Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spsb1

Gene Name Gene ID Reads Annotation
spsb1 ENSDARG00000056515, ENSDARG00000110015 788 splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]










Genes with expression patterns similar to spsb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
2. hcfc1b ENSDARG00000012519 3633 1.77 - - - - - 0.783 - - 0.987 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
3. WIZ WIZ 1188 1.762 - 0.762 - - - - - - 1.000
4. sox2 ENSDARG00000070913 2763 1.733 - - - - - 0.750 - - 0.983 SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
5. gmps ENSDARG00000079848 8217 1.729 - - - - - 0.738 - - 0.991 guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
6. col4a1 ENSDARG00000055009 3083 1.717 - - - - - 0.723 - - 0.994 collagen, type IV, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081105-114]
7. cdc40 ENSDARG00000041226 514 1.706 - 0.821 - - - - 0.885 - - cell division cycle 40 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050116-3]
8. CR388095.2 ENSDARG00000117604 76 1.702 0.859 - - - - - 0.843 - -
9. si:ch73-103l1.2 ENSDARG00000096505 17 1.693 0.859 - - - - - 0.834 - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
10. waca ENSDARG00000012577 1794 1.667 - 0.786 - - - 0.881 - - - WW domain containing adaptor with coiled-coil a [Source:ZFIN;Acc:ZDB-GENE-030131-2624]
11. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.656 0.842 - - - - - 0.814 - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
12. pknox1.1_1 ENSDARG00000018765 203 1.645 - - - - - 0.739 0.906 - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
13. lhfpl2a ENSDARG00000009653 35 1.621 0.785 - - - - - 0.836 - - LHFPL tetraspan subfamily member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1839]
14. gpr27 ENSDARG00000006607 125 1.605 0.859 - - - - 0.746 - - - G protein-coupled receptor 27 [Source:ZFIN;Acc:ZDB-GENE-071022-3]
15. si:dkey-245p14.4 ENSDARG00000070320 418 1.593 - - - - - 0.722 0.871 - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
16. CR352225.2 CR352225.2 1138 1.583 - 0.771 - - - 0.812 - - -
17. parp6a ENSDARG00000042703 112 1.578 - - - 0.821 - 0.757 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
18. CABZ01038313.1 CABZ01038313.1 79 1.576 0.831 - - - - 0.745 - - -
19. ugt2a4 ENSDARG00000051940 85 1.567 0.714 - 0.853 - - - - - - UDP glucuronosyltransferase 2 family, polypeptide A4 [Source:ZFIN;Acc:ZDB-GENE-080721-23]
20. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 1.566 - - 0.715 - - 0.851 - - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
21. rock2b ENSDARG00000004877, ENSDARG00000096433 135 1.551 0.779 - - 0.772 - - - - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
22. mapkapk5 ENSDARG00000028082 443 1.537 - 0.818 - 0.719 - - - - - mitogen-activated protein kinase-activated protein kinase 5 [Source:ZFIN;Acc:ZDB-GENE-040718-25]
23. hhipl1 ENSDARG00000062501 210 1.534 - 0.759 - - - 0.775 - - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
24. zhx2 zhx2 365 1.53 - 0.803 - - - 0.727 - - -
25. GRB7 ENSDARG00000042726 100 1.521 - 0.747 0.774 - - - - - - growth factor receptor bound protein 7 [Source:ZFIN;Acc:ZDB-GENE-091118-23]
26. lrrcc1 ENSDARG00000078535 118 1.521 - - - 0.762 - - 0.759 - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
27. C12H17orf62_1 C12H17orf62_1 83 1.506 0.735 - - 0.771 - - - - -
28. tpi1a ENSDARG00000025012 562 1.502 0.759 - - 0.743 - - - - - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
29. trpa1b ENSDARG00000031875 39 1.499 - - - 0.767 - - 0.732 - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
30. CABZ01069006.1 CABZ01069006.1 363 1.496 0.732 - - - - - 0.764 - -
31. CR762436.4 CR762436.4 267 1.491 - 0.769 - - - 0.722 - - -
32. nod2 ENSDARG00000010756 294 1.485 0.746 0.739 - - - - - - - nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
33. hsp70l_1 ENSDARG00000055723 72 1.48 - - - 0.743 - 0.737 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
34. DHX36 ENSDARG00000101059 314 1.477 0.745 - - - - 0.732 - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
35. C9H2orf76 C9H2orf76 559 1.472 0.716 - - 0.756 - - - - -
36. si:dkey-22o22.2 ENSDARG00000102445 149 1.47 - - 0.726 - - 0.744 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
37. USP31 ENSDARG00000074017 628 1.466 - 0.721 - - - 0.745 - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
38. LINGO2 LINGO2 300 1.461 - - - 0.738 - 0.723 - - -
39. irf7 ENSDARG00000045661 76 1.46 0.736 - 0.724 - - - - - - interferon regulatory factor 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1518]
40. USP38 ENSDARG00000075798 285 1.459 0.738 0.721 - - - - - - - ubiquitin specific peptidase 38 [Source:ZFIN;Acc:ZDB-GENE-101007-2]
41. SNORA57 SNORA57 148 1.456 - - - 0.737 - 0.719 - - -
42. C7H11orf68 C7H11orf68 446 1.454 - - - 0.748 - - 0.706 - -
43. LYRM9 ENSDARG00000075528 329 1.448 - 0.710 - 0.738 - - - - - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
44. mirlet7a-1 105 1.447 - - 0.743 - - 0.704 - - - microRNA let7a-1
45. CCDC142 ENSDARG00000101377 161 1.439 - - 0.717 - - 0.722 - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
46. gnsa ENSDARG00000023766 545 1.437 - - - 0.715 - 0.722 - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
47. epb41a ENSDARG00000099283 860 1 - - - - - - - - 1.000 erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
48. GTF3C1 GTF3C1 836 1 - - - - - - - - 1.000
49. sugp1 ENSDARG00000075936 826 1 - - - - - - - - 1.000 SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
50. SNAP23_1 SNAP23_1 613 1 - - - - - - - - 1.000
51. TTF1_5 TTF1_5 705 1 - - - - - - - - 1.000
52. cap1 ENSDARG00000016350 891 1 - - - - - - - - 1.000 CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
53. rfx5 ENSDARG00000063258 806 1 - - - - - - - - 1.000 regulatory factor X, 5 [Source:ZFIN;Acc:ZDB-GENE-070717-3]
54. BCL6B ENSDARG00000069335 602 1 - - - - - - - - 1.000 B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
55. CABZ01080492.1 CABZ01080492.1 495 1 - - - - - - - - 1.000
56. spag9a ENSDARG00000074531 1195 0.999 - - - - - - - - 0.999 sperm associated antigen 9a [Source:ZFIN;Acc:ZDB-GENE-070820-7]
57. dcaf6 ENSDARG00000078311 1118 0.999 - - - - - - - - 0.999 ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]
58. cicb ENSDARG00000055502 1356 0.999 - - - - - - - - 0.999 capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
59. ZNF337_25 ZNF337_25 1713 0.999 - - - - - - - - 0.999
60. tlk1b ENSDARG00000100715 1153 0.999 - - - - - - - - 0.999 tousled-like kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4933]
61. MAST2 ENSDARG00000074311, ENSDARG00000109372 1527 0.999 - - - - - - - - 0.999 microtubule associated serine/threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050309-150]
62. carhsp1 ENSDARG00000053129 2100 0.999 - - - - - - - - 0.999 calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
63. snx27b ENSDARG00000016977 2768 0.999 - - - - - - - - 0.999 sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
64. cacna1sb ENSDARG00000042552 1320 0.999 - - - - - - - - 0.999 calcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
65. zgc:110843 ENSDARG00000073845 940 0.999 - - - - - - - - 0.999 zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
66. ptrh1 ENSDARG00000098206, ENSDARG00000110279 1001 0.999 - - - - - - - - 0.999 peptidyl-tRNA hydrolase 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050306-33]
67. ppargc1b ENSDARG00000101569 3452 0.999 - - - - - - - - 0.999 peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
68. tarbp2 ENSDARG00000070471 1946 0.999 - - - - - - - - 0.999 TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
69. fam21c 1768 0.999 - - - - - - - - 0.999 family with sequence similarity 21, member C, transcript variant X6
70. BAX BAX 1673 0.999 - - - - - - - - 0.999
71. nbr1 nbr1 1161 0.999 - - - - - - - - 0.999
72. rgs19 ENSDARG00000077385 783 0.999 - - - - - - - - 0.999 regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
73. gsk3aa ENSDARG00000029501 957 0.999 - - - - - - - - 0.999 glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
74. mycla ENSDARG00000006003 1866 0.998 - - - - - - - - 0.998 MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
75. abcf2a ENSDARG00000038785 2065 0.998 - - - - - - - - 0.998 ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
76. C25H12orf73 C25H12orf73 2031 0.998 - - - - - - - - 0.998
77. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 0.998 - - - - - - - - 0.998 CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
78. rcbtb2 ENSDARG00000090687 1658 0.998 - - - - - - - - 0.998 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
79. grb2a ENSDARG00000105276, ENSDARG00000111933, ENSDARG00000115948 1477 0.998 - - - - - - - - 0.998 growth factor receptor-bound protein 2a [Source:ZFIN;Acc:ZDB-GENE-041121-1]
80. CYHR1 ENSDARG00000061057 2625 0.998 - - - - - - - - 0.998 cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
81. lrrc59 ENSDARG00000071426, ENSDARG00000109955 1998 0.998 - - - - - - - - 0.998 leucine rich repeat containing 59 [Source:ZFIN;Acc:ZDB-GENE-040426-2547]
82. CC2D1A 1262 0.998 - - - - - - - - 0.998 coiled-coil and C2 domain containing 1A, transcript variant X2
83. slc39a10 ENSDARG00000005823 2634 0.998 - - - - - - - - 0.998 solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
84. PRKAR2B ENSDARG00000036446 812 0.998 - - - - - - - - 0.998 protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
85. tmbim4 ENSDARG00000014361 2549 0.997 - - - - - - - - 0.997 transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
86. ZC3H4 ENSDARG00000078355 1888 0.997 - - - - - - - - 0.997 zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
87. pafah1b1a ENSDARG00000032013 3183 0.996 - - - - - - - - 0.996 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
88. csrp2bp 2642 0.995 - - - - - - - - 0.995 csrp2 binding protein
89. plxnb1b ENSDARG00000017211 4676 0.995 - - - - - - - - 0.995 plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
90. tkt tkt 7203 0.995 - - - - - - - - 0.995
91. tshz3a ENSDARG00000087394 2455 0.994 - - - - - - - - 0.994 teashirt zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-100322-1]
92. zgc:100868 ENSDARG00000004748 2582 0.994 - - - - - - - - 0.994 zgc:100868 [Source:ZFIN;Acc:ZDB-GENE-040801-33]
93. NAT16 ENSDARG00000086222 4682 0.994 - - - - - - - - 0.994 N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
94. ncoa4 ENSDARG00000021439 4581 0.994 - - - - - - - - 0.994 nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
95. nsfl1c ENSDARG00000087640 2226 0.993 - - - - - - - - 0.993 NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
96. C19H6orf62 C19H6orf62 2859 0.993 - - - - - - - - 0.993
97. TNRC6C_2 TNRC6C_2 2444 0.993 - - - - - - - - 0.993
98. prtfdc1 ENSDARG00000011683 1534 0.993 - - - - - - - - 0.993 phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
99. zfr ENSDARG00000027109, ENSDARG00000116459 4171 0.992 - - - - - - - - 0.992 zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
100. nhsl1b ENSDARG00000042627 3697 0.992 - - - - - - - - 0.992 NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]

There are 1446 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA