Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ssb

Gene Name Gene ID Reads Annotation
ssb ENSDARG00000029252 3394 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]










Genes with expression patterns similar to ssb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ssb ENSDARG00000029252 3394 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
2. mier1a ENSDARG00000041072 1690 2.462 - - - - - - 0.762 0.834 0.866 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
3. nop16 ENSDARG00000044402 3645 2.411 - - - - - 0.788 0.859 0.764 - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
4. snrnp70 ENSDARG00000077126 5921 2.371 - 0.815 - - - - - 0.749 0.807 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
5. kank2 ENSDARG00000018393 1804 2.36 - 0.734 - - - - 0.807 - 0.819 KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
6. tex10 ENSDARG00000055885 1229 2.351 - 0.802 - - - - 0.726 - 0.823 testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
7. apex1 ENSDARG00000045843 6345 2.294 - 0.879 0.702 - - - - 0.713 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
8. plcg1 ENSDARG00000038442 5324 2.287 - - - - - - 0.729 0.758 0.800 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
9. NOP14 ENSDARG00000098859 1288 2.248 - 0.775 - - - - 0.705 0.768 - NOP14 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9691]
10. fam173a ENSDARG00000041223, ENSDARG00000113102 639 2.211 - 0.714 - - - - 0.738 0.759 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
11. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.21 - 0.771 - - - - 0.717 - 0.722 eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
12. prmt1 ENSDARG00000010246 11311 1.746 - 0.886 - - - - - 0.860 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
13. pomp ENSDARG00000032296 4439 1.727 - 0.891 - - - - - - 0.836 proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
14. pes ENSDARG00000018902 3286 1.686 - 0.920 - - - - - - 0.766 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
15. mars ENSDARG00000034396 3618 1.681 - 0.831 - - - - - - 0.850 methionyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030219-83]
16. kif5c ENSDARG00000076027 424 1.669 - - - - - - - 0.850 0.819 kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
17. cwc25 ENSDARG00000003382 2134 1.669 - - - - - - - 0.792 0.877 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
18. supt6h ENSDARG00000006524 3221 1.666 - 0.837 - - - - - - 0.829 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
19. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.645 - - - - - - - 0.806 0.839 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
20. si:dkey-19e4.5 ENSDARG00000089886 2562 1.644 - - - - - - - 0.838 0.806 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
21. mrps2 ENSDARG00000103198 2410 1.644 - 0.793 - - - - - - 0.851 mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
22. Mar-07 Mar-07 2926 1.643 - 0.879 - - - - - 0.764 -
23. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.641 - 0.833 - - - - - 0.808 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
24. auh ENSDARG00000042975 1841 1.636 - 0.934 - - - - - 0.702 - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
25. daxx ENSDARG00000000729 734 1.632 - - - - - - - 0.820 0.812 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
26. RNASEH2C ENSDARG00000089637 1673 1.632 - - - - - - 0.789 - 0.843 ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
27. mrps18b ENSDARG00000007065 2121 1.631 - 0.818 - - - - - - 0.813 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
28. foxa1 ENSDARG00000102138 1797 1.626 - 0.839 - - - - - - 0.787 forkhead box A1 [Source:ZFIN;Acc:ZDB-GENE-990415-78]
29. fastkd2 ENSDARG00000074031 748 1.625 - 0.823 - - - - - - 0.802 FAST kinase domains 2 [Source:ZFIN;Acc:ZDB-GENE-090313-7]
30. CCDC106 CCDC106 1908 1.624 - - - - - - - 0.788 0.836
31. CCDC88C ENSDARG00000053713 1026 1.624 - 0.800 - - - - - - 0.824 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
32. dcaf13 ENSDARG00000002267 2435 1.624 - - - - - - 0.771 - 0.853 ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
33. yth2 yth2 3716 1.623 - 0.867 - - - - 0.756 - -
34. ube2nb ENSDARG00000045877 4583 1.616 - 0.850 - - - - 0.766 - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
35. knop1 ENSDARG00000077721 2198 1.616 - 0.819 - - - - - 0.797 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
36. actr1 ENSDARG00000011611 3879 1.615 - 0.810 - - - - - 0.805 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
37. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 1.615 - 0.814 - - - - - 0.801 - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
38. polr2k ENSDARG00000075616 2047 1.614 - - - - - - - 0.781 0.833 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
39. ptprk ENSDARG00000063416 742 1.61 - 0.826 - - - - - - 0.784 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
40. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.608 - - - - - - 0.818 - 0.790 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
41. ncalda ENSDARG00000070688 5069 1.607 - 0.805 - - - - - - 0.802 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
42. zgc:113348 ENSDARG00000103795 1351 1.607 0.774 - - - - - - - 0.833 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
43. melk ENSDARG00000030759 1150 1.606 - - - - - 0.788 - - 0.818 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
44. gse1 ENSDARG00000062020 2337 1.606 - 0.776 - - - - - - 0.830 Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
45. ctnnal1 ENSDARG00000018162 747 1.605 - - - - - - - 0.804 0.801 catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
46. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.598 - - - - - - - 0.888 0.710 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
47. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.596 - 0.776 - - - - - 0.820 - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
48. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 1.596 - 0.710 - - - - - - 0.886 polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
49. cdan1 ENSDARG00000042261 658 1.595 - - - - - - - 0.775 0.820 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
50. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.592 - - - - - - 0.804 0.788 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
51. phb2 phb2 3209 1.591 - 0.747 - - - - - - 0.844
52. pdcd11 ENSDARG00000052480 2791 1.591 - 0.771 - - - - - - 0.820 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
53. asap1a ENSDARG00000029463 1566 1.59 - 0.769 - - - - - 0.821 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
54. plagx ENSDARG00000036855 3768 1.587 - - - - - - - 0.745 0.842 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
55. oxsr1a ENSDARG00000034189 4314 1.586 - - - - - - 0.856 - 0.730 oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
56. hfe2 4113 1.585 - 0.843 - - - 0.742 - - - hemochromatosis type 2
57. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.585 - 0.845 - - - 0.740 - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
58. cct8 ENSDARG00000008243 6843 1.585 - 0.869 - - - 0.716 - - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
59. hdgfrp2 7462 1.585 - 0.837 - - - - - - 0.748 hepatoma-derived growth factor-related protein 2, transcript variant X1
60. rnd3a ENSDARG00000076799 4705 1.585 - 0.818 - - - - - 0.767 - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
61. uhrf1 ENSDARG00000103409 3282 1.582 - - - - - - - 0.738 0.844 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
62. sf3a1 ENSDARG00000041887 6702 1.581 0.702 - - - - - - 0.879 - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
63. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.581 - - - - - - 0.702 - 0.879 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
64. srsf6b ENSDARG00000016783 9926 1.579 - - - - - - - 0.730 0.849 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
65. nrp1a ENSDARG00000102153 4154 1.578 - - - - - - 0.772 - 0.806 neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
66. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 1.578 - 0.766 - - - - - - 0.812 polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
67. CABZ01028296.1 CABZ01028296.1 6203 1.578 - - - - - - - 0.735 0.843
68. sucla2 ENSDARG00000005359 5992 1.577 - 0.817 - - - 0.760 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
69. C3H19orf43 C3H19orf43 2961 1.574 - 0.784 - - - - - 0.790 -
70. nanos1 ENSDARG00000109337 2494 1.574 - - - - - - 0.726 0.848 - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
71. six1b ENSDARG00000026473 1908 1.574 - 0.817 - - - 0.757 - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
72. palm1b ENSDARG00000007818 2128 1.572 - - - - - - 0.755 - 0.817 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
73. brd3a ENSDARG00000006527 1636 1.572 - 0.738 - - - - - - 0.834 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
74. rpf2 ENSDARG00000043960 2719 1.57 - 0.853 - - - 0.717 - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
75. PARL 2511 1.568 - - - - - 0.759 - - 0.809 presenilin associated rhomboid like
76. CR388231.3 ENSDARG00000105601 2404 1.567 - 0.785 - - - - - 0.782 -
77. eya3 ENSDARG00000036100 1965 1.567 - - - - - - 0.716 - 0.851 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
78. WDFY3 ENSDARG00000078890 2092 1.566 - 0.772 - - - - 0.794 - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
79. znf280d ENSDARG00000077013 1387 1.563 - 0.735 - - - - - 0.828 - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
80. supt16h ENSDARG00000079949 4755 1.561 - 0.705 - - - - - - 0.856 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
81. etv1 ENSDARG00000101959 358 1.56 - - - - - - - 0.792 0.768 ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
82. hic1l ENSDARG00000045660 1489 1.558 0.776 - - - - - - - 0.782 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
83. PPP1R9B PPP1R9B 855 1.555 - 0.765 - - - - - 0.790 -
84. CABZ01111990.1 CABZ01111990.1 4374 1.553 - 0.756 - - - - - - 0.797
85. igdcc4 ENSDARG00000076919 1303 1.553 - 0.800 - - - - 0.753 - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
86. usp42 ENSDARG00000077300 926 1.55 0.771 0.779 - - - - - - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
87. olig2 ENSDARG00000040946 1405 1.548 - - - - - - - 0.720 0.828 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
88. dpf3 ENSDARG00000025309 1376 1.548 - 0.721 - - - - - - 0.827 D4, zinc and double PHD fingers, family 3 [Source:ZFIN;Acc:ZDB-GENE-041014-190]
89. dnajc19 ENSDARG00000044420 1756 1.546 - 0.836 - - - - - - 0.710 DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
90. mrpl27 ENSDARG00000032985 2158 1.545 - 0.837 - - - 0.708 - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
91. MAPRE2 ENSDARG00000099943 3041 1.545 - 0.785 - - - - - 0.760 - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
92. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.545 - 0.731 - - - - - - 0.814 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
93. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 1.544 - - - - - - 0.727 0.817 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
94. cbx3a ENSDARG00000003860 4922 1.543 - 0.776 - - - - - - 0.767 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
95. wdr12 ENSDARG00000003287 1026 1.542 - 0.757 - - - - - 0.785 - WD repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-030131-371]
96. ddx49 ENSDARG00000012899 1604 1.542 - 0.799 - - - 0.743 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
97. rpp38 ENSDARG00000040350 558 1.542 - 0.731 - - - - - 0.811 - ribonuclease P/MRP 38 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-258]
98. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 1.541 - - - - - 0.740 - - 0.801 ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
99. mir133b_1 671 1.541 - 0.806 - - - 0.735 - - - microRNA 133b
100. atf7ip ENSDARG00000069619 5495 1.539 - 0.774 - - - - - 0.765 - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]

There are 2047 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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