Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for srrd

Gene Name Gene ID Reads Annotation
srrd ENSDARG00000059028 173 SRR1 domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-269]










Genes with expression patterns similar to srrd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. srrd ENSDARG00000059028 173 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRR1 domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-269]
2. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 1.634 - - - - 0.860 - 0.774 - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
3. exd2 ENSDARG00000016117 342 1.632 0.763 - - - - - 0.869 - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
4. ly75 ENSDARG00000053113 196 1.625 0.835 - - - 0.790 - - - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
5. DTX3 DTX3 303 1.554 0.743 - - - 0.811 - - - -
6. zgc:152977 ENSDARG00000077178 59 1.525 - 0.759 - - - - 0.766 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
7. grk7b ENSDARG00000055534 17 1.517 0.751 - - - - - 0.766 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
8. dusp16 ENSDARG00000102474 193 1.508 - 0.721 - - 0.787 - - - - dual specificity phosphatase 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2360]
9. grnas ENSDARG00000091885 71 1.506 0.720 - - - - - 0.786 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
10. casp9 ENSDARG00000004325 306 1.505 0.768 - - - 0.737 - - - - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
11. CR677591.1 CR677591.1 19 1.5 - 0.734 - - - - 0.766 - -
12. txnl4b ENSDARG00000058962 296 1.499 0.713 - - - - - 0.786 - - thioredoxin-like 4B [Source:ZFIN;Acc:ZDB-GENE-051030-63]
13. C25H12orf29 C25H12orf29 31 1.492 0.726 - - - - - 0.766 - -
14. si:ch211-86h15.1 ENSDARG00000074098 354 1.489 0.757 - - - - - 0.732 - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
15. CITED1 ENSDARG00000077769 692 1.488 - 0.718 - - - - 0.770 - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
16. UBAP1L UBAP1L 130 1.483 - 0.708 - - - - 0.775 - -
17. samd1a ENSDARG00000102810 1037 1.478 - - - - 0.763 - 0.715 - - sterile alpha motif domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061013-517]
18. PPM1J ENSDARG00000074690 109 1.476 - 0.722 - - - - 0.754 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
19. vil1 ENSDARG00000040466 81 1.464 0.739 0.725 - - - - - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
20. park2 42 1.444 0.721 - - - - - 0.723 - - parkin RBR E3 ubiquitin protein ligase
21. cep70 ENSDARG00000076965 140 1.441 0.737 - - - - - 0.704 - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
22. CT573393.1 CT573393.1 97 0.927 - - - - - 0.927 - - -
23. KCNAB3 KCNAB3 134 0.908 0.908 - - - - - - - -
24. C19H1orf172 C19H1orf172 105 0.891 0.891 - - - - - - - -
25. nsd1b ENSDARG00000060705 88 0.888 0.888 - - - - - - - - nuclear receptor binding SET domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-080519-2]
26. CU207301.10 CU207301.10 67 0.88 - - - - - 0.880 - - -
27. slc25a18 ENSDARG00000070717 787 0.877 - - - - - - 0.877 - - solute carrier family 25 (glutamate carrier), member 18 [Source:ZFIN;Acc:ZDB-GENE-041111-192]
28. ptpn2b ENSDARG00000035986 909 0.875 - - - - - - 0.875 - - protein tyrosine phosphatase, non-receptor type 2, b [Source:ZFIN;Acc:ZDB-GENE-030909-8]
29. C2H5orf22 C2H5orf22 196 0.875 - - - - - - 0.875 - -
30. atxn7l3 ENSDARG00000029331 531 0.874 - - - - - - 0.874 - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
31. ENSDARG00000076126 ENSDARG00000076126 100 0.873 - 0.873 - - - - - - -
32. adra2a ENSDARG00000040841, ENSDARG00000111717, ENSDARG00000114002 44 0.873 - - - - - - 0.873 - - adrenoceptor alpha 2A [Source:ZFIN;Acc:ZDB-GENE-021010-1]
33. dscc1 ENSDARG00000019907 720 0.873 - - - - - - 0.873 - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
34. plcd4a ENSDARG00000057975 241 0.871 - - - - - 0.871 - - - phospholipase C, delta 4a [Source:ZFIN;Acc:ZDB-GENE-050208-654]
35. CR450842.1 CR450842.1 129 0.869 - - - - 0.869 - - - -
36. LRRC29 ENSDARG00000076425 284 0.865 - - - - - 0.865 - - - leucine rich repeat containing 29 [Source:ZFIN;Acc:ZDB-GENE-030131-7165]
37. TMEM182 TMEM182 78 0.864 - - - - - 0.864 - - -
38. RNF219 ENSDARG00000090904 176 0.864 0.864 - - - - - - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
39. zgc:173709 86 0.862 - - - - 0.862 - - - - zgc:173709
40. CIT CIT 212 0.861 - - - - - - 0.861 - -
41. cald1 cald1 147 0.861 - - - - - - 0.861 - -
42. gemin5 ENSDARG00000079257 152 0.859 - 0.859 - - - - - - - gem (nuclear organelle) associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-031112-9]
43. zbtb12.2 ENSDARG00000070658 55 0.859 0.859 - - - - - - - - zinc finger and BTB domain containing 12, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-27]
44. CABZ01076234.1 CABZ01076234.1 49 0.857 - 0.857 - - - - - - -
45. Metazoa_SRP_8 Metazoa_SRP_8 153 0.857 - 0.857 - - - - - - -
46. znf839 ENSDARG00000076988 1032 0.855 - 0.855 - - - - - - - zinc finger protein 839 [Source:ZFIN;Acc:ZDB-GENE-030131-4936]
47. aqp4 ENSDARG00000010565 624 0.852 - - - - - 0.852 - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
48. si:dkey-14o1.14 si:dkey-14o1.14 142 0.851 - 0.851 - - - - - - -
49. ca16b ENSDARG00000060123 389 0.851 - - - - - - 0.851 - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
50. NACC2 160 0.851 0.851 - - - - - - - - NACC family member 2
51. smyd4 ENSDARG00000060983 106 0.85 - - - - 0.850 - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
52. arv1 ENSDARG00000074757 227 0.848 - - - - 0.848 - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:ZFIN;Acc:ZDB-GENE-080204-35]
53. si:ch211-165d12.4 ENSDARG00000079353 330 0.848 - - - - - - 0.848 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
54. mepce ENSDARG00000059461 703 0.847 0.847 - - - - - - - - methylphosphate capping enzyme [Source:ZFIN;Acc:ZDB-GENE-030131-3936]
55. SMC6 ENSDARG00000091821 165 0.844 - - - - 0.844 - - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
56. ddx26b 79 0.843 - - - - 0.843 - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
57. golim4b ENSDARG00000014545 628 0.842 - - - - - 0.842 - - - golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
58. GPATCH3 ENSDARG00000052747 394 0.841 - 0.841 - - - - - - - G patch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070112-902]
59. si:dkey-269d20.3 si:dkey-269d20.3 40 0.84 - 0.840 - - - - - - -
60. klhl23 ENSDARG00000078475 92 0.839 - 0.839 - - - - - - - kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
61. rad51ap1 ENSDARG00000045853 811 0.838 - - - - 0.838 - - - - RAD51 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-050419-96]
62. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 0.838 - - - - 0.838 - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
63. STARD7 ENSDARG00000074858 889 0.838 0.838 - - - - - - - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
64. si:dkey-6n3.3 si:dkey-6n3.3 9 0.838 - - - - - - 0.838 - -
65. ntla ntla 926 0.837 - - - - - 0.837 - - -
66. gstm3 gstm3 1164 0.835 - - - - 0.835 - - - -
67. lppr5a lppr5a 38 0.834 - - - - - - 0.834 - -
68. susd5 ENSDARG00000088277 439 0.834 - - - - - 0.834 - - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
69. dysf ENSDARG00000007370 125 0.834 - 0.834 - - - - - - - dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [Source:ZFIN;Acc:ZDB-GENE-070501-1]
70. gpr88 24 0.833 - - - - 0.833 - - - - G protein-coupled receptor 88
71. pitx3 ENSDARG00000070069 363 0.832 - - - - - 0.832 - - - paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
72. gcnt4a ENSDARG00000035198, ENSDARG00000110336 661 0.832 - - - - 0.832 - - - - glucosaminyl (N-acetyl) transferase 4, core 2, a [Source:ZFIN;Acc:ZDB-GENE-030131-3231]
73. TMEM150A_1 TMEM150A_1 90 0.832 - - - - 0.832 - - - -
74. cadm1b ENSDARG00000042677 277 0.832 0.832 - - - - - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
75. pax6l pax6l 54 0.831 - - - - 0.831 - - - -
76. MAP4K2 ENSDARG00000001234 39 0.831 - - - - 0.831 - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
77. slka ENSDARG00000061525 1678 0.831 - - - - - - 0.831 - - STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
78. si:ch73-196k8.2 si:ch73-196k8.2 427 0.83 - 0.830 - - - - - - -
79. zgc:158852 ENSDARG00000102076 65 0.83 - - - - 0.830 - - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
80. mir457b 21 0.83 - - - - 0.830 - - - - microRNA 457b
81. GTPBP6 ENSDARG00000061091 29 0.829 - - - - 0.829 - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
82. smtla ENSDARG00000038191 42 0.829 - 0.829 - - - - - - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
83. wfikkn2b ENSDARG00000059139 45 0.829 - - - - 0.829 - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
84. grk1a ENSDARG00000058803 13 0.829 - - - - - - 0.829 - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
85. dhrs11b ENSDARG00000031299 409 0.828 - - - - - - 0.828 - - dehydrogenase/reductase (SDR family) member 11b [Source:ZFIN;Acc:ZDB-GENE-040625-155]
86. RBPMS ENSDARG00000099396 61 0.828 - - - - 0.828 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
87. CU694256.1 ENSDARG00000097007 290 0.827 - - - - 0.827 - - - -
88. QSOX2 ENSDARG00000077174 26 0.827 - - - - - - 0.827 - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
89. si:ch211-152c2.3 ENSDARG00000045898 3448 0.827 - 0.827 - - - - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
90. ddx59 ENSDARG00000022177, ENSDARG00000114618 205 0.827 - - - - - - 0.827 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:ZFIN;Acc:ZDB-GENE-050208-665]
91. rapgef5a ENSDARG00000075271 282 0.826 - - - - 0.826 - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
92. CR352249.1 ENSDARG00000114701 857 0.825 - - - - - 0.825 - - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
93. cel.1 ENSDARG00000017490 4 0.825 - - - - - 0.825 - - - carboxyl ester lipase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1201]
94. wisp1b ENSDARG00000076685 38 0.825 - - - - - 0.825 - - - WNT1 inducible signaling pathway protein 1b [Source:ZFIN;Acc:ZDB-GENE-080220-16]
95. zgc:112294 ENSDARG00000010602 23 0.825 - - - - - 0.825 - - - zgc:112294 [Source:ZFIN;Acc:ZDB-GENE-050522-418]
96. CUTA CUTA 1149 0.825 - - - - 0.825 - - - -
97. abhd13 ENSDARG00000059209 43 0.825 - - - - - 0.825 - - - abhydrolase domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-051120-54]
98. scara5 ENSDARG00000010425 84 0.824 - - - - - 0.824 - - - scavenger receptor class A, member 5 (putative) [Source:ZFIN;Acc:ZDB-GENE-041210-258]
99. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 0.824 - - - - 0.824 - - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
100. ucmab ENSDARG00000005485 1808 0.824 - - - - - 0.824 - - - upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]

There are 848 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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