Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for srsf9

Gene Name Gene ID Reads Annotation
srsf9 ENSDARG00000008097 2405 serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]










Genes with expression patterns similar to srsf9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srsf9 ENSDARG00000008097 2405 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
2. ppig ENSDARG00000044431 3427 3.067 - 0.781 0.701 - 0.710 - - 0.875 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
3. zgc:174906 ENSDARG00000075314 2187 2.67 0.871 - - - - - - 0.941 0.858 zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
4. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 2.518 - - - - 0.767 - 0.822 0.929 - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
5. tmem127 ENSDARG00000030981 1389 2.45 - 0.779 - - - 0.732 - 0.939 - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
6. smarcd1 ENSDARG00000019004 6028 2.441 0.925 - - - - 0.759 - - 0.757 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
7. SMAD4 SMAD4 3233 2.409 0.812 - - - - - 0.710 - 0.887
8. patl1 ENSDARG00000017423 2744 2.401 0.860 - - - 0.756 0.785 - - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
9. srrm1 ENSDARG00000001244 4972 2.398 - - 0.713 - - - - 0.841 0.844 serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
10. huwe1 ENSDARG00000016782 6493 2.339 0.733 - - - - - 0.737 0.869 - HECT, UBA and WWE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-387]
11. rab5c ENSDARG00000026712 4733 2.33 0.749 - - - - - 0.756 0.825 - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
12. JMJD1C_1 JMJD1C_1 3094 2.318 0.843 - - - - - 0.748 - 0.727
13. mrps7 ENSDARG00000101622 889 2.289 - 0.701 - - 0.716 - - 0.872 - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
14. xpnpep1 ENSDARG00000029011 1723 2.278 0.768 - - - - - 0.779 - 0.731 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
15. wdfy1 ENSDARG00000005425 3628 2.275 0.728 - - 0.754 - - - - 0.793 WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
16. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 2.222 - 0.759 - - - - 0.703 - 0.760 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
17. rbmx ENSDARG00000014244 3445 2.194 0.720 0.744 0.730 - - - - - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
18. arhgef2 ENSDARG00000075819 2173 2.16 - 0.728 0.722 - - - 0.710 - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
19. tceb1a 969 1.81 0.884 - - - - - - 0.926 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
20. lrrc24 ENSDARG00000101704 224 1.791 0.867 - - - - - - 0.924 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
21. gpkow ENSDARG00000029612 1395 1.786 - - - - - - - 0.944 0.842 G patch domain and KOW motifs [Source:ZFIN;Acc:ZDB-GENE-030616-159]
22. abi1b ENSDARG00000062991 1564 1.745 0.856 - - - - - - - 0.889 abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
23. psd3l ENSDARG00000104820 1201 1.745 - - - - - - - 0.915 0.830 pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
24. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 1.736 - - - - 0.781 - - 0.955 - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
25. CR387996.1 ENSDARG00000097774 3037 1.729 0.885 - - - - - - - 0.844
26. vrk1 ENSDARG00000018006 1759 1.724 0.842 - - - - - - 0.882 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
27. fzd7b ENSDARG00000027589 2562 1.723 0.878 - - - - - - 0.845 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
28. arhgap1 ENSDARG00000024324 6904 1.721 - - - - 0.785 - - 0.936 - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
29. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.717 - - - 0.750 - - - 0.967 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
30. arid2 ENSDARG00000007413 4413 1.703 - - - - 0.803 - - 0.900 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
31. cxcr4a ENSDARG00000057633 1829 1.699 - - - - - 0.847 - 0.852 - chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
32. mybbp1a ENSDARG00000078214 2458 1.692 - - - - 0.757 - - 0.935 - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
33. golga7 ENSDARG00000057676 4691 1.686 - - - - - - 0.765 0.921 - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
34. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.68 - - - - - - - 0.829 0.851 small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
35. FOXK2 ENSDARG00000030583 5500 1.672 - - - - - - 0.748 - 0.924 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
36. ash2l ENSDARG00000060392 4916 1.662 0.811 - - - - - - - 0.851 ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
37. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 1.662 0.834 - - 0.828 - - - - - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
38. tfap4 ENSDARG00000103923 2203 1.659 - - - - 0.813 - - - 0.846 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
39. CASKIN2_1 CASKIN2_1 2299 1.658 - - - - - - - 0.928 0.730
40. ddx39ab ENSDARG00000015111 11619 1.658 - - - - - - - 0.856 0.802 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
41. aldh3b1 ENSDARG00000013839 796 1.652 - - - - - - 0.803 0.849 - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
42. mllt3 ENSDARG00000006754 985 1.652 - - - - - 0.734 - 0.918 - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
43. agpat3 ENSDARG00000036549 1093 1.65 - - - - - 0.745 - 0.905 - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
44. lrp5 ENSDARG00000006921 3522 1.647 - - - - - - 0.728 0.919 - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
45. bcl9 ENSDARG00000036687 1124 1.638 - - - - - - 0.710 0.928 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
46. eif4h ENSDARG00000042252 6742 1.637 - 0.703 - - - - - 0.934 - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
47. CHDH ENSDARG00000100304 2257 1.636 - 0.771 - - - - - 0.865 - choline dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-120111-1]
48. strada ENSDARG00000037929 1614 1.634 0.866 - - - 0.768 - - - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
49. MSL1_1 MSL1_1 2365 1.632 - 0.754 - - 0.878 - - - -
50. CABZ01073174.1 CABZ01073174.1 581 1.631 0.738 - - - - 0.893 - - -
51. ppm1g ENSDARG00000075559 6516 1.629 - - - 0.762 - - - - 0.867 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
52. sp1 ENSDARG00000088347 1697 1.629 - - - - 0.716 - - 0.913 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
53. ppp4cb ENSDARG00000076439 1693 1.628 - - - - 0.839 - - - 0.789 protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
54. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.624 - - - - - - - 0.918 0.706 GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
55. SPAG9 ENSDARG00000078142 629 1.623 - - - - - - 0.707 0.916 - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
56. hat1 ENSDARG00000034916 5712 1.62 - - - - - - 0.749 - 0.871 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
57. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.62 0.894 - 0.726 - - - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
58. mafba ENSDARG00000017121 1215 1.615 0.889 0.726 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
59. ing4 ENSDARG00000030716 5908 1.614 - - - 0.814 0.800 - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
60. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 1.61 - - - - - - 0.719 0.891 - ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
61. rab6bb ENSDARG00000031343 1381 1.608 0.896 - - - - 0.712 - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
62. dgat1a ENSDARG00000103503 63 1.605 0.861 - - - - 0.744 - - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
63. ZBTB39 ENSDARG00000019265 687 1.604 - - - 0.708 - - - 0.896 - zinc finger and BTB domain containing 39 [Source:ZFIN;Acc:ZDB-GENE-130822-1]
64. ap2m1b ENSDARG00000033899 317 1.601 0.844 - - - - - 0.757 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
65. ap2b1 ENSDARG00000035152 2912 1.596 - - - - - - 0.762 0.834 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
66. cwc25 ENSDARG00000003382 2134 1.596 0.876 0.720 - - - - - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
67. ppp1cbl ENSDARG00000102012 2301 1.595 - 0.777 - - - - 0.818 - - protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
68. si:ch211-161h7.4 ENSDARG00000087238 4399 1.593 0.842 - - 0.751 - - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
69. oxsr1a ENSDARG00000034189 4314 1.593 - - - - - - 0.736 0.857 - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
70. arpp19b ENSDARG00000039880 4823 1.588 - - - - - - 0.702 0.886 - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
71. rspry1 ENSDARG00000062558 1424 1.587 0.864 - - - 0.723 - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
72. dscr3 1229 1.586 0.875 0.711 - - - - - - - Down syndrome critical region 3
73. PTDSS2 ENSDARG00000101018 881 1.584 0.829 - - - - 0.755 - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
74. EPHA2 EPHA2 867 1.582 0.849 - - - - - - - 0.733
75. apopt1 ENSDARG00000092473 682 1.582 - - - - - - 0.728 0.854 - apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
76. rnaseh2a ENSDARG00000018891 1979 1.581 0.870 - - - 0.711 - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
77. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 1.581 - - - - 0.764 - 0.817 - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
78. MAP1S_1 MAP1S_1 1117 1.579 - 0.812 - - - - 0.767 - -
79. dnajc25 ENSDARG00000067613, ENSDARG00000111375 1435 1.579 - 0.778 - - - 0.801 - - - DnaJ (Hsp40) homolog, subfamily C , member 25 [Source:ZFIN;Acc:ZDB-GENE-081104-137]
80. seh1l ENSDARG00000004280 2915 1.577 - - - - 0.709 - - 0.868 - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
81. wasf3 wasf3 3287 1.577 - - - 0.808 0.769 - - - -
82. thoc3 ENSDARG00000056517 909 1.577 0.848 - - - 0.729 - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
83. chuk ENSDARG00000011662 1668 1.573 - - - - 0.748 0.825 - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
84. si:dkey-226l10.6 ENSDARG00000087483 1651 1.573 - - - - 0.798 - 0.775 - - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
85. ndfip2 ENSDARG00000033928 3129 1.572 - - - - - - 0.745 - 0.827 Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
86. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.571 - - - - 0.793 - - 0.778 -
87. mcm5 ENSDARG00000019507 6407 1.571 0.799 - - - - - - 0.772 - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
88. mtss1l mtss1l 2494 1.57 - - - - 0.752 - - 0.818 -
89. tbp ENSDARG00000014994 1591 1.569 - - - - - - 0.843 - 0.726 TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
90. SNORD72 SNORD72 4018 1.569 - - - - 0.732 - - 0.837 -
91. cpt1a cpt1a 674 1.568 0.830 - - - 0.738 - - - -
92. tmbim1 tmbim1 1005 1.568 0.760 0.808 - - - - - - -
93. si:ch211-209a2.1 250 1.565 0.861 - - - - 0.704 - - - si:ch211-209a2.1, transcript variant X2
94. mau2 ENSDARG00000042056 2378 1.564 - - - 0.772 - - - - 0.792 MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
95. gne ENSDARG00000099771 617 1.563 0.850 - - - - - 0.713 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
96. si:ch211-229b6.1 ENSDARG00000093422 151 1.561 0.858 - - - - - 0.703 - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
97. zgc:100868 ENSDARG00000004748 2582 1.56 0.759 - - - - 0.801 - - - zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
98. rassf10a 417 1.559 0.800 - - - - 0.759 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
99. acot11b ENSDARG00000042122 235 1.557 0.821 - - - - 0.736 - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
100. PIK3CA_1 PIK3CA_1 4065 1.557 0.807 - - - 0.750 - - - -

There are 1912 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA