Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sox11b

Gene Name Gene ID Reads Annotation
sox11b ENSDARG00000095743 8 SRY (sex determining region Y)-box 11b [Source:ZFIN;Acc:ZDB-GENE-980526-466]










Genes with expression patterns similar to sox11b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sox11b ENSDARG00000095743 8 4 - - 1.000 1.000 - - - 1.000 1.000 SRY (sex determining region Y)-box 11b [Source:ZFIN;Acc:ZDB-GENE-980526-466]
2. FGFBP1 FGFBP1 7 1.518 - - 0.769 0.749 - - - - -
3. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.512 - - 0.786 0.726 - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
4. PSKH2 PSKH2 1 1.5 - - 0.769 - - - - 0.731 -
5. si:ch211-285c6.2 ENSDARG00000079234 1 1.5 - - 0.769 - - - - 0.731 - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
6. si:dkey-191j3.2 ENSDARG00000101997 1 1.5 - - 0.769 - - - - 0.731 - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
7. si:dkey-11f4.20 ENSDARG00000100887 38 1.495 - - 0.769 0.726 - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
8. CT025771.1 ENSDARG00000117721 13 1.477 - - - 0.726 - - - - 0.751
9. otomp ENSDARG00000040306 682 1.455 - - 0.742 0.713 - - - - - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
10. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1.447 - - 0.706 0.741 - - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
11. CABZ01044356.1 CABZ01044356.1 36 0.99 - - - 0.990 - - - - -
12. CABZ01045617.2 CABZ01045617.2 13 0.977 - - 0.977 - - - - - -
13. ONECUT3 ONECUT3 2 0.977 - - 0.977 - - - - - -
14. si:ch211-197e7.8 si:ch211-197e7.8 4 0.95 - - - 0.950 - - - - -
15. si:dkey-65b12.13 si:dkey-65b12.13 7 0.95 - - - 0.950 - - - - -
16. si:rp71-18l21.1 si:rp71-18l21.1 2 0.95 - - - 0.950 - - - - -
17. EIF4G3 EIF4G3 24 0.95 - - - 0.950 - - - - -
18. myhb ENSDARG00000001993 11 0.95 - - - 0.950 - - - - - myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1]
19. tatdn2 ENSDARG00000070618 10 0.945 - - - 0.945 - - - - - TatD DNase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081022-51]
20. DNAJC14 ENSDARG00000105398 20 0.944 - - 0.944 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
21. fgfbp2 fgfbp2 14 0.931 - - - 0.931 - - - - -
22. ftr43 ENSDARG00000076106 2 0.93 - - 0.930 - - - - - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
23. zgc:173716 9 0.93 - - 0.930 - - - - - - zgc:173716
24. si:dkey-20i20.7 ENSDARG00000093562 0 0.93 - - 0.930 - - - - - - si:dkey-20i20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-906]
25. fam219b ENSDARG00000104637 3 0.93 - - 0.930 - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
26. si:dkeyp-73d8.8 ENSDARG00000094045 17 0.93 - - 0.930 - - - - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
27. akap10 ENSDARG00000059549 1 0.93 - - 0.930 - - - - - - A kinase (PRKA) anchor protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2535]
28. si:dkey-10g2.4 si:dkey-10g2.4 0 0.93 - - 0.930 - - - - - -
29. PRKCA ENSDARG00000099841 2 0.93 - - 0.930 - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
30. CABZ01074397.1 ENSDARG00000104672 2 0.93 - - 0.930 - - - - - - NACHT, LRR and PYD domains-containing protein 3-like [Source:NCBI gene;Acc:100535428]
31. si:dkey-30f3.2 ENSDARG00000098087 6 0.918 - - - 0.918 - - - - - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
32. ms4a17a.1 ENSDARG00000043798 7 0.909 - - 0.909 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
33. U1_33 U1_33 76 0.856 - - - - - - - - 0.856
34. rhoab ENSDARG00000094673 26 0.849 - - - 0.849 - - - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
35. trh ENSDARG00000006868 31 0.848 - - 0.848 - - - - - - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
36. lzts1 ENSDARG00000075565 23 0.844 - - - - - - - - 0.844 leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
37. dmbx1a ENSDARG00000009922 284 0.832 - - - - - - - - 0.832 diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
38. CABZ01072950.1 ENSDARG00000114879 2 0.825 - - - - - - - - 0.825
39. irx7 ENSDARG00000002601 72 0.823 - - - - - - - - 0.823 iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
40. SDR42E2 ENSDARG00000059914 132 0.822 - - 0.822 - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
41. espnla ENSDARG00000078211 8 0.813 - - 0.813 - - - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
42. ankdd1a ENSDARG00000098647 8 0.812 - - 0.812 - - - - - - ankyrin repeat and death domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-070615-8]
43. AL935186.3 ENSDARG00000109223 19 0.81 - - - - - - - 0.810 -
44. itm1 itm1 32 0.809 - - - - - - - - 0.809
45. si:dkey-30c15.12 ENSDARG00000058546 12 0.806 - - 0.806 - - - - - - si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
46. bend5 ENSDARG00000075624 10 0.797 - - - - - - - - 0.797 BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
47. slc39a4 ENSDARG00000059361 10 0.797 - - - 0.797 - - - - - solute carrier family 39 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-060315-8]
48. rhpn1 ENSDARG00000052454 3 0.797 - - - 0.797 - - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
49. traf7 ENSDARG00000060207 20 0.795 - - 0.795 - - - - - - TNF receptor-associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2212]
50. RNF14 ENSDARG00000043905 41 0.795 - - - - - - - - 0.795 ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
51. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 0.792 - - 0.792 - - - - - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
52. CU179643.1 ENSDARG00000086489 25 0.792 - - - 0.792 - - - - -
53. GPR153 ENSDARG00000087601 48 0.791 - - 0.791 - - - - - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
54. BX255895.1 BX255895.1 29 0.787 - - - - - - - - 0.787
55. PLIN3 PLIN3 29 0.786 - - - - - - - - 0.786
56. polr2b ENSDARG00000098783 90 0.785 - - - - - - - - 0.785 polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
57. gnat1 ENSDARG00000044199 251 0.781 - - - - - - - - 0.781 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
58. si:dkey-222o15.5 si:dkey-222o15.5 27 0.78 - - - - - - - - 0.780
59. zgc:103625 ENSDARG00000038770 17 0.779 - - - - - - - - 0.779 zgc:103625 [Source:ZFIN;Acc:ZDB-GENE-040912-116]
60. CR352265.1 ENSDARG00000062758 39 0.779 - - 0.779 - - - - - -
61. DXO ENSDARG00000036852 16 0.778 - - - - - - - - 0.778 decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
62. si:ch1073-416j23.1 ENSDARG00000055934 4 0.775 - - - - - - - - 0.775 si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]
63. SLC39A14 ENSDARG00000102387 4 0.775 - - - - - - - - 0.775 solute carrier family 39 (zinc transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-060315-2]
64. si:ch211-245j22.3 ENSDARG00000041379, ENSDARG00000110219, ENSDARG00000110924 3 0.775 - - - - - - - - 0.775 si:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
65. ACAP2 ENSDARG00000060783 9 0.775 - - - - - - - - 0.775 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
66. dio3a 19 0.77 - - - - - - - 0.770 - deiodinase, iodothyronine, type IIIa
67. prokr1a ENSDARG00000074182 2 0.769 - - 0.769 - - - - - - prokineticin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-110411-180]
68. CU184872.1 CU184872.1 15 0.769 - - 0.769 - - - - - -
69. csf3r ENSDARG00000045959 4 0.769 - - 0.769 - - - - - - colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
70. 5S_rRNA_10 5S_rRNA_10 2 0.769 - - 0.769 - - - - - -
71. pcdh2g5 1 0.769 - - 0.769 - - - - - - protocadherin 2 gamma 5
72. nup85 ENSDARG00000098679 2 0.769 - - 0.769 - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
73. BX572103.3 BX572103.3 0 0.769 - - 0.769 - - - - - -
74. si:dkey-21o19.6 si:dkey-21o19.6 18 0.769 - - 0.769 - - - - - -
75. sox32 ENSDARG00000100591 2 0.769 - - 0.769 - - - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
76. CABZ01073389.1 CABZ01073389.1 0 0.769 - - 0.769 - - - - - -
77. CR931764.1 CR931764.1 8 0.769 - - 0.769 - - - - - -
78. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 0.769 - - 0.769 - - - - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
79. si:dkey-14i17.1 si:dkey-14i17.1 1 0.769 - - 0.769 - - - - - -
80. si:dkeyp-85d8.5 ENSDARG00000103346 3 0.769 - - 0.769 - - - - - - si:dkeyp-85d8.5 [Source:ZFIN;Acc:ZDB-GENE-110913-144]
81. gabra3 ENSDARG00000090883 0 0.769 - - 0.769 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
82. sh2d4b sh2d4b 1 0.769 - - 0.769 - - - - - -
83. si:dkey-4p15.5 ENSDARG00000086272 7 0.769 - - 0.769 - - - - - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
84. rac1l ENSDARG00000054649, ENSDARG00000096549 2 0.769 - - 0.769 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
85. U1_7 U1_7 0 0.769 - - 0.769 - - - - - -
86. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.769 - - 0.769 - - - - - -
87. SNORA65 SNORA65 1 0.769 - - 0.769 - - - - - -
88. b3gnt9 ENSDARG00000041616 0 0.769 - - 0.769 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
89. SNORD12_1 SNORD12_1 0 0.769 - - 0.769 - - - - - -
90. unc5da ENSDARG00000092722 8 0.769 - - 0.769 - - - - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
91. bricd5 ENSDARG00000056247 1 0.769 - - 0.769 - - - - - - BRICHOS domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-85]
92. ZNF70_7 ZNF70_7 0 0.769 - - 0.769 - - - - - -
93. dlg3 ENSDARG00000076796, ENSDARG00000111101 2 0.769 - - 0.769 - - - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
94. si:ch211-178j18.2 si:ch211-178j18.2 1 0.769 - - 0.769 - - - - - -
95. CABZ01072856.1 CABZ01072856.1 0 0.769 - - 0.769 - - - - - -
96. INPP5A 1 0.769 - - 0.769 - - - - - - inositol polyphosphate-5-phosphatase A
97. slc2a11l ENSDARG00000062873 1 0.769 - - 0.769 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
98. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 0.769 - - 0.769 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
99. SLC4A3 ENSDARG00000104005 2 0.769 - - 0.769 - - - - - - solute carrier family 4 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-141006-1]
100. si:rp71-20i5.5 si:rp71-20i5.5 9 0.769 - - 0.769 - - - - - -

There are 321 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA