Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for spen

Gene Name Gene ID Reads Annotation
spen ENSDARG00000074245, ENSDARG00000116696 3054 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]










Genes with expression patterns similar to spen

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. spen ENSDARG00000074245, ENSDARG00000116696 3054 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
2. wu:fb12e11 wu:fb12e11 2332 1.991 - 0.992 - - - - 0.999 - -
3. PELP1 ENSDARG00000079313 5771 1.926 - 0.940 - - - - - - 0.986 proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
4. SRGAP3 ENSDARG00000060309 5353 1.924 - 0.977 - - - - - - 0.947 SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
5. purbb ENSDARG00000103546 4983 1.92 - 0.927 - - - - - - 0.993 purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
6. ftr82 ENSDARG00000055647 3302 1.908 - 0.916 - - - - - - 0.992 finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
7. flncb ENSDARG00000018820 5595 1.856 - 0.866 - - - - - - 0.990 filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
8. eaf2 ENSDARG00000010432 3768 1.794 - 0.974 - - - 0.820 - - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
9. elavl1 11672 1.761 - - - - - 0.764 0.997 - - ELAV like RNA binding protein 1, transcript variant X3
10. hoxa10b ENSDARG00000031337 3992 1.754 - 0.983 - - - 0.771 - - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
11. trappc4 ENSDARG00000027418 1491 1.749 - 0.982 - - - 0.767 - - - trafficking protein particle complex 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1734]
12. nucks1a ENSDARG00000078473 28285 1.715 - - - - - 0.726 0.989 - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
13. CORO1C CORO1C 5554 1.713 - - - - - 0.722 - - 0.991
14. mtfr1l ENSDARG00000003940, ENSDARG00000111141 3047 1.688 - - - - - 0.726 - - 0.962 mitochondrial fission regulator 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-6228]
15. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.645 - 0.942 - - - 0.703 - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
16. gmps ENSDARG00000079848 8217 1.575 - 0.843 - - - 0.732 - - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
17. eif2d ENSDARG00000012929 2624 1 - - - - - - 1.000 - - eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
18. sipa1l2 ENSDARG00000061640 4545 1 - - - - - - 1.000 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
19. map3k1 ENSDARG00000098405 3043 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
20. MAST1_1 MAST1_1 1595 1 - - - - - - 1.000 - -
21. mrpl13 ENSDARG00000056903 2768 1 - - - - - - 1.000 - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
22. TMEM45A ENSDARG00000070743 1669 1 - - - - - - 1.000 - - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
23. mid2 ENSDARG00000034871 1001 1 - - - - - - 1.000 - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
24. CRELD1 794 1 - - - - - - 1.000 - - cysteine rich with EGF like domains 1
25. myo10 ENSDARG00000017004 2191 1 - - - - - - 1.000 - - myosin X [Source:ZFIN;Acc:ZDB-GENE-070912-277]
26. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 1 - - - - - - 1.000 - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
27. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 1 - - - - - - 1.000 - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
28. oxr1b ENSDARG00000063310 929 1 - - - - - - 1.000 - - oxidation resistance 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2438]
29. zgc:73340 823 1 - - - - - - 1.000 - - zgc:73340
30. m6pr ENSDARG00000018432 1411 1 - - - - - - 1.000 - - mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
31. TUB ENSDARG00000062165, ENSDARG00000111083 871 1 - - - - - - 1.000 - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
32. lamb2 ENSDARG00000002084 3265 0.999 - - - - - - 0.999 - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
33. aldh9a1b ENSDARG00000037061 2638 0.999 - - - - - - 0.999 - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
34. calb2b ENSDARG00000036344 2417 0.999 - - - - - - 0.999 - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
35. eif5 ENSDARG00000003681 7986 0.999 - - - - - - 0.999 - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
36. rbfox2 ENSDARG00000052182 6621 0.999 - - - - - - 0.999 - - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
37. dcun1d1 ENSDARG00000099642 2043 0.999 - - - - - - 0.999 - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
38. mtp_1 3298 0.999 - - - - - - 0.999 - - microsomal triglyceride transfer protein
39. zc3h18 ENSDARG00000062506 1676 0.998 - - - - - - - - 0.998 zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
40. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 0.998 - - - - - - 0.998 - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
41. psmd14 ENSDARG00000063100 15711 0.998 - - - - - - 0.998 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
42. mcm5 ENSDARG00000019507 6407 0.997 - - - - - - 0.997 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
43. antxr1c ENSDARG00000063612 3203 0.997 - - - - - - - - 0.997 ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
44. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 0.997 - - - - - - 0.997 - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
45. gpt2l ENSDARG00000019541 3397 0.997 - - - - - - 0.997 - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
46. thrap3b ENSDARG00000098228 4396 0.997 - - - - - - 0.997 - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
47. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 0.997 - - - - - - 0.997 - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
48. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 0.997 - - - - - - - - 0.997 zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
49. psmb3 ENSDARG00000013938 10744 0.997 - - - - - - 0.997 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
50. hoxc6a ENSDARG00000070343 2839 0.997 - - - - - - 0.997 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
51. ptpn13 ENSDARG00000103699 2866 0.997 - 0.997 - - - - - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
52. pak2a ENSDARG00000068177 8931 0.997 - - - - - - 0.997 - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
53. ddost ENSDARG00000037318 10904 0.996 - - - - - - 0.996 - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
54. gpia ENSDARG00000012987 4624 0.996 - - - - - - - - 0.996 glucose-6-phosphate isomerase a [Source:ZFIN;Acc:ZDB-GENE-020513-2]
55. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 0.996 - - - - - - - - 0.996 zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
56. PIK3CA_1 PIK3CA_1 4065 0.996 - - - - - - - - 0.996
57. zgc:77262 ENSDARG00000044545 5563 0.995 - - - - - - - - 0.995 zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
58. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 0.995 - - - - - - 0.995 - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
59. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.994 - - - - - - - - 0.994 zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
60. fam26f 595 0.994 - - - - - - - - 0.994 family with sequence similarity 26, member F
61. otub1a ENSDARG00000055536 2892 0.994 - 0.994 - - - - - - - OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
62. ENSDARG00000058255 ENSDARG00000058255 1715 0.994 - - - - - - - - 0.994
63. azi1_1 azi1_1 1375 0.994 - - - - - - - - 0.994
64. hnrnph1l ENSDARG00000005551 8727 0.994 - - - - - - 0.994 - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
65. smo ENSDARG00000002952 6411 0.994 - - - - - - - - 0.994 smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
66. ppap2c ppap2c 1361 0.994 - - - - - - - - 0.994
67. zgc:101130 ENSDARG00000101926 924 0.994 - - - - - - - - 0.994 zgc:101130 [Source:ZFIN;Acc:ZDB-GENE-040801-72]
68. btbd10b ENSDARG00000020252 7251 0.994 - - - - - - - - 0.994 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
69. wdr82 ENSDARG00000014083 3159 0.994 - - - - - - - - 0.994 WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
70. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 0.994 - - - - - - - - 0.994 E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
71. CLSPN 2054 0.994 - - - - - - - - 0.994 claspin
72. CABZ01044136.1 CABZ01044136.1 2596 0.994 - - - - - - - - 0.994
73. ago3b ENSDARG00000063079 1441 0.994 - - - - - - - - 0.994 argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
74. PDGFC ENSDARG00000077588 1064 0.994 - - - - - - - - 0.994 platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
75. pld2 ENSDARG00000034262 952 0.994 - - - - - - - - 0.994 phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
76. trappc6b ENSDARG00000016463 1343 0.994 - - - - - - - - 0.994 trafficking protein particle complex 6b [Source:ZFIN;Acc:ZDB-GENE-041010-122]
77. dnajc8 ENSDARG00000059373 1858 0.994 - - - - - - - - 0.994 DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
78. foxd2 ENSDARG00000058133 1150 0.994 - - - - - - - - 0.994 forkhead box D2 [Source:ZFIN;Acc:ZDB-GENE-980605-6]
79. CR376738.1 ENSDARG00000100433 660 0.994 - - - - - - - - 0.994
80. dgcr14 1608 0.994 - - - - - - - - 0.994 DiGeorge syndrome critical region gene 14
81. azi2 ENSDARG00000102419 1380 0.994 - - - - - - - - 0.994 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
82. cox7a2a ENSDARG00000053217 12564 0.994 - - - - - - 0.994 - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
83. IGFN1 IGFN1 5030 0.994 - - - - - - 0.994 - -
84. serpina10a ENSDARG00000005924 1177 0.994 - - - - - - - - 0.994 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a [Source:ZFIN;Acc:ZDB-GENE-041014-246]
85. NPR2 ENSDARG00000104393 1875 0.993 - - - - - - - - 0.993 natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
86. ap3m1 ENSDARG00000029928 3772 0.993 - - - - - - 0.993 - - adaptor related protein complex 3 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-021015-2]
87. snx16 ENSDARG00000046072 931 0.993 - 0.993 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
88. foxp1a ENSDARG00000004843 3961 0.993 - - - - - - - - 0.993 forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
89. SMARCA1 ENSDARG00000012776 673 0.993 - 0.993 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
90. CU928070.1 CU928070.1 1152 0.993 - 0.993 - - - - - - -
91. fnta ENSDARG00000099143 1845 0.993 - - - - - - - - 0.993 farnesyltransferase, CAAX box, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-866]
92. trpc4apa ENSDARG00000018840 2543 0.993 - 0.993 - - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
93. marcksl1b ENSDARG00000035715 37390 0.993 - - - - - - 0.993 - - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
94. sap30l ENSDARG00000030213 5795 0.993 - - - - - - - - 0.993 sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
95. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.993 - - - - - - - - 0.993 BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
96. slc25a36b ENSDARG00000015915 1750 0.993 - - - - - - - - 0.993 solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
97. myo1c myo1c 4978 0.993 - - - - - - - - 0.993
98. FP236813.1 FP236813.1 1842 0.993 - 0.993 - - - - - - -
99. s100v2 ENSDARG00000070702 8645 0.993 - - - - - - 0.993 - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
100. march5l ENSDARG00000028559 943 0.993 - 0.993 - - - - - - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]

There are 463 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA