Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sox4b

Gene Name Gene ID Reads Annotation
sox4b ENSDARG00000098834 1634 SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]










Genes with expression patterns similar to sox4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox4b ENSDARG00000098834 1634 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]
2. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 2.316 - - - - - 0.807 0.760 0.749 - solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
3. zc3h7b 2936 2.284 - - - - - 0.737 - 0.731 0.816 zinc finger CCCH-type containing 7B
4. vox ENSDARG00000099761 801 1.818 - - - - - 0.854 - - 0.964 ventral homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-1]
5. MICAL2 MICAL2 396 1.784 - - - - - 0.821 - - 0.963
6. elovl6 ENSDARG00000004402, ENSDARG00000114205 2286 1.776 - - - - - 0.809 - - 0.967 ELOVL fatty acid elongase 6 [Source:ZFIN;Acc:ZDB-GENE-030114-1]
7. met ENSDARG00000070903 2088 1.767 - - - - - 0.800 - - 0.967 MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
8. rhov ENSDARG00000070434 808 1.751 - 0.902 - - - 0.849 - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
9. slc30a8 ENSDARG00000100917 761 1.712 - 0.896 - - - 0.816 - - - solute carrier family 30 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060315-10]
10. foxo1a ENSDARG00000099555 288 1.706 - - - - - 0.740 - - 0.966 forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
11. glo1 ENSDARG00000068978 1384 1.696 - - - - - 0.750 - 0.946 - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
12. yth2 yth2 3716 1.695 - - - - - - 0.731 - 0.964
13. hyal2 hyal2 2205 1.691 - - - - - - - 0.734 0.957
14. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 1.691 - - - - - 0.822 - - 0.869 integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
15. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 1.688 - - - - - - - 0.722 0.966 peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
16. abcg4b ENSDARG00000078068 180 1.685 - - - - - 0.720 - - 0.965 ATP-binding cassette, sub-family G (WHITE), member 4b [Source:ZFIN;Acc:ZDB-GENE-080215-10]
17. sult1st1 ENSDARG00000028275 806 1.68 - - - - - 0.800 0.880 - - sulfotransferase family 1, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2144]
18. vps29 ENSDARG00000069521 5599 1.677 - - - 0.731 - - - - 0.946 vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
19. cpvl ENSDARG00000056480 2115 1.668 - 0.822 - - - 0.846 - - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
20. actr2a ENSDARG00000052438 5838 1.641 - - - - - - 0.777 - 0.864 ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
21. adam10a ENSDARG00000053468 9308 1.631 - 0.730 - - - - - - 0.901 ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
22. C6H17orf67 C6H17orf67 687 1.622 0.776 - - - - 0.846 - - -
23. dtnbp1a ENSDARG00000055115 976 1.621 - 0.878 - - - - - 0.743 - dystrobrevin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1036]
24. pqlc2 ENSDARG00000043624 1056 1.617 - - - - - 0.708 - - 0.909 PQ loop repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-050306-4]
25. slc26a11 ENSDARG00000043021 157 1.613 0.807 0.806 - - - - - - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
26. slc38a7 ENSDARG00000012002 2219 1.61 - - - - - 0.876 - 0.734 - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
27. dph5 ENSDARG00000100242, ENSDARG00000115537 537 1.604 - - - - - 0.729 0.875 - - diphthamide biosynthesis 5 [Source:ZFIN;Acc:ZDB-GENE-041114-85]
28. si:ch211-152p11.4 ENSDARG00000079705 2341 1.599 0.772 - - - - - 0.827 - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
29. si:dkey-157l19.2 ENSDARG00000060340 635 1.598 - - - - - 0.867 0.731 - - si:dkey-157l19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-190]
30. tmbim4 ENSDARG00000014361 2549 1.594 - 0.870 - - - - - 0.724 - transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
31. si:dkey-52k20.13 si:dkey-52k20.13 428 1.589 - 0.716 - - - 0.873 - - -
32. mapk3 ENSDARG00000070573 6842 1.588 - - - - - - - 0.767 0.821 mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
33. cad ENSDARG00000041895 4977 1.58 - 0.767 - - - 0.813 - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
34. sh3gl1a ENSDARG00000067958 1105 1.572 - 0.765 - - - - - - 0.807 SH3-domain GRB2-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4524]
35. copg2 ENSDARG00000034823 4162 1.56 - - - - - 0.842 - - 0.718 coatomer protein complex, subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-000208-8]
36. arpc5b ENSDARG00000019062 2786 1.557 - - - - - 0.788 - - 0.769 actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
37. ccdc125 ENSDARG00000056477 158 1.549 - - - - - 0.798 0.751 - - coiled-coil domain containing 125 [Source:ZFIN;Acc:ZDB-GENE-060526-104]
38. pdrg1 ENSDARG00000045017 628 1.546 - - - 0.743 - 0.803 - - - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
39. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.546 - - - - - - 0.815 0.731 - cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
40. tfap2c ENSDARG00000040606 4628 1.537 - 0.801 - - - - - - 0.736 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
41. si:ch211-106k21.5 ENSDARG00000086052 684 1.528 - 0.774 - - - 0.754 - - - si:ch211-106k21.5 [Source:ZFIN;Acc:ZDB-GENE-070912-7]
42. itih2 ENSDARG00000045516 1893 1.523 - 0.753 - - - 0.770 - - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1942]
43. cica ENSDARG00000071150 633 1.519 - - - - - 0.789 0.730 - - capicua transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-060503-700]
44. ddah2 ENSDARG00000105009 4570 1.518 - 0.783 - - - - 0.735 - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
45. XPR1 XPR1 3354 1.515 - 0.701 - - - 0.814 - - -
46. FNIP2 FNIP2 593 1.509 - 0.703 - - - 0.806 - - -
47. naga ENSDARG00000099313 2483 1.507 - 0.717 - - - 0.790 - - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
48. mmp16a 1128 1.495 0.783 - - - - 0.712 - - - matrix metallopeptidase 16a (membrane-inserted)
49. lrrc58a ENSDARG00000076773 1269 1.493 - - - - - 0.751 - 0.742 - leucine rich repeat containing 58a [Source:ZFIN;Acc:ZDB-GENE-090312-76]
50. btbd10b ENSDARG00000020252 7251 1.49 - - - - - 0.783 - 0.707 - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
51. mpp1 ENSDARG00000105287 1359 1.488 - - - - - 0.763 0.725 - - membrane protein, palmitoylated 1 [Source:ZFIN;Acc:ZDB-GENE-031113-4]
52. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 1.48 - 0.723 - - - 0.757 - - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
53. anks1b ENSDARG00000003512 847 1.479 - - - - - - 0.730 0.749 - ankyrin repeat and sterile alpha motif domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-041210-349]
54. SNX2 ENSDARG00000104128 1501 1.476 - 0.723 - - - - 0.753 - - sorting nexin 2 [Source:ZFIN;Acc:ZDB-GENE-051120-45]
55. sec61b ENSDARG00000076568 11859 1.471 - - - - - 0.735 0.736 - - Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
56. si:dkey-221j11.3 ENSDARG00000093304 1001 1.467 - - - 0.727 - - 0.740 - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
57. zgc:112263 zgc:112263 473 1.464 - - - - - 0.727 - 0.737 -
58. snx27b ENSDARG00000016977 2768 1.453 - - - - - 0.707 - 0.746 - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
59. fkbp8 ENSDARG00000001734 1709 1.449 - - - - - 0.706 - 0.743 - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
60. man1b1 man1b1 3294 1.447 0.714 - - - - 0.733 - - -
61. GID4 ENSDARG00000079482 1375 1.441 - - - 0.730 - - - 0.711 - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
62. lrp1b lrp1b 3216 1.44 - 0.710 - - - 0.730 - - -
63. abca4a ENSDARG00000057169 27 1.437 - - - - - 0.720 0.717 - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
64. mcu ENSDARG00000101175 1287 1.425 - - - - - 0.700 - 0.725 - mitochondrial calcium uniporter [Source:ZFIN;Acc:ZDB-GENE-061013-24]
65. bsg ENSDARG00000019881 11894 1.423 - - - - - 0.714 - - 0.709 basigin [Source:ZFIN;Acc:ZDB-GENE-030131-9638]
66. gpc1a ENSDARG00000019341, ENSDARG00000110513 935 0.979 - - - - - - - - 0.979 glypican 1a [Source:ZFIN;Acc:ZDB-GENE-051120-147]
67. TDG TDG 1191 0.979 - - - - - - - - 0.979
68. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 0.979 - - - - - - - - 0.979 glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
69. robo3 ENSDARG00000005645 2818 0.978 - - - - - - - - 0.978 roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
70. gtf2b ENSDARG00000103578 1571 0.977 - - - - - - - - 0.977 general transcription factor IIB [Source:ZFIN;Acc:ZDB-GENE-030131-3544]
71. cept1a ENSDARG00000058716 1686 0.975 - - - - - - - - 0.975 choline/ethanolamine phosphotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-081105-47]
72. C2CD2 ENSDARG00000105000 2573 0.973 - - - - - - - - 0.973 C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
73. thrb ENSDARG00000021163 262 0.972 - - - - - - - - 0.972 thyroid hormone receptor beta [Source:ZFIN;Acc:ZDB-GENE-990415-268]
74. rint1 ENSDARG00000005547 898 0.972 - - - - - - - - 0.972 RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
75. wu:fd44f01 wu:fd44f01 391 0.972 - - - - - - - - 0.972
76. SNORD88 SNORD88 232 0.972 - - - - - - - - 0.972
77. aup1 ENSDARG00000092609 2431 0.972 - - - - - - - - 0.972 ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
78. jhdm1da jhdm1da 512 0.971 - - - - - - - - 0.971
79. sh3bgrl3 ENSDARG00000098075 3071 0.971 - - - - - - - - 0.971 SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
80. C10H11orf30 C10H11orf30 1982 0.971 - - - - - - - - 0.971
81. actr10 ENSDARG00000038432 1598 0.97 - - - - - - - - 0.970 ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
82. FAM110D FAM110D 3632 0.97 - - - - - - - - 0.970
83. arfrp1 ENSDARG00000057857 2840 0.97 - - - - - - - - 0.970 ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
84. si:dkey-219c3.2 ENSDARG00000075805 619 0.97 - - - - - - - - 0.970 si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
85. tchp ENSDARG00000035605 1695 0.969 - - - - - - - - 0.969 trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
86. mapta ENSDARG00000089314 2038 0.969 - - - - - - - - 0.969 microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
87. EHBP1 ENSDARG00000043643 966 0.969 - - - - - - - - 0.969 EH domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091006-4]
88. ndc1 ENSDARG00000021120 2417 0.969 - - - - - - - - 0.969 NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
89. GPR89A ENSDARG00000077983 463 0.969 - - - - - - - - 0.969 G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
90. ZNF337_3 ZNF337_3 561 0.968 - - - - - - - - 0.968
91. arfgef2 ENSDARG00000074702 1593 0.968 - - - - - - - - 0.968 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
92. cited4a ENSDARG00000035990 2762 0.968 - - - - - - - - 0.968 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
93. gli3 ENSDARG00000052131 986 0.968 - - - - - - - - 0.968 GLI family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-041111-162]
94. ift52 ENSDARG00000045025 606 0.968 - - - - - - - - 0.968 intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
95. wipi2 ENSDARG00000037871 425 0.968 - - - - - - - - 0.968 WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
96. rab5ab ENSDARG00000007257 1402 0.967 - - - - - - - - 0.967 RAB5A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040122-3]
97. s100z ENSDARG00000038729 442 0.967 - - - - - - - - 0.967 S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
98. ube2z ENSDARG00000029215 1059 0.967 - - - - - - - - 0.967 ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
99. CITED1 ENSDARG00000077769 692 0.966 - - - - - - - - 0.966 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
100. GTSF1L GTSF1L 2089 0.966 - - - - - - - - 0.966

There are 1255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA