Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sox12

Gene Name Gene ID Reads Annotation
sox12 ENSDARG00000025847 681 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]










Genes with expression patterns similar to sox12

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox12 ENSDARG00000025847 681 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
2. slc17a6b ENSDARG00000041150 823 3.35 0.790 1.000 - - - - 0.791 0.769 - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
3. ebf3 ebf3 4238 3.157 0.706 - - - - - 0.706 0.915 0.830
4. GJD2_1 GJD2_1 3045 3.154 0.725 1.000 - - - 0.708 0.721 - -
5. jph3 ENSDARG00000102204 175 2.656 0.854 1.000 - - - - - - 0.802 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
6. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.651 - 1.000 - - - - 0.765 - 0.886 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
7. scg5 ENSDARG00000032126, ENSDARG00000077045 29 2.571 0.725 1.000 - - - - 0.846 - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
8. slc1a2b ENSDARG00000102453 3136 2.537 - 0.829 - - - - - 0.947 0.761 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
9. csf1b ENSDARG00000068263 248 2.451 0.936 0.714 - - - - 0.801 - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
10. npas3b npas3b 1446 2.314 0.724 - - - - - 0.791 - 0.799
11. nova2 ENSDARG00000017673 7685 2.313 - 0.708 - - - - 0.758 - 0.847 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
12. rtn1b ENSDARG00000021143 1682 2.208 0.713 0.783 - - - - 0.712 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
13. CHL1 CHL1 1553 2.16 - 0.723 - - - - 0.732 - 0.705
14. foxq1a ENSDARG00000030896 121 1.934 - 1.000 - - - - 0.934 - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
15. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.934 - 1.000 - - - - 0.934 - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
16. GRIK3 ENSDARG00000077715 178 1.895 0.895 1.000 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
17. lmx1a ENSDARG00000020354 111 1.895 0.895 1.000 - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
18. RIMS1 RIMS1 9 1.895 0.895 1.000 - - - - - - -
19. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.895 0.895 1.000 - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
20. crispld1a ENSDARG00000077275 7 1.895 0.895 1.000 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
21. NPAS3 ENSDARG00000109820 362 1.877 0.877 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
22. KCNG2 ENSDARG00000035961 58 1.861 0.861 1.000 - - - - - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
23. gnb5b ENSDARG00000055377 98 1.83 0.932 0.898 - - - - - - - guanine nucleotide binding protein (G protein), beta 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1712]
24. calb1 ENSDARG00000031598 252 1.824 - 1.000 - - - - 0.824 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
25. fstl5 ENSDARG00000040198 213 1.813 0.895 - - - - - - 0.918 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
26. phc2b_1 ENSDARG00000013224 1316 1.808 - - - - - - - 0.930 0.878 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
27. tox3 ENSDARG00000073957 3075 1.805 - - - - - 0.892 - - 0.913 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
28. xkr6 xkr6 286 1.798 0.895 - - - - - - 0.903 -
29. KCNAB2 KCNAB2 129 1.797 - 1.000 - - - - 0.797 - -
30. ctnnbip1 ENSDARG00000038954 2519 1.795 - - - - - - - 0.892 0.903 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
31. eef1a1a ENSDARG00000039502 234 1.788 - 0.881 - - - - - 0.907 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
32. rgs7 rgs7 208 1.787 0.841 0.946 - - - - - - -
33. pif1 ENSDARG00000020289 216 1.785 - 1.000 - - - - - - 0.785 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
34. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.78 - - - - - - 0.853 0.927 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
35. GRM2 GRM2 372 1.775 0.863 - - - - - - 0.912 -
36. trim46b ENSDARG00000058649 54 1.773 0.773 1.000 - - - - - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
37. klf5b ENSDARG00000062106 7 1.767 - 1.000 - - 0.767 - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
38. nkx1.2lb ENSDARG00000099427 220 1.766 0.885 0.881 - - - - - - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
39. FAM184A ENSDARG00000014081 34 1.762 - 1.000 - - - 0.762 - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
40. fzd3b ENSDARG00000058692 627 1.761 - - - - - - 0.855 0.906 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
41. CABZ01054405.1 CABZ01054405.1 115 1.755 - 1.000 - - - - - - 0.755
42. LPL_1 LPL_1 1150 1.753 - - - - - - - 0.902 0.851
43. rnft2 ENSDARG00000053019 270 1.75 - 0.822 - - - - 0.928 - - ring finger protein, transmembrane 2 [Source:ZFIN;Acc:ZDB-GENE-050522-168]
44. ncalda ENSDARG00000070688 5069 1.749 - - - - - - - 0.922 0.827 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
45. tmem91 ENSDARG00000068456 81 1.743 0.743 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
46. dock7 ENSDARG00000078675 1995 1.741 - - - - - - - 0.916 0.825 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
47. TRPC4_1 TRPC4_1 212 1.738 0.738 1.000 - - - - - - -
48. KCNS3 KCNS3 82 1.736 - 1.000 - - - - 0.736 - -
49. tagln3a ENSDARG00000079805 123 1.734 - 1.000 - - - - 0.734 - - transgelin 3a [Source:ZFIN;Acc:ZDB-GENE-060531-53]
50. cacna1ab ENSDARG00000006923 12 1.73 - 1.000 - - - - 0.730 - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
51. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.73 - - - - - - 0.829 0.901 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
52. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.729 - 0.943 - - - - - - 0.786 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
53. tekt1 ENSDARG00000101331 27 1.726 - 1.000 - - - - 0.726 - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
54. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.725 - - - - - - - 0.918 0.807 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
55. gucy1b3 92 1.719 - 1.000 - - - - 0.719 - - guanylate cyclase 1, soluble, beta 3
56. si:dkeyp-79c2.1 42 1.717 - 1.000 - - - - 0.717 - - si:dkeyp-79c2.1, transcript variant X2
57. si:ch73-127m5.1 ENSDARG00000060680 253 1.716 - 1.000 - - - 0.716 - - - si:ch73-127m5.1 [Source:ZFIN;Acc:ZDB-GENE-130531-25]
58. nadl1.2 695 1.715 - - - - - - 0.953 - 0.762 neural adhesion molecule L1.2, transcript variant X1
59. BX548000.1 ENSDARG00000099044 45 1.712 - 1.000 - - - 0.712 - - -
60. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1.712 - 1.000 - - - 0.712 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
61. gria2b ENSDARG00000052765 188 1.707 0.895 - - - - - 0.812 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
62. capn1b ENSDARG00000052748, ENSDARG00000117045 320 1.706 0.869 0.837 - - - - - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
63. GANAB_1 GANAB_1 685 1.705 - - - - - - - 0.910 0.795
64. fam219ab ENSDARG00000013813 591 1.704 - 1.000 - - - - 0.704 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
65. si:dkeyp-69c1.7 ENSDARG00000087165 31 1.702 0.983 - - - - 0.719 - - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
66. rbfox3l rbfox3l 34 1.7 - 1.000 - - 0.700 - - - -
67. NPPC ENSDARG00000068126 45 1.7 - 1.000 - - - - 0.700 - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
68. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 1.699 0.790 0.909 - - - - - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
69. NPDC1 NPDC1 126 1.697 0.895 0.802 - - - - - - -
70. penka ENSDARG00000004869 161 1.697 - 0.991 - - - 0.706 - - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
71. pkd2l1 ENSDARG00000022503 372 1.693 - 0.901 - - - - 0.792 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
72. lbx1b ENSDARG00000018611 399 1.692 0.903 0.789 - - - - - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
73. emc3 ENSDARG00000020607 3406 1.688 - - - - - - - 0.903 0.785 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
74. gad2 ENSDARG00000015537 724 1.688 - 0.830 - - - - - - 0.858 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
75. myt1b ENSDARG00000102879 5411 1.686 - - - - - - 0.841 - 0.845 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
76. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.678 - - - - - - - 0.835 0.843 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
77. si:ch211-152f6.6 si:ch211-152f6.6 278 1.669 0.723 0.946 - - - - - - -
78. FBXL3 FBXL3 1769 1.668 - - - - - - - 0.856 0.812
79. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.665 - - - - - - - 0.890 0.775 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
80. si:dkey-92j12.6 211 1.664 0.823 - - - - - 0.841 - - si:dkey-92j12.6
81. CHRNB4 ENSDARG00000101677 128 1.658 - 0.946 - - - - 0.712 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
82. ephb3a ENSDARG00000031548 1872 1.656 - - - - - - 0.767 - 0.889 eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
83. papss1 ENSDARG00000057099 809 1.652 - - - - - - 0.791 - 0.861 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
84. ncana 1537 1.649 0.758 - - - - - 0.891 - - neurocan a
85. fzd3a ENSDARG00000021664 1958 1.646 - - - - - - 0.789 0.857 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
86. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.643 - - - - - - - 0.897 0.746 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
87. fabp7a ENSDARG00000007697 5211 1.641 - - - - - 0.721 0.920 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
88. insm1a ENSDARG00000091756 1838 1.641 - - - - - - 0.768 - 0.873 insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
89. slc6a1b ENSDARG00000039647 1301 1.64 - - - - - - 0.795 0.845 - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
90. syngr3a ENSDARG00000014871 405 1.638 - 0.806 - - - - 0.832 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
91. si:ch211-14c7.2 ENSDARG00000094522 369 1.637 - 0.893 - - - - 0.744 - - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
92. ncam2 ENSDARG00000017466 175 1.637 0.859 - - - - - - - 0.778 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
93. si:ch211-207m11.3 si:ch211-207m11.3 401 1.637 0.801 - - - - - - 0.836 -
94. ptprsb 1085 1.633 - - - - - - 0.755 - 0.878 protein tyrosine phosphatase, receptor type, s, b
95. sox19b ENSDARG00000040266 532 1.63 0.765 - - - - - - 0.865 - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
96. lef1 ENSDARG00000031894 492 1.629 - 0.797 - - - - - - 0.832 lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
97. stx1b ENSDARG00000000503 2724 1.626 - 0.814 - - - - - 0.812 - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
98. neurod neurod 1189 1.625 - 0.816 - - - - - - 0.809
99. scrt2 ENSDARG00000056175 4331 1.625 0.730 0.895 - - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
100. mir219-1 101 1.625 0.895 - - - - - 0.730 - - microRNA 219-1

There are 2068 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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