Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ss18l2

Gene Name Gene ID Reads Annotation
ss18l2 ENSDARG00000101085 748 synovial sarcoma translocation gene on chromosome 18-like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-268]










Genes with expression patterns similar to ss18l2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ss18l2 ENSDARG00000101085 748 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 synovial sarcoma translocation gene on chromosome 18-like 2 [Source:ZFIN;Acc:ZDB-GENE-050417-268]
2. fbxl3b ENSDARG00000021882 58 1.556 - 0.818 - - - 0.738 - - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
3. adam8b ENSDARG00000057644 108 1.517 - 0.786 - - - - 0.731 - - ADAM metallopeptidase domain 8b [Source:ZFIN;Acc:ZDB-GENE-070808-1]
4. BX469922.1 BX469922.1 133 1.504 - 0.772 - - - - 0.732 - -
5. BX005175.1 ENSDARG00000112442 441 1.481 0.745 - - - - - - 0.736 - protein kinase C, delta b [Source:NCBI gene;Acc:100150844]
6. ldlrad3 ENSDARG00000078600 926 1.481 - 0.766 - - - - - 0.715 - low density lipoprotein receptor class A domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1533]
7. rpp25l ENSDARG00000070131 492 1.458 0.713 0.745 - - - - - - - ribonuclease P/MRP 25 subunit-like [Source:ZFIN;Acc:ZDB-GENE-040718-275]
8. C5HXorf56 C5HXorf56 880 1.451 - - - - - 0.730 0.721 - -
9. rab42b ENSDARG00000101170, ENSDARG00000116456 294 0.923 - 0.923 - - - - - - - RAB42, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050417-172]
10. appb ENSDARG00000055543, ENSDARG00000109552 4461 0.911 - - - - - - - 0.911 - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
11. DUSP8 DUSP8 442 0.899 - 0.899 - - - - - - -
12. CT956064.4 CT956064.4 541 0.892 - 0.892 - - - - - - -
13. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 0.884 - 0.884 - - - - - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
14. cops4 ENSDARG00000043732 1508 0.878 - - - - - - 0.878 - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
15. sertad2a ENSDARG00000093412 503 0.876 - 0.876 - - - - - - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
16. RTKN RTKN 1537 0.872 - 0.872 - - - - - - -
17. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 0.872 - 0.872 - - - - - - - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
18. si:ch211-156j22.4 ENSDARG00000094977 4350 0.864 - - - - - - - 0.864 - si:ch211-156j22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-1968]
19. TRIM14_1 TRIM14_1 228 0.861 0.861 - - - - - - - -
20. traf2b ENSDARG00000101036 429 0.86 - 0.860 - - - - - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
21. ABHD17A_1 ABHD17A_1 504 0.859 0.859 - - - - - - - -
22. si:ch211-209j10.6 ENSDARG00000093317 126 0.851 - 0.851 - - - - - - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
23. fam98a ENSDARG00000078391, ENSDARG00000109752, ENSDARG00000110498 997 0.85 - 0.850 - - - - - - - family with sequence similarity 98, member A [Source:ZFIN;Acc:ZDB-GENE-091202-6]
24. si:rp71-36a1.5_1 ENSDARG00000077252, ENSDARG00000090882 93 0.849 - 0.849 - - - - - - - si:rp71-36a1.5 [Source:ZFIN;Acc:ZDB-GENE-091204-428]
25. cpsf5 cpsf5 1841 0.847 - - - - - 0.847 - - -
26. anapc4 ENSDARG00000032237 385 0.845 - 0.845 - - - - - - - anaphase promoting complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041212-10]
27. pcnt ENSDARG00000033012 664 0.845 - 0.845 - - - - - - - pericentrin [Source:ZFIN;Acc:ZDB-GENE-030829-26]
28. CU638868.1 ENSDARG00000115797 487 0.843 - 0.843 - - - - - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
29. blm ENSDARG00000077089 245 0.842 - 0.842 - - - - - - - Bloom syndrome, RecQ helicase-like [Source:ZFIN;Acc:ZDB-GENE-070702-5]
30. otud7b ENSDARG00000017220 886 0.841 - - - - - - 0.841 - - OTU deubiquitinase 7B [Source:ZFIN;Acc:ZDB-GENE-060616-1]
31. CSGALNACT1 CSGALNACT1 116 0.837 - 0.837 - - - - - - -
32. chico ENSDARG00000019588 77 0.836 - - - - - - 0.836 - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
33. slc5a6 slc5a6 224 0.836 - 0.836 - - - - - - -
34. tctex1d1 ENSDARG00000103545 409 0.834 - 0.834 - - - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
35. ei24 ENSDARG00000053840 78 0.834 - 0.834 - - - - - - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
36. ephx1l ephx1l 271 0.833 - 0.833 - - - - - - -
37. ensaa ENSDARG00000036944 685 0.832 - - - - - - 0.832 - - endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
38. ccdc101 ccdc101 778 0.832 - 0.832 - - - - - - -
39. zgc:171626 zgc:171626 42 0.829 - 0.829 - - - - - - -
40. OMA1 ENSDARG00000090503 19 0.829 - 0.829 - - - - - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
41. angptl6 ENSDARG00000020265 273 0.828 0.828 - - - - - - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
42. napg napg 645 0.828 - 0.828 - - - - - - -
43. zbtb3 ENSDARG00000036235 155 0.828 - 0.828 - - - - - - - zinc finger and BTB domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050506-105]
44. DIP2C DIP2C 222 0.826 - - - - - 0.826 - - -
45. CABZ01072096.1 ENSDARG00000079483 168 0.824 - 0.824 - - - - - - -
46. uba5 ENSDARG00000063588 1260 0.821 - - - - - 0.821 - - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
47. CR352290.2 CR352290.2 303 0.82 - 0.820 - - - - - - -
48. polr2k ENSDARG00000075616 2047 0.819 - - - - - - - 0.819 - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
49. E2F6 E2F6 1271 0.819 - - - - - - 0.819 - -
50. lrrc3ca ENSDARG00000079371 180 0.816 - 0.816 - - - - - - - leucine rich repeat containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080327-9]
51. rapgef5a ENSDARG00000075271 282 0.814 - - - - - - 0.814 - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
52. crb2b ENSDARG00000060081 144 0.814 - - - - - 0.814 - - - crumbs family member 2b [Source:ZFIN;Acc:ZDB-GENE-060610-1]
53. pde7a ENSDARG00000045305 545 0.813 0.813 - - - - - - - - phosphodiesterase 7A [Source:ZFIN;Acc:ZDB-GENE-031222-10]
54. golim4a ENSDARG00000100977, ENSDARG00000106760, ENSDARG00000113393 144 0.813 - 0.813 - - - - - - - golgi integral membrane protein 4a [Source:ZFIN;Acc:ZDB-GENE-041026-2]
55. stil ENSDARG00000024904, ENSDARG00000114288, ENSDARG00000116436 324 0.812 - - - - - - 0.812 - - scl/tal1 interrupting locus [Source:ZFIN;Acc:ZDB-GENE-020419-39]
56. wbp11 ENSDARG00000099151, ENSDARG00000101411 567 0.812 - - - - - 0.812 - - - WW domain binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-040426-1829]
57. paqr7a ENSDARG00000100462 15 0.811 - 0.811 - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
58. FRMD4B FRMD4B 359 0.811 - 0.811 - - - - - - -
59. atg10 ENSDARG00000104846 85 0.811 - 0.811 - - - - - - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
60. polr3e ENSDARG00000037358 1864 0.81 - - - - - 0.810 - - - polymerase (RNA) III (DNA directed) polypeptide E [Source:ZFIN;Acc:ZDB-GENE-030131-8462]
61. STARD5 ENSDARG00000076117 251 0.807 - 0.807 - - - - - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
62. si:dkey-98p3.7 si:dkey-98p3.7 147 0.807 0.807 - - - - - - - -
63. ABHD12B_1 ABHD12B_1 57 0.807 0.807 - - - - - - - -
64. cerkl ENSDARG00000079397 218 0.806 - - - - - 0.806 - - - ceramide kinase-like [Source:ZFIN;Acc:ZDB-GENE-070410-38]
65. LURAP1 ENSDARG00000044406, ENSDARG00000115301 938 0.806 - 0.806 - - - - - - - leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
66. mcu ENSDARG00000101175 1287 0.806 - 0.806 - - - - - - - mitochondrial calcium uniporter [Source:ZFIN;Acc:ZDB-GENE-061013-24]
67. tmed4 ENSDARG00000024954 3476 0.805 - - - - - - - 0.805 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
68. CLDN22 CLDN22 114 0.804 - 0.804 - - - - - - -
69. clasp1a ENSDARG00000010280 1158 0.804 - 0.804 - - - - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
70. CCDC106 CCDC106 1908 0.803 - - - - - - - 0.803 -
71. eef2a.1 ENSDARG00000042094 1781 0.803 - - - - - - - 0.803 - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
72. atg4c ENSDARG00000044373 979 0.802 - 0.802 - - - - - - - autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]
73. ppp6r2b ENSDARG00000069654 323 0.802 - 0.802 - - - - - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
74. pdlim2 ENSDARG00000069956 317 0.801 - 0.801 - - - - - - - PDZ and LIM domain 2 (mystique) [Source:ZFIN;Acc:ZDB-GENE-070308-4]
75. SH3PXD2A SH3PXD2A 177 0.801 - 0.801 - - - - - - -
76. stk36 ENSDARG00000061095 113 0.801 - 0.801 - - - - - - - serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
77. lpcat3 ENSDARG00000075178, ENSDARG00000109670 2713 0.801 - - - - - - - 0.801 - lysophosphatidylcholine acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041111-232]
78. gcc1 ENSDARG00000045541 1821 0.799 - - - - - - - 0.799 - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
79. havcr1 ENSDARG00000040178 73 0.799 - - - - - 0.799 - - - hepatitis A virus cellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-131]
80. pde6d ENSDARG00000074892, ENSDARG00000115562, ENSDARG00000115620 506 0.799 - - - - - - - 0.799 - phosphodiesterase 6D, cGMP-specific, rod, delta [Source:ZFIN;Acc:ZDB-GENE-040718-463]
81. MIS18BP1 ENSDARG00000042563 229 0.799 0.799 - - - - - - - - MIS18 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-151]
82. ddx39b ENSDARG00000036069 1151 0.798 - - - - - 0.798 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]
83. TDG TDG 1191 0.798 - 0.798 - - - - - - -
84. zgc:110377 zgc:110377 193 0.796 - 0.796 - - - - - - -
85. hsf2 ENSDARG00000053097 1188 0.796 - - - - - - - 0.796 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
86. zcrb1 ENSDARG00000045691 1741 0.795 - - - - - 0.795 - - - zinc finger CCHC-type and RNA binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-041210-114]
87. CR385081.1 CR385081.1 177 0.795 0.795 - - - - - - - -
88. slc2a12 ENSDARG00000036865, ENSDARG00000113590 148 0.794 - 0.794 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1513]
89. pspc1 ENSDARG00000006621 966 0.794 - - - - - - - 0.794 - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
90. SUOX ENSDARG00000091574 122 0.794 - - - - - 0.794 - - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
91. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 0.793 0.793 - - - - - - - - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
92. BX004890.2 BX004890.2 84 0.792 - 0.792 - - - - - - -
93. mmp24 ENSDARG00000018896 178 0.792 - 0.792 - - - - - - - matrix metallopeptidase 24 [Source:ZFIN;Acc:ZDB-GENE-040724-262]
94. rnd1 rnd1 1086 0.792 - 0.792 - - - - - - -
95. NGFR NGFR 186 0.791 - 0.791 - - - - - - -
96. shda ENSDARG00000094243 929 0.79 0.790 - - - - - - - - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
97. enthd2 481 0.79 - 0.790 - - - - - - - ENTH domain containing 2
98. SLC36A4 ENSDARG00000039661 175 0.789 - - - - - - 0.789 - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
99. LAMTOR4 ENSDARG00000045542 1181 0.787 - 0.787 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7438]
100. FEZ2 FEZ2 22 0.786 - 0.786 - - - - - - -

There are 456 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA