00000090714 19 1 1.000 - - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
36. rftn1a ENSDARG00000070831 5 1 1.000 - - - - - - - - raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
37. si:ch211-10p21.1 si:ch211-10p21.1 6 1 1.000 - - - - - - - -
38. aqp3b ENSDARG00000069518 80 1 1.000 - - - - - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
39. KIAA0319 KIAA0319 2 1 - - - - - 1.000 - - -
40. ovca2 ENSDARG00000103748 38 1 1.000 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
41. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
42. CR936540.2 CR936540.2 4 1 - - - - - 1.000 - - -
43. zap70 ENSDARG00000015752 1 1 1.000 - - - - - - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
44. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - - - - - 1.000 - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
45. olfcs2 ENSDARG00000100451 1 1 1.000 - - - - - - - - olfactory receptor C family, s2 [Source:ZFIN;Acc:ZDB-GENE-060503-238]
46. CU929230.1 ENSDARG00000030665 48 1 - - - - - 1.000 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
47. CCDC134_1 CCDC134_1 200 1 1.000 - - - - - - - -
48. HIST1H4J_4 HIST1H4J_4 9 1 1.000 - - - - - - - -
49. CABZ01006254.1 CABZ01006254.1 95 1 1.000 - - - - - - - -
50. samsn1b ENSDARG00000078647 8 1 - - - - - 1.000 - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
51. ano2 ENSDARG00000101363 50 1 1.000 - - - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
52. CU694374.3 CU694374.3 28 1 1.000 - - - - - - - -
53. cdc14aa ENSDARG00000013858 18 1 1.000 - - - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
54. adam10b ENSDARG00000015502 26 1 1.000 - - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
55. dcun1d5 ENSDARG00000100363 3 1 1.000 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
56. mir196b ENSDARG00000081346 35 1 - - - - - 1.000 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
57. si:ch211-267j24.2 si:ch211-267j24.2 7 1 - - - - - 1.000 - - -
58. rhoga ENSDARG00000068653 13 1 - - - - - 1.000 - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
59. hyal3 ENSDARG00000036818 23 1 - - - - - 1.000 - - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
60. abhd10a ENSDARG00000076435 3 1 1.000 - - - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
61. mettl21a ENSDARG00000012051 86 1 1.000 - - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
62. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - 1.000 - - -
63. SNORD89 SNORD89 1 1 1.000 - - - - - - - -
64. si:ch73-381f5.2 ENSDARG00000092723 1 1 1.000 - - - - - - - - si:ch73-381f5.2 [Source:ZFIN;Acc:ZDB-GENE-090311-25]
65. si:ch73-299h12.1 ENSDARG00000102321 233 1 1.000 - - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
66. BX088525.2 ENSDARG00000117222 11 1 1.000 - - - - - - - -
67. fermt3a fermt3a 56 1 1.000 - - - - - - - -
68. ifit2 ifit2 11 1 1.000 - - - - - - - -
69. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
70. gngt2b ENSDARG00000103543 132 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
71. nr2e1 ENSDARG00000017107 340 1 - - - - - 1.000 - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
72. sparcl1 ENSDARG00000074989 80 1 - - - - - 1.000 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
73. AL807829.1 AL807829.1 2 1 1.000 - - - - - - - -
74. GMEB2 ENSDARG00000093240 6 1 1.000 - - - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
75. si:dkey-286j17.4 ENSDARG00000093402 1 1 - - - - - 1.000 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
76. si:ch211-12h2.7 si:ch211-12h2.7 1 1 - - - - - 1.000 - - -
77. si:ch211-210h11.7 si:ch211-210h11.7 32 1 1.000 - - - - - - - -
78. pcdh1g2 ENSDARG00000101232 5 1 - - - - - 1.000 - - - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
79. DNAI2 DNAI2 6 1 - - - - - 1.000 - - -
80. si:ch211-160d20.5 ENSDARG00000089627 2 1 - - - - - 1.000 - - - si:ch211-160d20.5 [Source:ZFIN;Acc:ZDB-GENE-050420-242]
81. zgc:173652_1 4 1 - - - - - 1.000 - - - zgc:173652
82. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 1.000 - - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
83. ANKS1A ANKS1A 138 1 1.000 - - - - - - - -
84. crhbp ENSDARG00000024831 63 1 - - - - - 1.000 - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
85. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - - - 1.000 - - -
86. muc13b ENSDARG00000079647 67 1 1.000 - - - - - - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
87. si:ch1073-160m15.1 si:ch1073-160m15.1 74 1 1.000 - - - - - - - -
88. arhgap20 ENSDARG00000089326 10 1 - - - - - 1.000 - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
89. TAF4_1 TAF4_1 30 1 1.000 - - - - - - - -
90. CABZ01069081.1 CABZ01069081.1 16 1 1.000 - - - - - - - -
91. ddx26b 79 1 1.000 - - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
92. hoxc9a ENSDARG00000092809 18 1 1.000 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
93. has3 ENSDARG00000057210, ENSDARG00000116537 108 1 - - - - - 1.000 - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
94. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1 - - - - - 1.000 - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
95. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
96. wu:fy63c09 1 1 1.000 - - - - - - - - wu:fy63c09
97. agxtb ENSDARG00000018478 2 1 - - - - - 1.000 - - - alanine--glyoxylate and serine--pyruvate aminotransferase b [Source:ZFIN;Acc:ZDB-GENE-010302-3]
98. ZNF768 ZNF768 1 1 - - - - - 1.000 - - -
99. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - 1.000 - - -
100. ddx46 ENSDARG00000099458 24 1 - - - - - 1.000 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]

There are 565 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA